Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:19 (1034734): wrapper (7.7.26015): starting
17:02:19 (1034734): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 17:02:19] Arguments: --nthreads 9
[2026-01-09 17:02:19] Threads: 9
[2026-01-09 17:02:19] Checking for CVMFS
[2026-01-09 17:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:02:20] 2.13.3.0 12537 93982 384804 154957 1 218 34251150 40960000 14743 16776704 43 377878538 99.603 394420310 37480 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 17:02:20] CVMFS is ok
[2026-01-09 17:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:02:20] Further information can be found at the LHC@home message board.
[2026-01-09 17:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:02:20] Checking for apptainer binary...
[2026-01-09 17:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:02:20] Running /usr/bin/apptainer --version
[2026-01-09 17:02:20] apptainer version 1.4.5-2.el9
[2026-01-09 17:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:02:20] c7-11-14.aglt2.org
[2026-01-09 17:02:20] apptainer works
[2026-01-09 17:02:20] Set ATHENA_PROC_NUMBER=9
[2026-01-09 17:02:20] Set ATHENA_CORE_NUMBER=9
[2026-01-09 17:02:20] Starting ATLAS job with PandaID=6963187035
[2026-01-09 17:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:00:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:00:18] 2026-01-10 02:59:28,726 | INFO     | monitor loop #1168: job 0:6963187035 is in state 'finished'
[2026-01-09 22:00:18] 2026-01-10 02:59:28,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:00:18] 2026-01-10 02:59:30,341 | INFO     | time since job start (17810s) is within the limit (349056.0s)
[2026-01-09 22:00:18] 2026-01-10 02:59:31,234 | INFO     | monitor loop #1169: job 0:6963187035 is in state 'finished'
[2026-01-09 22:00:18] 2026-01-10 02:59:31,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:00:18] 2026-01-10 02:59:32,348 | INFO     | time since job start (17812s) is within the limit (349056.0s)
[2026-01-09 22:00:18] 2026-01-10 02:59:33,739 | INFO     | monitor loop #1170: job 0:6963187035 is in state 'finished'
[2026-01-09 22:00:18] 2026-01-10 02:59:33,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,304 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:00:18] 2026-01-10 02:59:34,309 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.9976250000004
[2026-01-09 22:00:18] 2026-01-10 02:59:34,324 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963187035/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,325 | INFO     | extracted standard info from prmon json
[2026-01-09 22:00:18] 2026-01-10 02:59:34,325 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:00:18] 2026-01-10 02:59:34,325 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:00:18] 2026-01-10 02:59:34,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:00:18] 2026-01-10 02:59:34,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:00:18] 2026-01-10 02:59:34,329 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:00:18] 2026-01-10 02:59:34,345 | INFO     | sum of square deviations: 7720473170.859551
[2026-01-09 22:00:18] 2026-01-10 02:59:34,347 | INFO     | sum of deviations: 85728986028.3186
[2026-01-09 22:00:18] 2026-01-10 02:59:34,347 | INFO     | mean x: 1768005074.9143836
[2026-01-09 22:00:18] 2026-01-10 02:59:34,347 | INFO     | mean y: 2547766.852739726
[2026-01-09 22:00:18] 2026-01-10 02:59:34,347 | INFO     | intersect: -19629575680.89402
[2026-01-09 22:00:18] 2026-01-10 02:59:34,347 | INFO     | chi2: 4.129975423230641
[2026-01-09 22:00:18] 2026-01-10 02:59:34,348 | INFO     | sum of square deviations: 7330644127.658582
[2026-01-09 22:00:18] 2026-01-10 02:59:34,349 | INFO     | sum of deviations: 106997483954.24377
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | mean x: 1768004922.4146342
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | mean y: 2555964.275261324
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | intersect: -25803099722.015114
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | chi2: 3.1518347063588896
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | current chi2=3.1518347063588896 (change=23.683935535543895 %)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,350 | INFO     | right removable region: 286
[2026-01-09 22:00:18] 2026-01-10 02:59:34,351 | INFO     | sum of square deviations: 7330605699.98602
[2026-01-09 22:00:18] 2026-01-10 02:59:34,352 | INFO     | sum of deviations: 5603311023.104557
[2026-01-09 22:00:18] 2026-01-10 02:59:34,352 | INFO     | mean x: 1768005227.4216027
[2026-01-09 22:00:18] 2026-01-10 02:59:34,353 | INFO     | mean y: 2579038.337979094
[2026-01-09 22:00:18] 2026-01-10 02:59:34,353 | INFO     | intersect: -1348834962.791128
[2026-01-09 22:00:18] 2026-01-10 02:59:34,353 | INFO     | chi2: 1.409055160731877
[2026-01-09 22:00:18] 2026-01-10 02:59:34,353 | INFO     | current chi2=1.409055160731877 (change=65.88223860107975 %)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,353 | INFO     | sum of square deviations: 6954087316.581503
