Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:42 (133316): wrapper (7.7.26015): starting
13:40:42 (133316): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:40:42] Arguments: --nthreads 8
[2026-01-09 13:40:42] Threads: 8
[2026-01-09 13:40:42] Checking for CVMFS
[2026-01-09 13:40:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:40:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:40:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:40:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:40:44] 2.13.3.0 9856 23919 199100 154952 0 368 23284521 40960000 19560 16776704 0 28644130 99.736 20387109 40060 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:40:44] CVMFS is ok
[2026-01-09 13:40:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:40:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:40:44] Further information can be found at the LHC@home message board.
[2026-01-09 13:40:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:40:44] Checking for apptainer binary...
[2026-01-09 13:40:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:40:44] Running /usr/bin/apptainer --version
[2026-01-09 13:40:44] apptainer version 1.4.5-2.el9
[2026-01-09 13:40:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:40:45] c-211-33-2.aglt2.org
[2026-01-09 13:40:45] apptainer works
[2026-01-09 13:40:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:40:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:40:45] Starting ATLAS job with PandaID=6963187127
[2026-01-09 13:40:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:36:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:36:11] 2026-01-10 03:35:02,161 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963187127/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,162 | INFO     | extracted standard info from prmon json
[2026-01-09 22:36:11] 2026-01-10 03:35:02,162 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:36:11] 2026-01-10 03:35:02,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:36:11] 2026-01-10 03:35:02,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:36:11] 2026-01-10 03:35:02,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:36:11] 2026-01-10 03:35:02,171 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:36:11] 2026-01-10 03:35:02,172 | INFO     | sum of square deviations: 44105212837.103386
[2026-01-09 22:36:11] 2026-01-10 03:35:02,177 | INFO     | sum of deviations: 140472877136.161
[2026-01-09 22:36:11] 2026-01-10 03:35:02,178 | INFO     | mean x: 1768000127.7816093
[2026-01-09 22:36:11] 2026-01-10 03:35:02,178 | INFO     | mean y: 2485577.641762452
[2026-01-09 22:36:11] 2026-01-10 03:35:02,178 | INFO     | intersect: -5628505607.999997
[2026-01-09 22:36:11] 2026-01-10 03:35:02,179 | INFO     | chi2: 4.572710255684566
[2026-01-09 22:36:11] 2026-01-10 03:35:02,179 | INFO     | sum of square deviations: 42849969019.20321
[2026-01-09 22:36:11] 2026-01-10 03:35:02,185 | INFO     | sum of deviations: 210294205273.76764
[2026-01-09 22:36:11] 2026-01-10 03:35:02,185 | INFO     | mean x: 1767999975.2843328
[2026-01-09 22:36:11] 2026-01-10 03:35:02,186 | INFO     | mean y: 2494009.675048356
[2026-01-09 22:36:11] 2026-01-10 03:35:02,186 | INFO     | intersect: -8674295221.13717
[2026-01-09 22:36:11] 2026-01-10 03:35:02,186 | INFO     | chi2: 2.93977506485562
[2026-01-09 22:36:11] 2026-01-10 03:35:02,186 | INFO     | current chi2=2.93977506485562 (change=35.710445217887184 %)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,187 | INFO     | sum of square deviations: 41618772163.7948
[2026-01-09 22:36:11] 2026-01-10 03:35:02,193 | INFO     | sum of deviations: 206987689603.08597
[2026-01-09 22:36:11] 2026-01-10 03:35:02,193 | INFO     | mean x: 1767999822.7871094
[2026-01-09 22:36:11] 2026-01-10 03:35:02,193 | INFO     | mean y: 2493600.07421875
[2026-01-09 22:36:11] 2026-01-10 03:35:02,193 | INFO     | intersect: -8790514446.802326
[2026-01-09 22:36:11] 2026-01-10 03:35:02,194 | INFO     | chi2: 2.94027469351833
[2026-01-09 22:36:11] 2026-01-10 03:35:02,194 | INFO     | current chi2=2.94027469351833 (change=-0.016995472500017778 %)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,194 | INFO     | right removable region: 511
[2026-01-09 22:36:11] 2026-01-10 03:35:02,195 | INFO     | sum of square deviations: 42849879349.20319
[2026-01-09 22:36:11] 2026-01-10 03:35:02,201 | INFO     | sum of deviations: -893826294.9690323
[2026-01-09 22:36:11] 2026-01-10 03:35:02,201 | INFO     | mean x: 1768000280.2843328
[2026-01-09 22:36:11] 2026-01-10 03:35:02,201 | INFO     | mean y: 2502729.8433268857
[2026-01-09 22:36:11] 2026-01-10 03:35:02,201 | INFO     | intersect: 39382300.19525932
[2026-01-09 22:36:11] 2026-01-10 03:35:02,202 | INFO     | chi2: 1.8499491043485041
[2026-01-09 22:36:11] 2026-01-10 03:35:02,202 | INFO     | current chi2=1.8499491043485041 (change=59.54370601004646 %)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,203 | INFO     | sum of square deviations: 41618719456.060425
[2026-01-09 22:36:11] 2026-01-10 03:35:02,208 | INFO     | sum of deviations: -32647949010.351562
