Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:56:23 (11197): wrapper (7.7.26015): starting
12:56:23 (11197): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:56:23] Arguments: --nthreads 8
[2026-01-09 12:56:23] Threads: 8
[2026-01-09 12:56:23] Checking for CVMFS
[2026-01-09 12:56:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:56:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:56:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:56:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:56:24] 2.11.2.0 2918 206174 87320 154951 0 59 13031709 20275201 1 130560 0 68494652 99.912 10282383 37494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:56:24] CVMFS is ok
[2026-01-09 12:56:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:56:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:56:24] Further information can be found at the LHC@home message board.
[2026-01-09 12:56:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:56:24] Checking for apptainer binary...
[2026-01-09 12:56:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:56:24] Running /usr/bin/apptainer --version
[2026-01-09 12:56:24] apptainer version 1.3.2-1.el7
[2026-01-09 12:56:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:56:26] c-115-8.aglt2.org
[2026-01-09 12:56:26] apptainer works
[2026-01-09 12:56:26] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:56:26] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:56:26] Starting ATLAS job with PandaID=6963187045
[2026-01-09 12:56:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:41:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:41:04] 2026-01-09 20:39:57,270 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 15:41:04] 2026-01-09 20:39:57,622 | INFO     | monitor loop #722: job 0:6963187045 is in state 'finished'
[2026-01-09 15:41:04] 2026-01-09 20:39:57,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:41:04] 2026-01-09 20:39:59,115 | INFO     | time since job start (9796s) is within the limit (349056.0s)
[2026-01-09 15:41:04] 2026-01-09 20:40:00,125 | INFO     | monitor loop #723: job 0:6963187045 is in state 'finished'
[2026-01-09 15:41:04] 2026-01-09 20:40:00,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:41:04] 2026-01-09 20:40:01,118 | INFO     | time since job start (9798s) is within the limit (349056.0s)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,629 | INFO     | monitor loop #724: job 0:6963187045 is in state 'finished'
[2026-01-09 15:41:04] 2026-01-09 20:40:02,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,726 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 15:41:04] 2026-01-09 20:40:02,729 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,732 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187045/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,733 | INFO     | extracted standard info from prmon json
[2026-01-09 15:41:04] 2026-01-09 20:40:02,733 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:41:04] 2026-01-09 20:40:02,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:41:04] 2026-01-09 20:40:02,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:41:04] 2026-01-09 20:40:02,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:41:04] 2026-01-09 20:40:02,739 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:41:04] 2026-01-09 20:40:02,739 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,740 | INFO     | sum of deviations: 10813051174.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,741 | INFO     | mean x: 1767986282.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,741 | INFO     | mean y: 2517942.375
[2026-01-09 15:41:04] 2026-01-09 20:40:02,741 | INFO     | intersect: -15049881772.183493
[2026-01-09 15:41:04] 2026-01-09 20:40:02,741 | INFO     | chi2: 1.4402544172639815
[2026-01-09 15:41:04] 2026-01-09 20:40:02,742 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,742 | INFO     | sum of deviations: 10397826247.999998
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | mean x: 1767986130.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | mean y: 2517393.4322580644
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | intersect: -15918322253.274803
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | chi2: 1.4414801787827953
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | current chi2=1.4414801787827953 (change=-0.08510729105364373 %)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,743 | INFO     | right removable region: 154
[2026-01-09 15:41:04] 2026-01-09 20:40:02,744 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,744 | INFO     | sum of deviations: -11347027118.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,745 | INFO     | mean x: 1767986435.0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,745 | INFO     | mean y: 2546775.5677419356
[2026-01-09 15:41:04] 2026-01-09 20:40:02,745 | INFO     | intersect: 17376777318.456505
[2026-01-09 15:41:04] 2026-01-09 20:40:02,745 | INFO     | chi2: 0.11115693787689657
[2026-01-09 15:41:04] 2026-01-09 20:40:02,745 | INFO     | current chi2=0.11115693787689657 (change=92.28213178557307 %)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,746 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,746 | INFO     | sum of deviations: -8368854831.499999
