Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 17:18:52 (22212): vboxwrapper version 26210
2026-01-10 17:18:52 (22212): BOINC client version: 8.2.8
2026-01-10 17:18:52 (22212): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-10 17:18:53 (22212): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 17:18:53 (22212): Create VM. (boinc_8d4319006293e6c4, slot#0)
2026-01-10 17:18:54 (22212): Setting Memory Size for VM. (4700MB)
2026-01-10 17:18:54 (22212): Setting CPU Count for VM. (7)
2026-01-10 17:18:54 (22212): Setting Chipset Options for VM.
2026-01-10 17:18:54 (22212): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 17:18:55 (22212): Setting Boot Options for VM.
2026-01-10 17:18:55 (22212): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 17:18:55 (22212): Enabling VM Network Access.
2026-01-10 17:18:56 (22212): Disabling USB Support for VM.
2026-01-10 17:18:56 (22212): Disabling COM Port Support for VM.
2026-01-10 17:18:56 (22212): Disabling LPT Port Support for VM.
2026-01-10 17:18:56 (22212): Disabling Audio Support for VM.
2026-01-10 17:18:57 (22212): Disabling Clipboard Support for VM.
2026-01-10 17:18:57 (22212): Disabling Drag and Drop Support for VM.
2026-01-10 17:18:57 (22212): Adding storage controller(s) to VM.
2026-01-10 17:18:57 (22212): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 17:18:58 (22212): Adding VirtualBox Guest Additions to VM.
2026-01-10 17:18:58 (22212): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 17:18:58 (22212): forwarding host port 61459 to guest port 80
2026-01-10 17:18:59 (22212): Enabling remote desktop for VM.
2026-01-10 17:18:59 (22212): Required extension pack not installed, remote desktop not enabled.
2026-01-10 17:18:59 (22212): Enabling shared directory for VM.
2026-01-10 17:18:59 (22212): Starting VM using VBoxManage interface. (boinc_8d4319006293e6c4, slot#0)
2026-01-10 17:19:03 (22212): Successfully started VM. (PID = '23696')
2026-01-10 17:19:03 (22212): Reporting VM Process ID to BOINC.
2026-01-10 17:19:03 (22212): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-10 17:19:03 (22212): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 17:19:03 (22212): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 17:19:03 (22212): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 17:19:03 (22212): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 17:19:03 (22212): Detected: Web Application Enabled (http://localhost:61459)
2026-01-10 17:19:03 (22212): Preference change detected
2026-01-10 17:19:03 (22212): Setting CPU throttle for VM. (100%)
2026-01-10 17:19:04 (22212): Setting checkpoint interval to 3300 seconds. (Higher value of (Preference: 3300 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 17:19:05 (22212): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 17:19:05 (22212): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 17:19:08 (22212): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 17:19:08 (22212): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 17:19:08 (22212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 17:19:14 (22212): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 17:19:14 (22212): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 17:19:17 (22212): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000106 main     Log opened 2026-01-10T17:19:15.685618000Z
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000181 main     OS Product: Linux
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000207 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000251 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000252 main     Process ID: 1353
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000252 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 17:19:17 (22212): Guest Log: 00:00:00.000858 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 17:19:18 (22212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 17:19:18 (22212): Guest Log: [INFO] Mounting shared directory
2026-01-10 17:19:18 (22212): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 17:19:27 (22212): Guest Log: 00:00:10.003319 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 048 456 000ns (GuestNow=1 768 033 167 639 171 000 ns GuestLast=1 768 065 555 687 627 000 ns fSetTimeLastLoop=true )
2026-01-10 17:20:24 (22212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 17:20:24 (22212): Guest Log: [INFO] Detected branch: prod
2026-01-10 17:20:24 (22212): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 17:20:24 (22212): Guest Log: Copying input files
2026-01-10 17:20:25 (22212): Guest Log: Copied input files into RunAtlas.