[2026-01-09 22:36:11] 2026-01-10 03:35:02,209 | INFO     | mean x: 1768000432.7792969
[2026-01-09 22:36:11] 2026-01-10 03:35:02,209 | INFO     | mean y: 2506655.0234375
[2026-01-09 22:36:11] 2026-01-10 03:35:02,209 | INFO     | intersect: 1389420734.4101999
[2026-01-09 22:36:11] 2026-01-10 03:35:02,209 | INFO     | chi2: 1.705675352455788
[2026-01-09 22:36:11] 2026-01-10 03:35:02,210 | INFO     | current chi2=1.705675352455788 (change=7.798795737330569 %)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,210 | INFO     | left removable region: 20
[2026-01-09 22:36:11] 2026-01-10 03:35:02,210 | INFO     | sum of square deviations: 36704887938.93276
[2026-01-09 22:36:11] 2026-01-10 03:35:02,216 | INFO     | sum of deviations: 38920331902.72101
[2026-01-09 22:36:11] 2026-01-10 03:35:02,216 | INFO     | mean x: 1768000402.2892058
[2026-01-09 22:36:11] 2026-01-10 03:35:02,216 | INFO     | mean y: 2514745.0794297354
[2026-01-09 22:36:11] 2026-01-10 03:35:02,216 | INFO     | intersect: -1872199123.4310465
[2026-01-09 22:36:11] 2026-01-10 03:35:02,217 | INFO     | chi2: 0.015674687050332113
[2026-01-09 22:36:11] 2026-01-10 03:35:02,217 | INFO     | current memory leak: 1.06 B/s (using 491 data points, chi2=0.02)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,218 | INFO     | could have reported an average CPU frequency of 2691 MHz (21 samples)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,218 | INFO     | ..............................
[2026-01-09 22:36:11] 2026-01-10 03:35:02,218 | INFO     | . Timing measurements:
[2026-01-09 22:36:11] 2026-01-10 03:35:02,218 | INFO     | . get job = 0 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . initial setup = 4 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . payload setup = 38 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . stage-in = 0 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . payload execution = 31854 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . stage-out = 6 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | . log creation = 0 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,219 | INFO     | ..............................
[2026-01-09 22:36:11] 2026-01-10 03:35:02,497 | INFO     | time since job start (31998s) is within the limit (349056.0s)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | 
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | job summary report
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | --------------------------------------------------
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | PanDA job id: 6963187127
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | task id: 47898826
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | errors: (none)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | pilot state: finished 
[2026-01-09 22:36:11] 2026-01-10 03:35:02,840 | INFO     | transexitcode: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | exeerrorcode: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | exeerrordiag: 
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | exitcode: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | exitmsg: OK
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | cpuconsumptiontime: 58411 s
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | nevents: 400
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | neventsw: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | pid: 145819
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | pgrp: 145819
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | corecount: 8
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | event service: False
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | sizes: {0: 2283797, 1: 2283996, 12: 2283996, 23: 2284024, 29: 2284314, 34: 2284342, 31897: 2322786, 31898: 2322785, 31906: 2331839, 31908: 2331895, 31934: 2332089}
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | --------------------------------------------------
[2026-01-09 22:36:11] 2026-01-10 03:35:02,841 | INFO     | 
[2026-01-09 22:36:11] 2026-01-10 03:35:02,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:36:11] 2026-01-10 03:35:02,993 | INFO     | job 6963187127 has completed (purged errors)
[2026-01-09 22:36:11] 2026-01-10 03:35:02,993 | INFO     | overall cleanup function is called
[2026-01-09 22:36:11] 2026-01-10 03:35:04,018 | INFO     | --- collectZombieJob: --- 10, [145819]
[2026-01-09 22:36:11] 2026-01-10 03:35:04,018 | INFO     | zombie collector waiting for pid 145819
[2026-01-09 22:36:11] 2026-01-10 03:35:04,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:36:11] 2026-01-10 03:35:04,018 | INFO     | collected zombie processes
[2026-01-09 22:36:11] 2026-01-10 03:35:04,018 | INFO     | will attempt to kill all subprocesses of pid=145819
[2026-01-09 22:36:11] 2026-01-10 03:35:08,081 | INFO     | PID=137448 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:36:11] 2026-01-10 03:35:08,081 | INFO     | .. there are 16 such processes running
[2026-01-09 22:36:11] 2026-01-10 03:35:08,154 | INFO     | process IDs to be killed: [145819] (in reverse order)