[2026-01-09 22:00:18] 2026-01-10 02:59:34,355 | INFO     | sum of deviations: -17352161862.397163
[2026-01-09 22:00:18] 2026-01-10 02:59:34,355 | INFO     | mean x: 1768005379.929078
[2026-01-09 22:00:18] 2026-01-10 02:59:34,355 | INFO     | mean y: 2588325.780141844
[2026-01-09 22:00:18] 2026-01-10 02:59:34,355 | INFO     | intersect: 4414197517.538095
[2026-01-09 22:00:18] 2026-01-10 02:59:34,356 | INFO     | chi2: 1.1977005654500084
[2026-01-09 22:00:18] 2026-01-10 02:59:34,356 | INFO     | current chi2=1.1977005654500084 (change=14.99973891526639 %)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,356 | INFO     | left removable region: 20
[2026-01-09 22:00:18] 2026-01-10 02:59:34,356 | INFO     | sum of square deviations: 5836248401.037624
[2026-01-09 22:00:18] 2026-01-10 02:59:34,358 | INFO     | sum of deviations: -17845682144.864674
[2026-01-09 22:00:18] 2026-01-10 02:59:34,358 | INFO     | mean x: 1768005501.9398496
[2026-01-09 22:00:18] 2026-01-10 02:59:34,358 | INFO     | mean y: 2607660.3834586465
[2026-01-09 22:00:18] 2026-01-10 02:59:34,358 | INFO     | intersect: 5408694250.59456
[2026-01-09 22:00:18] 2026-01-10 02:59:34,358 | INFO     | chi2: 0.04024431955934742
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | current memory leak: -3.06 B/s (using 266 data points, chi2=0.04)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | could have reported an average CPU frequency of 3291 MHz (13 samples)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | ..............................
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | . Timing measurements:
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | . get job = 0 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | . initial setup = 2 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,359 | INFO     | . payload setup = 11 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,360 | INFO     | . stage-in = 0 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,360 | INFO     | . payload execution = 17759 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,360 | INFO     | . stage-out = 2 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,360 | INFO     | . log creation = 0 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,360 | INFO     | ..............................
[2026-01-09 22:00:18] 2026-01-10 02:59:34,369 | INFO     | time since job start (17814s) is within the limit (349056.0s)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,805 | INFO     | 
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | job summary report
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | --------------------------------------------------
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | PanDA job id: 6963187035
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | task id: 47898826
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | errors: (none)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | pilot state: finished 
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | transexitcode: 0
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | exeerrorcode: 0
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | exeerrordiag: 
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | exitcode: 0
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | exitmsg: OK
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | cpuconsumptiontime: 46142 s
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | nevents: 400
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | neventsw: 0
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | pid: 1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | pgrp: 1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | corecount: 9
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | event service: False
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | sizes: {0: 2283970, 7: 2284232, 11: 2284260, 17775: 2317006, 17779: 2326060, 17796: 2326198}
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | --------------------------------------------------
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | 
[2026-01-09 22:00:18] 2026-01-10 02:59:34,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:00:18] 2026-01-10 02:59:34,892 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,892 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,892 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,892 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:00:18] 2026-01-10 02:59:34,893 | INFO     | job 6963187035 has completed (purged errors)
[2026-01-09 22:00:18] 2026-01-10 02:59:34,894 | INFO     | overall cleanup function is called
[2026-01-09 22:00:18] 2026-01-10 02:59:35,929 | INFO     | --- collectZombieJob: --- 10, [1045625]
[2026-01-09 22:00:18] 2026-01-10 02:59:35,929 | INFO     | zombie collector waiting for pid 1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:35,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:00:18] 2026-01-10 02:59:35,929 | INFO     | collected zombie processes