2026-01-10 17:20:25 (22212): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 17:20:25 (22212): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 17:20:25 (22212): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 17:20:25 (22212): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 17:20:35 (22212): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 17:20:35 (22212): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 17:20:35 (22212): Guest Log: 2.6.3.0 1658 0 30192 154973 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 17:20:35 (22212): Guest Log: copied the webapp to /var/www
2026-01-10 17:20:35 (22212): Guest Log: ATHENA_PROC_NUMBER=7
2026-01-10 17:20:35 (22212): Guest Log: ATHENA_CORE_NUMBER=7
2026-01-10 17:20:35 (22212): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 17:20:35 (22212): Guest Log:  *** Starting ATLAS job. (PandaID=6963155323 taskID=47898826) ***
2026-01-10 18:27:42 (22212): Guest Log:  *** Job finished ***
2026-01-10 18:27:42 (22212): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:07,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:07,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:35,516 | INFO     | [monitor] cgroup control has ended
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:35,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140103648487232)>', '<ExcThread(monitor, started 140103192123136)>']
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:36,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:36,909 | INFO     | [monitor] control thread has ended
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:40,956 | INFO     | all workflow threads have been joined
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:40,956 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:40,956 | INFO     | traces error code: 0
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:40,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,006 [wrapper] ==== pilot stdout END ====
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,009 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,013 [wrapper] pilotpid: 6076
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,016 [wrapper] Pilot exit status: 0
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,071 [wrapper] pandaids: 6963155323
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,093 [wrapper] cleanup supervisor_pilot 21822 6077
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,097 [wrapper] Test setup, not cleaning
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,100 [wrapper] apfmon messages muted
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,103 [wrapper] ==== wrapper stdout END ====
2026-01-10 18:27:42 (22212): Guest Log: 2026-01-10 09:27:41,107 [wrapper] ==== wrapper stderr END ====
2026-01-10 18:27:42 (22212): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 18:27:42 (22212): Guest Log:     "exeErrorCode": 0,
2026-01-10 18:27:42 (22212): Guest Log:     "exeErrorDiag": "",
2026-01-10 18:27:42 (22212): Guest Log:     "pilotErrorCode": 0,
2026-01-10 18:27:42 (22212): Guest Log:     "pilotErrorDiag": "",
2026-01-10 18:27:42 (22212): Guest Log:  *** Listing of results directory ***
2026-01-10 18:27:42 (22212): Guest Log: total 222332
2026-01-10 18:27:42 (22212): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 19:06 pilot3.tar.gz
2026-01-10 18:27:42 (22212): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 19:09 runpilot2-wrapper.sh
2026-01-10 18:27:42 (22212): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 19:11 queuedata.json
2026-01-10 18:27:42 (22212): Guest Log: -rwxr-xr-x. 1 atlas atlas      8961 Jan 10 08:20 init_data.xml
2026-01-10 18:27:42 (22212): Guest Log: -rwxr-xr-x. 1 atlas atlas    592398 Jan 10 08:20 input.tar.gz
2026-01-10 18:27:42 (22212): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 08:20 start_atlas.sh
2026-01-10 18:27:42 (22212): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 08:20 EVNT.47898824._001183.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 18:27:42 (22212): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 10 08:20 pandaJob.out
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas    989548 Jan 10 08:21 agis_schedconf.cvmfs.json
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 08:21 agis_ddmendpoints.agis.ALL.json
2026-01-10 18:27:42 (22212): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 08:21 pilot3
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas 222080348 Jan 10 09:26 HITS.47898826._030573.pool.root.1
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 10 09:26 memory_monitor_summary.json
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas    313447 Jan 10 09:26 log.47898826._030573.job.log.tgz.1
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas      7814 Jan 10 09:26 heartbeat.json
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 09:27 pilot_heartbeat.json
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas      5063 Jan 10 09:27 pilotlog.txt
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas    561085 Jan 10 09:27 log.47898826._030573.job.log.1
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 09:27 output.list
2026-01-10 18:27:42 (22212): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 09:27 runtime_log
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas    890880 Jan 10 09:27 result.tar.gz
2026-01-10 18:27:42 (22212): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Jan 10 09:27 runtime_log.err
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas       650 Jan 10 09:27 aLnNDmMZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgIlKDm5RpxKn.diag
2026-01-10 18:27:42 (22212): Guest Log: Looking for outputfile HITS.47898826._030573.pool.root.1
2026-01-10 18:27:42 (22212): Guest Log: HITS file was successfully produced
2026-01-10 18:27:42 (22212): Guest Log: -rw-------. 1 atlas atlas 222080348 Jan 10 09:26 /home/atlas/RunAtlas/HITS.47898826._030573.pool.root.1
2026-01-10 18:27:43 (22212): Guest Log: Successfully finished the ATLAS job!
2026-01-10 18:27:43 (22212): Guest Log: Copying the results back to the shared directory!
2026-01-10 18:27:43 (22212): Guest Log:  *** Contents of shared directory: ***
2026-01-10 18:27:43 (22212): Guest Log: total 436724
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root 223608031 Jan 10 08:18 ATLAS.root_0
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root 222080348 Jan 10 09:27 HITS.pool.root.1
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root      8961 Jan 10 08:18 init_data.xml
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root    592398 Jan  9 18:05 input.tar.gz
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root    890880 Jan 10 09:27 result.tar.gz
2026-01-10 18:27:43 (22212): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 18:05 start_atlas.sh
2026-01-10 18:27:43 (22212): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 18:27:43 (22212): VM Completion File Detected.
2026-01-10 18:27:43 (22212): Powering off VM.
2026-01-10 18:27:43 (22212): Successfully stopped VM.
2026-01-10 18:27:43 (22212): Deregistering VM. (boinc_8d4319006293e6c4, slot#0)
2026-01-10 18:27:43 (22212): Removing network bandwidth throttle group from VM.
2026-01-10 18:27:43 (22212): Removing VM from VirtualBox.
2026-01-10 18:27:49 (22212): called boinc_finish(0)

</stderr_txt>
]]>

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