[2026-01-09 15:41:04] 2026-01-09 20:40:02,746 | INFO     | mean x: 1767986587.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,747 | INFO     | mean y: 2542516.3666666667
[2026-01-09 15:41:04] 2026-01-09 20:40:02,747 | INFO     | intersect: 14141327884.773983
[2026-01-09 15:41:04] 2026-01-09 20:40:02,747 | INFO     | chi2: 0.09475402503426496
[2026-01-09 15:41:04] 2026-01-09 20:40:02,747 | INFO     | current chi2=0.09475402503426496 (change=14.75653535976082 %)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,747 | INFO     | left removable region: 20
[2026-01-09 15:41:04] 2026-01-09 20:40:02,748 | INFO     | sum of square deviations: 746051197.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,748 | INFO     | sum of deviations: 2858027906.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,748 | INFO     | mean x: 1767986709.5
[2026-01-09 15:41:04] 2026-01-09 20:40:02,748 | INFO     | mean y: 2524074.7985074627
[2026-01-09 15:41:04] 2026-01-09 20:40:02,749 | INFO     | intersect: -6770409701.066262
[2026-01-09 15:41:04] 2026-01-09 20:40:02,749 | INFO     | chi2: 0.0003475927773632262
[2026-01-09 15:41:04] 2026-01-09 20:40:02,749 | INFO     | current memory leak: 3.83 B/s (using 134 data points, chi2=0.00)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,749 | INFO     | could have reported an average CPU frequency of 2193 MHz (9 samples)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | ..............................
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | . Timing measurements:
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | . get job = 0 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | . initial setup = 2 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | . payload setup = 7 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,750 | INFO     | . stage-in = 0 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,751 | INFO     | . payload execution = 9762 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,751 | INFO     | . stage-out = 1 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,751 | INFO     | . log creation = 0 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,751 | INFO     | ..............................
[2026-01-09 15:41:04] 2026-01-09 20:40:02,831 | INFO     | 
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | job summary report
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | --------------------------------------------------
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | PanDA job id: 6963187045
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | task id: 47898826
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | errors: (none)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,832 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | pilot state: finished 
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | transexitcode: 0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | exeerrorcode: 0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | exeerrordiag: 
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | exitcode: 0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | exitmsg: OK
[2026-01-09 15:41:04] 2026-01-09 20:40:02,833 | INFO     | cpuconsumptiontime: 74105 s
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | nevents: 400
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | neventsw: 0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | pid: 21380
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | pgrp: 21380
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | corecount: 8
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | event service: False
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | sizes: {0: 2283799, 1: 2283998, 6: 2284260, 11: 2284288, 9774: 2312792, 9775: 2321790, 9777: 2321974, 9783: 2322232}
[2026-01-09 15:41:04] 2026-01-09 20:40:02,834 | INFO     | --------------------------------------------------
[2026-01-09 15:41:04] 2026-01-09 20:40:02,835 | INFO     | 
[2026-01-09 15:41:04] 2026-01-09 20:40:02,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 15:41:04] 2026-01-09 20:40:02,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,863 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,864 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,867 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:41:04] 2026-01-09 20:40:02,867 | INFO     | job 6963187045 has completed (purged errors)
[2026-01-09 15:41:04] 2026-01-09 20:40:02,867 | INFO     | overall cleanup function is called
[2026-01-09 15:41:04] 2026-01-09 20:40:03,876 | INFO     | --- collectZombieJob: --- 10, [21380]
[2026-01-09 15:41:04] 2026-01-09 20:40:03,876 | INFO     | zombie collector waiting for pid 21380
[2026-01-09 15:41:04] 2026-01-09 20:40:03,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:41:04] 2026-01-09 20:40:03,876 | INFO     | collected zombie processes
[2026-01-09 15:41:04] 2026-01-09 20:40:03,876 | INFO     | will attempt to kill all subprocesses of pid=21380
