Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:50 (24779): wrapper (7.7.26015): starting
16:59:50 (24779): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 16:59:50] Arguments: --nthreads 8
[2026-01-10 16:59:50] Threads: 8
[2026-01-10 16:59:50] Checking for CVMFS
[2026-01-10 16:59:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:59:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:59:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:59:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:59:53] 2.11.2.0 31595 37065 123180 154984 0 85 22932771 25165824 96 130560 0 17167667 99.823 9536072 2872 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 16:59:53] CVMFS is ok
[2026-01-10 16:59:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:59:53] Checking for apptainer binary...
[2026-01-10 16:59:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:59:53] Running /usr/bin/apptainer --version
[2026-01-10 16:59:53] apptainer version 1.3.2-1.el7
[2026-01-10 16:59:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 17:00:08] cg-vwn421.simple-grid.lan
[2026-01-10 17:00:08] apptainer works
[2026-01-10 17:00:08] Set ATHENA_PROC_NUMBER=8
[2026-01-10 17:00:08] Set ATHENA_CORE_NUMBER=8
[2026-01-10 17:00:08] Starting ATLAS job with PandaID=6963187011
[2026-01-10 17:00:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:07:44]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:07:44] 2026-01-10 22:06:38,615 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6963187011/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,619 | INFO     | extracted standard info from prmon json
[2026-01-10 23:07:44] 2026-01-10 22:06:38,619 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:07:44] 2026-01-10 22:06:38,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:07:44] 2026-01-10 22:06:38,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:07:44] 2026-01-10 22:06:38,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:07:44] 2026-01-10 22:06:38,627 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:07:44] 2026-01-10 22:06:38,628 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,632 | INFO     | sum of deviations: 138614927094.00003
[2026-01-10 23:07:44] 2026-01-10 22:06:38,632 | INFO     | mean x: 1768072160.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,633 | INFO     | mean y: 2463317.472463768
[2026-01-10 23:07:44] 2026-01-10 22:06:38,633 | INFO     | intersect: -19245196142.27808
[2026-01-10 23:07:44] 2026-01-10 22:06:38,633 | INFO     | chi2: 9.553347382458064
[2026-01-10 23:07:44] 2026-01-10 22:06:38,634 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,638 | INFO     | sum of deviations: 159320115065.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,638 | INFO     | mean x: 1768072007.5
[2026-01-10 23:07:44] 2026-01-10 22:06:38,638 | INFO     | mean y: 2469029.6470588236
[2026-01-10 23:07:44] 2026-01-10 22:06:38,638 | INFO     | intersect: -23110681169.932243
[2026-01-10 23:07:44] 2026-01-10 22:06:38,639 | INFO     | chi2: 8.851831894791546
[2026-01-10 23:07:44] 2026-01-10 22:06:38,639 | INFO     | current chi2=8.851831894791546 (change=7.343138060222181 %)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,639 | INFO     | right removable region: 339
[2026-01-10 23:07:44] 2026-01-10 22:06:38,640 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,644 | INFO     | sum of deviations: 15871964814.50002
[2026-01-10 23:07:44] 2026-01-10 22:06:38,644 | INFO     | mean x: 1768072312.5
[2026-01-10 23:07:44] 2026-01-10 22:06:38,644 | INFO     | mean y: 2497609.4264705884
[2026-01-10 23:07:44] 2026-01-10 22:06:38,644 | INFO     | intersect: -2300106615.1166506
[2026-01-10 23:07:44] 2026-01-10 22:06:38,645 | INFO     | chi2: 4.466677338821249
[2026-01-10 23:07:44] 2026-01-10 22:06:38,645 | INFO     | current chi2=4.466677338821249 (change=53.244897730579765 %)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,646 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,649 | INFO     | sum of deviations: -82464605763.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,650 | INFO     | mean x: 1768072465.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,650 | INFO     | mean y: 2525893.080597015
[2026-01-10 23:07:44] 2026-01-10 22:06:38,650 | INFO     | intersect: 12509684941.267612
[2026-01-10 23:07:44] 2026-01-10 22:06:38,651 | INFO     | chi2: 1.3789990081961543
[2026-01-10 23:07:44] 2026-01-10 22:06:38,651 | INFO     | current chi2=1.3789990081961543 (change=69.12696164079605 %)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,651 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 23:07:44] 2026-01-10 22:06:38,655 | INFO     | sum of deviations: -105895506388.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,655 | INFO     | mean x: 1768072617.5
[2026-01-10 23:07:44] 2026-01-10 22:06:38,655 | INFO     | mean y: 2532795.496969697
[2026-01-10 23:07:44] 2026-01-10 22:06:38,655 | INFO     | intersect: 16804548027.710342
[2026-01-10 23:07:44] 2026-01-10 22:06:38,656 | INFO     | chi2: 1.049783410973089
[2026-01-10 23:07:44] 2026-01-10 22:06:38,656 | INFO     | current chi2=1.049783410973089 (change=23.87351950700144 %)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,656 | INFO     | left removable region: 30
[2026-01-10 23:07:44] 2026-01-10 22:06:38,657 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,660 | INFO     | sum of deviations: -58788526984.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,660 | INFO     | mean x: 1768072892.0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,660 | INFO     | mean y: 2532145.4595469255
[2026-01-10 23:07:44] 2026-01-10 22:06:38,660 | INFO     | intersect: 11364235093.503473
[2026-01-10 23:07:44] 2026-01-10 22:06:38,661 | INFO     | chi2: 0.23446432891544083
[2026-01-10 23:07:44] 2026-01-10 22:06:38,661 | INFO     | current memory leak: -6.43 B/s (using 309 data points, chi2=0.23)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,661 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | ..............................