[2026-01-09 22:36:11] 2026-01-10 03:35:08,391 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:36:11] 2026-01-10 03:35:08,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:36:11] 2026-01-10 03:35:08,405 | INFO     | did not find any defunct processes belonging to 145819
[2026-01-09 22:36:11] 2026-01-10 03:35:08,418 | INFO     | did not find any defunct processes belonging to 145819
[2026-01-09 22:36:11] 2026-01-10 03:35:08,418 | INFO     | ready for new job
[2026-01-09 22:36:11] 2026-01-10 03:35:08,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:36:11] 2026-01-10 03:35:08,422 | INFO     | ***************************************
[2026-01-09 22:36:11] 2026-01-10 03:35:08,422 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:36:11] 2026-01-10 03:35:08,422 | INFO     | ***************************************
[2026-01-09 22:36:11] 2026-01-10 03:35:08,422 | INFO     | 
[2026-01-09 22:36:11] 2026-01-10 03:35:08,427 | INFO     | architecture information:
[2026-01-09 22:36:11] 2026-01-10 03:35:08,428 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:36:11] 2026-01-10 03:35:08,448 | INFO     | cat /etc/os-release:
[2026-01-09 22:36:11] NAME="CentOS Linux"
[2026-01-09 22:36:11] VERSION="7 (Core)"
[2026-01-09 22:36:11] ID="centos"
[2026-01-09 22:36:11] ID_LIKE="rhel fedora"
[2026-01-09 22:36:11] VERSION_ID="7"
[2026-01-09 22:36:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:36:11] ANSI_COLOR="0;31"
[2026-01-09 22:36:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:36:11] HOME_URL="https://www.centos.org/"
[2026-01-09 22:36:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:36:11] 
[2026-01-09 22:36:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:36:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:36:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:36:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:36:11] 
[2026-01-09 22:36:11] 2026-01-10 03:35:08,448 | INFO     | ***************************************
[2026-01-09 22:36:11] 2026-01-10 03:35:08,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 22:36:11] 2026-01-10 03:35:09,023 | INFO     | sufficient remaining disk space (127992332288 B)
[2026-01-09 22:36:11] 2026-01-10 03:35:09,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:36:11] 2026-01-10 03:35:09,023 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:36:11] 2026-01-10 03:35:09,023 | INFO     | update_server=False
[2026-01-09 22:36:11] 2026-01-10 03:35:09,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:36:11] 2026-01-10 03:35:09,025 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 22:36:11] 2026-01-10 03:35:09,025 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:36:11] 2026-01-10 03:35:09,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:36:11] 2026-01-10 03:35:09,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:36:11] 2026-01-10 03:35:09,096 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:36:11] 2026-01-10 03:35:09,096 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:36:11] 2026-01-10 03:35:09,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:36:11] 2026-01-10 03:35:09,096 | INFO     | will abort loop
[2026-01-09 22:36:11] 2026-01-10 03:35:09,582 | INFO     | all data control threads have been joined
[2026-01-09 22:36:11] 2026-01-10 03:35:09,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:36:11] 2026-01-10 03:35:09,899 | INFO     | all job control threads have been joined
[2026-01-09 22:36:11] 2026-01-10 03:35:10,030 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,102 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,218 | INFO     | all payload control threads have been joined
[2026-01-09 22:36:11] 2026-01-10 03:35:10,323 | INFO     | [job] validate thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,330 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:36:11] 2026-01-10 03:35:10,562 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,588 | INFO     | [data] control thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,905 | INFO     | [job] control thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:10,943 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:11,058 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:11,119 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:11,123 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:11,224 | INFO     | [payload] control thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:11,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:12,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:36:11] 2026-01-10 03:35:12,547 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:13,037 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:13,712 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:36:11] 2026-01-10 03:35:40,754 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:36:11] 2026-01-10 03:35:42,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661590116160)>', '<ExcThread(monitor, started 140661034571520)>']