[2026-01-09 15:41:04] 2026-01-09 20:40:03,959 | INFO     | process IDs to be killed: [21380] (in reverse order)
[2026-01-09 15:41:04] 2026-01-09 20:40:04,016 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:41:04] 2026-01-09 20:40:04,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:41:04] 2026-01-09 20:40:04,021 | INFO     | did not find any defunct processes belonging to 21380
[2026-01-09 15:41:04] 2026-01-09 20:40:04,023 | INFO     | did not find any defunct processes belonging to 21380
[2026-01-09 15:41:04] 2026-01-09 20:40:04,024 | INFO     | ready for new job
[2026-01-09 15:41:04] 2026-01-09 20:40:04,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:41:04] 2026-01-09 20:40:04,025 | INFO     | ***************************************
[2026-01-09 15:41:04] 2026-01-09 20:40:04,025 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:41:04] 2026-01-09 20:40:04,025 | INFO     | ***************************************
[2026-01-09 15:41:04] 2026-01-09 20:40:04,026 | INFO     | 
[2026-01-09 15:41:04] 2026-01-09 20:40:04,026 | INFO     | architecture information:
[2026-01-09 15:41:04] 2026-01-09 20:40:04,027 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:41:04] 2026-01-09 20:40:04,046 | INFO     | cat /etc/os-release:
[2026-01-09 15:41:04] NAME="CentOS Linux"
[2026-01-09 15:41:04] VERSION="7 (Core)"
[2026-01-09 15:41:04] ID="centos"
[2026-01-09 15:41:04] ID_LIKE="rhel fedora"
[2026-01-09 15:41:04] VERSION_ID="7"
[2026-01-09 15:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:41:04] ANSI_COLOR="0;31"
[2026-01-09 15:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:41:04] HOME_URL="https://www.centos.org/"
[2026-01-09 15:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:41:04] 
[2026-01-09 15:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:41:04] 
[2026-01-09 15:41:04] 2026-01-09 20:40:04,047 | INFO     | ***************************************
[2026-01-09 15:41:04] 2026-01-09 20:40:04,550 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 15:41:04] 2026-01-09 20:40:04,571 | INFO     | sufficient remaining disk space (18526240768 B)
[2026-01-09 15:41:04] 2026-01-09 20:40:04,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:41:04] 2026-01-09 20:40:04,571 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:41:04] 2026-01-09 20:40:04,572 | INFO     | update_server=False
[2026-01-09 15:41:04] 2026-01-09 20:40:04,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:41:04] 2026-01-09 20:40:04,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:41:04] 2026-01-09 20:40:04,573 | INFO     | aborting loop
[2026-01-09 15:41:04] 2026-01-09 20:40:04,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:41:04] 2026-01-09 20:40:05,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:41:04] 2026-01-09 20:40:05,541 | INFO     | all data control threads have been joined
[2026-01-09 15:41:04] 2026-01-09 20:40:05,578 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:05,578 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:05,579 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:05,765 | INFO     | all payload control threads have been joined
[2026-01-09 15:41:04] 2026-01-09 20:40:06,050 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,123 | INFO     | all job control threads have been joined
[2026-01-09 15:41:04] 2026-01-09 20:40:06,546 | INFO     | [data] control thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,604 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,770 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,770 | INFO     | [payload] control thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,777 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,826 | INFO     | [job] validate thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:06,856 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:07,013 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:07,129 | INFO     | [job] control thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:07,461 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:07,659 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:41:04] 2026-01-09 20:40:11,665 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:14,648 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:41:04] 2026-01-09 20:40:15,651 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:41:04] 2026-01-09 20:40:34,297 | INFO     | PID=14958 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 15:41:04] 2026-01-09 20:40:34,298 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:41:04] 2026-01-09 20:40:34,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:41:04] 2026-01-09 20:40:34,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:41:04] 2026-01-09 20:40:58,423 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:41:04] 2026-01-09 20:40:59,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760673871680)>', '<ExcThread(monitor, started 139760081286912)>']
[2026-01-09 15:41:04] 2026-01-09 20:41:00,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:41:04] 2026-01-09 20:41:00,410 | INFO     | [monitor] control thread has ended
[2026-01-09 15:41:04] 2026-01-09 20:41:04,585 | INFO     | all workflow threads have been joined