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . Timing measurements:
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . get job = 0 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . initial setup = 9 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . payload setup = 157 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . stage-in = 0 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . payload execution = 21194 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . stage-out = 5 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | . log creation = 1 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,662 | INFO     | ..............................
[2026-01-10 23:07:44] 2026-01-10 22:06:38,795 | INFO     | 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | job summary report
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | --------------------------------------------------
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | PanDA job id: 6963187011
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | task id: 47898826
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | errors: (none)
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | pilot state: finished 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | transexitcode: 0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | exeerrorcode: 0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,796 | INFO     | exeerrordiag: 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | exitcode: 0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | exitmsg: OK
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | cpuconsumptiontime: 79382 s
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | nevents: 400
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | neventsw: 0
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | pid: 2614
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | pgrp: 2614
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | corecount: 8
[2026-01-10 23:07:44] 2026-01-10 22:06:38,797 | INFO     | event service: False
[2026-01-10 23:07:44] 2026-01-10 22:06:38,798 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 33: 2284055, 44: 2284111, 55: 2284267, 66: 2284295, 76: 2284323, 87: 2284379, 98: 2284407, 108: 2284715, 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,798 | INFO     | --------------------------------------------------
[2026-01-10 23:07:44] 2026-01-10 22:06:38,798 | INFO     | 
[2026-01-10 23:07:44] 2026-01-10 22:06:38,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-10 23:07:44] 2026-01-10 22:06:38,913 | INFO     | time since job start (21701s) is within the limit (349056.0s)
[2026-01-10 23:07:44] 2026-01-10 22:06:39,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,429 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:07:44] 2026-01-10 22:06:39,430 | INFO     | job 6963187011 has completed (purged errors)
[2026-01-10 23:07:44] 2026-01-10 22:06:39,430 | INFO     | overall cleanup function is called
[2026-01-10 23:07:44] 2026-01-10 22:06:40,028 | INFO     | PID=28518 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 23:07:44] 2026-01-10 22:06:40,028 | INFO     | .. there are 2 such processes running
[2026-01-10 23:07:44] 2026-01-10 22:06:40,439 | INFO     | --- collectZombieJob: --- 10, [2614]
[2026-01-10 23:07:44] 2026-01-10 22:06:40,439 | INFO     | zombie collector waiting for pid 2614
[2026-01-10 23:07:44] 2026-01-10 22:06:40,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:07:44] 2026-01-10 22:06:40,439 | INFO     | collected zombie processes
[2026-01-10 23:07:44] 2026-01-10 22:06:40,439 | INFO     | will attempt to kill all subprocesses of pid=2614
[2026-01-10 23:07:44] 2026-01-10 22:06:40,524 | INFO     | process IDs to be killed: [2614] (in reverse order)
[2026-01-10 23:07:44] 2026-01-10 22:06:41,254 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:07:44] 2026-01-10 22:06:41,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:07:44] 2026-01-10 22:06:41,257 | INFO     | did not find any defunct processes belonging to 2614
[2026-01-10 23:07:44] 2026-01-10 22:06:41,259 | INFO     | did not find any defunct processes belonging to 2614
[2026-01-10 23:07:44] 2026-01-10 22:06:41,259 | INFO     | ready for new job
[2026-01-10 23:07:44] 2026-01-10 22:06:41,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:07:44] 2026-01-10 22:06:41,262 | INFO     | ***************************************
[2026-01-10 23:07:44] 2026-01-10 22:06:41,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:07:44] 2026-01-10 22:06:41,262 | INFO     | ***************************************
[2026-01-10 23:07:44] 2026-01-10 22:06:41,266 | INFO     | 
[2026-01-10 23:07:44] 2026-01-10 22:06:41,266 | INFO     | pilot is running in a VM
[2026-01-10 23:07:44] 2026-01-10 22:06:41,266 | INFO     | architecture information:
[2026-01-10 23:07:44] 2026-01-10 22:06:41,280 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:07:44] 2026-01-10 22:06:41,550 | INFO     | cat /etc/os-release:
[2026-01-10 23:07:44] NAME="CentOS Linux"
[2026-01-10 23:07:44] VERSION="7 (Core)"
[2026-01-10 23:07:44] ID="centos"
[2026-01-10 23:07:44] ID_LIKE="rhel fedora"
[2026-01-10 23:07:44] VERSION_ID="7"
[2026-01-10 23:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:07:44] ANSI_COLOR="0;31"
[2026-01-10 23:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:07:44] HOME_URL="https://www.centos.org/"
[2026-01-10 23:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:07:44] 
[2026-01-10 23:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:07:44] 