[2026-01-09 22:36:11] 2026-01-10 03:35:43,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:36:11] 2026-01-10 03:35:43,229 | INFO     | [monitor] control thread has ended
[2026-01-09 22:36:11] 2026-01-10 03:35:47,565 | INFO     | all workflow threads have been joined
[2026-01-09 22:36:11] 2026-01-10 03:35:47,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:36:11] 2026-01-10 03:35:47,566 | INFO     | traces error code: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:47,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:36:11] 2026-01-10 03:35:49,665 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:36:11] 2026-01-10 03:35:49,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:36:11] 2026-01-10 03:35:49,697 [wrapper] pilotpid: 137448
[2026-01-09 22:36:11] 2026-01-10 03:35:49,713 [wrapper] Pilot exit status: 0
[2026-01-09 22:36:11] 2026-01-10 03:35:49,896 [wrapper] pandaids: 6963187127
[2026-01-09 22:36:11] 2026-01-10 03:35:50,598 [wrapper] cleanup supervisor_pilot 1180759 137449
[2026-01-09 22:36:11] 2026-01-10 03:35:50,617 [wrapper] Test setup, not cleaning
[2026-01-09 22:36:11] 2026-01-10 03:35:50,634 [wrapper] apfmon messages muted
[2026-01-09 22:36:11] 2026-01-10 03:35:50,650 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:36:11] 2026-01-10 03:35:50,698 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:36:11]  *** Error codes and diagnostics ***
[2026-01-09 22:36:11]     "exeErrorCode": 0,
[2026-01-09 22:36:11]     "exeErrorDiag": "",
[2026-01-09 22:36:11]     "pilotErrorCode": 0,
[2026-01-09 22:36:11]     "pilotErrorDiag": "",
[2026-01-09 22:36:11]  *** Listing of results directory ***
[2026-01-09 22:36:11] total 447512
[2026-01-09 22:36:11] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:36:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:40 run_atlas
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:40 job.xml
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas 224448142 Jan  9 13:40 EVNT.47898824._001419.pool.root.1
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:40 start_atlas.sh
[2026-01-09 22:36:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:40 shared
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 13:40 input.tar.gz
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:40 boinc_lockfile
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 13:40 pandaJob.out
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas        57 Jan  9 13:40 setup.sh.local
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas    989372 Jan  9 13:41 agis_schedconf.cvmfs.json
[2026-01-09 22:36:11] drwx------. 5 boincer umatlas      4096 Jan  9 13:41 pilot3
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas      6860 Jan  9 22:30 init_data.xml
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas 220730291 Jan  9 22:32 HITS.47898826._037001.pool.root.1
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:32 boinc_task_state.xml
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas      1042 Jan  9 22:34 memory_monitor_summary.json
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas        95 Jan  9 22:34 pilot_heartbeat.json
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas    665303 Jan  9 22:34 log.47898826._037001.job.log.tgz.1
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas      7830 Jan  9 22:35 heartbeat.json
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas      4739 Jan  9 22:35 pilotlog.txt
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas   3910406 Jan  9 22:35 log.47898826._037001.job.log.1
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas       357 Jan  9 22:35 output.list
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:35 runtime_log
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas   4597760 Jan  9 22:35 result.tar.gz
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 22:35 runtime_log.err
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas       659 Jan  9 22:35 3RJMDmx3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuqgKDmKVjV8n.diag
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:36 wrapper_checkpoint.txt
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:36 boinc_mmap_file
[2026-01-09 22:36:11] -rw-r--r--. 1 boincer umatlas     21228 Jan  9 22:36 stderr.txt
[2026-01-09 22:36:11] HITS file was successfully produced:
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas 220730291 Jan  9 22:32 shared/HITS.pool.root.1
[2026-01-09 22:36:11]  *** Contents of shared directory: ***
[2026-01-09 22:36:11] total 439844
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas 224448142 Jan  9 13:40 ATLAS.root_0
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:40 start_atlas.sh
[2026-01-09 22:36:11] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 13:40 input.tar.gz
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas 220730291 Jan  9 22:32 HITS.pool.root.1
[2026-01-09 22:36:11] -rw-------. 1 boincer umatlas   4597760 Jan  9 22:35 result.tar.gz
22:36:13 (133316): run_atlas exited; CPU time 59554.224067
22:36:13 (133316): called boinc_finish(0)

</stderr_txt>
]]>

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