[2026-01-09 22:00:18] 2026-01-10 02:59:35,929 | INFO     | will attempt to kill all subprocesses of pid=1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:36,884 | INFO     | process IDs to be killed: [1045625] (in reverse order)
[2026-01-09 22:00:18] 2026-01-10 02:59:37,077 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:00:18] 2026-01-10 02:59:37,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:00:18] 2026-01-10 02:59:37,090 | INFO     | did not find any defunct processes belonging to 1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:37,102 | INFO     | did not find any defunct processes belonging to 1045625
[2026-01-09 22:00:18] 2026-01-10 02:59:37,103 | INFO     | ready for new job
[2026-01-09 22:00:18] 2026-01-10 02:59:37,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:00:18] 2026-01-10 02:59:37,105 | INFO     | ***************************************
[2026-01-09 22:00:18] 2026-01-10 02:59:37,106 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:00:18] 2026-01-10 02:59:37,106 | INFO     | ***************************************
[2026-01-09 22:00:18] 2026-01-10 02:59:37,106 | INFO     | 
[2026-01-09 22:00:18] 2026-01-10 02:59:37,112 | INFO     | architecture information:
[2026-01-09 22:00:18] 2026-01-10 02:59:37,112 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:00:18] 2026-01-10 02:59:37,142 | INFO     | cat /etc/os-release:
[2026-01-09 22:00:18] NAME="CentOS Linux"
[2026-01-09 22:00:18] VERSION="7 (Core)"
[2026-01-09 22:00:18] ID="centos"
[2026-01-09 22:00:18] ID_LIKE="rhel fedora"
[2026-01-09 22:00:18] VERSION_ID="7"
[2026-01-09 22:00:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:00:18] ANSI_COLOR="0;31"
[2026-01-09 22:00:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:00:18] HOME_URL="https://www.centos.org/"
[2026-01-09 22:00:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:00:18] 
[2026-01-09 22:00:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:00:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:00:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:00:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:00:18] 
[2026-01-09 22:00:18] 2026-01-10 02:59:37,142 | INFO     | ***************************************
[2026-01-09 22:00:18] 2026-01-10 02:59:37,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:00:18] 2026-01-10 02:59:37,699 | INFO     | sufficient remaining disk space (85331017728 B)
[2026-01-09 22:00:18] 2026-01-10 02:59:37,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:00:18] 2026-01-10 02:59:37,700 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:00:18] 2026-01-10 02:59:37,700 | INFO     | update_server=False
[2026-01-09 22:00:18] 2026-01-10 02:59:37,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:00:18] 2026-01-10 02:59:37,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:00:18] 2026-01-10 02:59:37,701 | INFO     | aborting loop
[2026-01-09 22:00:18] 2026-01-10 02:59:37,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:00:18] 2026-01-10 02:59:37,824 | INFO     | all data control threads have been joined
[2026-01-09 22:00:18] 2026-01-10 02:59:38,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:00:18] 2026-01-10 02:59:38,593 | INFO     | all payload control threads have been joined
[2026-01-09 22:00:18] 2026-01-10 02:59:38,705 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:38,707 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:38,831 | INFO     | [data] control thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:38,840 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,009 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,042 | INFO     | all job control threads have been joined
[2026-01-09 22:00:18] 2026-01-10 02:59:39,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,584 | INFO     | [job] validate thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,595 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,599 | INFO     | [payload] control thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,688 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:00:18] 2026-01-10 02:59:39,838 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:39,959 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:40,048 | INFO     | [job] control thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:40,242 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:40,836 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:00:18] 2026-01-10 02:59:41,711 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:00:18] 2026-01-10 03:00:08,271 | INFO     | PID=1039131 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:00:18] 2026-01-10 03:00:08,271 | INFO     | .. there are 10 such processes running
[2026-01-09 22:00:18] 2026-01-10 03:00:08,272 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:00:18] 2026-01-10 03:00:08,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:00:18] 2026-01-10 03:00:08,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:00:18] 2026-01-10 03:00:10,610 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:00:18] 2026-01-10 03:00:11,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249421104960)>', '<ExcThread(monitor, started 140249147610880)>']