[2026-01-09 15:41:04] 2026-01-09 20:41:04,585 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:41:04] 2026-01-09 20:41:04,585 | INFO     | traces error code: 0
[2026-01-09 15:41:04] 2026-01-09 20:41:04,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:41:04] 2026-01-09 20:41:04,681 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:41:04] 2026-01-09 20:41:04,686 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:41:04] 2026-01-09 20:41:04,691 [wrapper] pilotpid: 14958
[2026-01-09 15:41:04] 2026-01-09 20:41:04,695 [wrapper] Pilot exit status: 0
[2026-01-09 15:41:04] 2026-01-09 20:41:04,714 [wrapper] pandaids: 6963187045
[2026-01-09 15:41:04] 2026-01-09 20:41:04,769 [wrapper] cleanup supervisor_pilot 26360 14959
[2026-01-09 15:41:04] 2026-01-09 20:41:04,774 [wrapper] Test setup, not cleaning
[2026-01-09 15:41:04] 2026-01-09 20:41:04,779 [wrapper] apfmon messages muted
[2026-01-09 15:41:04] 2026-01-09 20:41:04,784 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:41:04] 2026-01-09 20:41:04,788 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:41:04]  *** Error codes and diagnostics ***
[2026-01-09 15:41:04]     "exeErrorCode": 0,
[2026-01-09 15:41:04]     "exeErrorDiag": "",
[2026-01-09 15:41:04]     "pilotErrorCode": 0,
[2026-01-09 15:41:04]     "pilotErrorDiag": "",
[2026-01-09 15:41:04]  *** Listing of results directory ***
[2026-01-09 15:41:04] total 450580
[2026-01-09 15:41:04] -rwx------ 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas       100 Jan  9 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:41:04] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 12:56 run_atlas
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas       105 Jan  9 12:56 job.xml
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas 225949498 Jan  9 12:56 EVNT.47898824._001417.pool.root.1
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:56 start_atlas.sh
[2026-01-09 15:41:04] drwxrwx--x 2 boincer umatlas      4096 Jan  9 12:56 shared
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 12:56 input.tar.gz
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas         0 Jan  9 12:56 boinc_lockfile
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 12:56 pandaJob.out
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas        57 Jan  9 12:56 setup.sh.local
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas    989356 Jan  9 12:56 agis_schedconf.cvmfs.json
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas   1516240 Jan  9 12:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:41:04] drwx------ 5 boincer umatlas      4096 Jan  9 12:56 pilot3
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas      5909 Jan  9 15:36 init_data.xml
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas 228019701 Jan  9 15:39 HITS.47898826._036953.pool.root.1
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas       529 Jan  9 15:39 boinc_task_state.xml
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas      1049 Jan  9 15:39 memory_monitor_summary.json
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas        95 Jan  9 15:39 pilot_heartbeat.json
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas    390437 Jan  9 15:39 log.47898826._036953.job.log.tgz.1
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas      7839 Jan  9 15:40 heartbeat.json
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas        27 Jan  9 15:40 wrapper_checkpoint.txt
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 15:40 boinc_mmap_file
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas      4818 Jan  9 15:41 pilotlog.txt
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas   1365694 Jan  9 15:41 log.47898826._036953.job.log.1
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas       357 Jan  9 15:41 output.list
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas       620 Jan  9 15:41 runtime_log
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas   1771520 Jan  9 15:41 result.tar.gz
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas       659 Jan  9 15:41 WIcLDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE4lKDmJY0JNm.diag
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas      9337 Jan  9 15:41 runtime_log.err
[2026-01-09 15:41:04] -rw-r--r-- 1 boincer umatlas     21387 Jan  9 15:41 stderr.txt
[2026-01-09 15:41:04] HITS file was successfully produced:
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas 228019701 Jan  9 15:39 shared/HITS.pool.root.1
[2026-01-09 15:41:04]  *** Contents of shared directory: ***
[2026-01-09 15:41:04] total 445664
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas 225949498 Jan  9 12:56 ATLAS.root_0
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:56 start_atlas.sh
[2026-01-09 15:41:04] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 12:56 input.tar.gz
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas 228019701 Jan  9 15:39 HITS.pool.root.1
[2026-01-09 15:41:04] -rw------- 1 boincer umatlas   1771520 Jan  9 15:41 result.tar.gz
15:41:06 (11197): run_atlas exited; CPU time 74079.301804
15:41:06 (11197): called boinc_finish(0)

</stderr_txt>
]]>

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