[2026-01-09 22:00:18] 2026-01-10 03:00:12,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:00:18] 2026-01-10 03:00:12,305 | INFO     | [monitor] control thread has ended
[2026-01-09 22:00:18] 2026-01-10 03:00:16,872 | INFO     | all workflow threads have been joined
[2026-01-09 22:00:18] 2026-01-10 03:00:16,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:00:18] 2026-01-10 03:00:16,872 | INFO     | traces error code: 0
[2026-01-09 22:00:18] 2026-01-10 03:00:16,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:00:18] 2026-01-10 03:00:17,220 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:00:18] 2026-01-10 03:00:17,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:00:18] 2026-01-10 03:00:17,304 [wrapper] pilotpid: 1039131
[2026-01-09 22:00:18] 2026-01-10 03:00:17,350 [wrapper] Pilot exit status: 0
[2026-01-09 22:00:18] 2026-01-10 03:00:17,523 [wrapper] pandaids: 6963187035
[2026-01-09 22:00:18] 2026-01-10 03:00:18,367 [wrapper] cleanup supervisor_pilot 1578664 1039132
[2026-01-09 22:00:18] 2026-01-10 03:00:18,435 [wrapper] Test setup, not cleaning
[2026-01-09 22:00:18] 2026-01-10 03:00:18,476 [wrapper] apfmon messages muted
[2026-01-09 22:00:18] 2026-01-10 03:00:18,520 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:00:18] 2026-01-10 03:00:18,550 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:00:18]  *** Error codes and diagnostics ***
[2026-01-09 22:00:18]     "exeErrorCode": 0,
[2026-01-09 22:00:18]     "exeErrorDiag": "",
[2026-01-09 22:00:18]     "pilotErrorCode": 0,
[2026-01-09 22:00:18]     "pilotErrorDiag": "",
[2026-01-09 22:00:18]  *** Listing of results directory ***
[2026-01-09 22:00:18] total 449144
[2026-01-09 22:00:18] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:00:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:02 run_atlas
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:02 job.xml
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 17:02 EVNT.47898824._001416.pool.root.1
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:02 start_atlas.sh
[2026-01-09 22:00:18] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:02 shared
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 17:02 input.tar.gz
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:02 boinc_lockfile
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 17:02 pandaJob.out
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas        57 Jan  9 17:02 setup.sh.local
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas    989398 Jan  9 17:02 agis_schedconf.cvmfs.json
[2026-01-09 22:00:18] drwx------. 5 boincer umatlas      4096 Jan  9 17:02 pilot3
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas 223014648 Jan  9 21:58 HITS.47898826._036943.pool.root.1
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:58 boinc_task_state.xml
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas      1028 Jan  9 21:59 memory_monitor_summary.json
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas    533668 Jan  9 21:59 log.47898826._036943.job.log.tgz.1
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas      7778 Jan  9 21:59 heartbeat.json
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas      6903 Jan  9 22:00 init_data.xml
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:00 boinc_mmap_file
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:00 wrapper_checkpoint.txt
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas        95 Jan  9 22:00 pilot_heartbeat.json
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas      4824 Jan  9 22:00 pilotlog.txt
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas   2377255 Jan  9 22:00 log.47898826._036943.job.log.1
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas       357 Jan  9 22:00 output.list
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:00 runtime_log
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas   2928640 Jan  9 22:00 result.tar.gz
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 22:00 runtime_log.err
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas       656 Jan  9 22:00 CaRLDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm53lKDm7EIeVo.diag
[2026-01-09 22:00:18] -rw-r--r--. 1 boincer umatlas     21138 Jan  9 22:00 stderr.txt
[2026-01-09 22:00:18] HITS file was successfully produced:
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas 223014648 Jan  9 21:58 shared/HITS.pool.root.1
[2026-01-09 22:00:18]  *** Contents of shared directory: ***
[2026-01-09 22:00:18] total 443100
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 17:02 ATLAS.root_0
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:02 start_atlas.sh
[2026-01-09 22:00:18] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 17:02 input.tar.gz
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas 223014648 Jan  9 21:58 HITS.pool.root.1
[2026-01-09 22:00:18] -rw-------. 1 boincer umatlas   2928640 Jan  9 22:00 result.tar.gz
22:00:40 (1034734): run_atlas exited; CPU time 46441.063176
22:00:40 (1034734): called boinc_finish(0)

</stderr_txt>
]]>

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