[2026-01-10 23:07:44] 2026-01-10 22:06:41,551 | INFO     | ***************************************
[2026-01-10 23:07:44] 2026-01-10 22:06:42,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-10 23:07:44] 2026-01-10 22:06:42,280 | INFO     | sufficient remaining disk space (496423141376 B)
[2026-01-10 23:07:44] 2026-01-10 22:06:42,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:07:44] 2026-01-10 22:06:42,281 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:07:44] 2026-01-10 22:06:42,281 | INFO     | update_server=False
[2026-01-10 23:07:44] 2026-01-10 22:06:42,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:07:44] 2026-01-10 22:06:42,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:07:44] 2026-01-10 22:06:42,289 | INFO     | aborting loop
[2026-01-10 23:07:44] 2026-01-10 22:06:42,719 | INFO     | all job control threads have been joined
[2026-01-10 23:07:44] 2026-01-10 22:06:42,873 | INFO     | all data control threads have been joined
[2026-01-10 23:07:44] 2026-01-10 22:06:42,958 | INFO     | all payload control threads have been joined
[2026-01-10 23:07:44] 2026-01-10 22:06:43,287 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,295 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,564 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,725 | INFO     | [job] control thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:07:44] 2026-01-10 22:06:43,770 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:07:44] 2026-01-10 22:06:43,879 | INFO     | [data] control thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,964 | INFO     | [payload] control thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:43,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,096 | INFO     | [job] validate thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,124 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,515 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,531 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:44,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:07:44] 2026-01-10 22:06:44,820 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:45,768 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:06:48,544 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:07:44] 2026-01-10 22:07:12,142 | INFO     | PID=28518 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 23:07:44] 2026-01-10 22:07:12,143 | INFO     | .. there are 2 such processes running
[2026-01-10 23:07:44] 2026-01-10 22:07:12,143 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:07:44] 2026-01-10 22:07:12,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:07:44] 2026-01-10 22:07:12,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:07:44] 2026-01-10 22:07:33,907 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:07:44] 2026-01-10 22:07:34,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743354599232)>', '<ExcThread(monitor, started 139742893025024)>']
[2026-01-10 23:07:44] 2026-01-10 22:07:35,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:07:44] 2026-01-10 22:07:35,281 | INFO     | [monitor] control thread has ended
[2026-01-10 23:07:44] 2026-01-10 22:07:39,481 | INFO     | all workflow threads have been joined
[2026-01-10 23:07:44] 2026-01-10 22:07:39,481 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:07:44] 2026-01-10 22:07:39,481 | INFO     | traces error code: 0
[2026-01-10 23:07:44] 2026-01-10 22:07:39,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:07:44] 2026-01-10 22:07:39,923 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:07:44] 2026-01-10 22:07:39,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:07:44] 2026-01-10 22:07:40,079 [wrapper] pilotpid: 28518
[2026-01-10 23:07:44] 2026-01-10 22:07:40,186 [wrapper] Pilot exit status: 0
[2026-01-10 23:07:44] 2026-01-10 22:07:40,655 [wrapper] pandaids: 6963187011
[2026-01-10 23:07:44] 2026-01-10 22:07:41,755 [wrapper] cleanup supervisor_pilot  2164 28519
[2026-01-10 23:07:44] 2026-01-10 22:07:41,884 [wrapper] Test setup, not cleaning
[2026-01-10 23:07:44] 2026-01-10 22:07:41,972 [wrapper] apfmon messages muted
[2026-01-10 23:07:44] 2026-01-10 22:07:42,081 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:07:44] 2026-01-10 22:07:42,177 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:07:44]  *** Error codes and diagnostics ***
[2026-01-10 23:07:44]     "exeErrorCode": 0,
[2026-01-10 23:07:44]     "exeErrorDiag": "",
[2026-01-10 23:07:44]     "pilotErrorCode": 0,
[2026-01-10 23:07:44]     "pilotErrorDiag": "",
[2026-01-10 23:07:44]  *** Listing of results directory ***
[2026-01-10 23:07:44] total 447520
[2026-01-10 23:07:44] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc       100 Jan 10 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:07:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 16:59 run_atlas
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc       105 Jan 10 16:59 job.xml
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc      6390 Jan 10 16:59 init_data.xml
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc 227457343 Jan 10 16:59 EVNT.47898824._001415.pool.root.1
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 16:59 start_atlas.sh
[2026-01-10 23:07:44] drwxrwx--x. 2 boinc boinc        68 Jan 10 16:59 shared
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc    592399 Jan 10 16:59 input.tar.gz
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc         0 Jan 10 16:59 boinc_lockfile
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc      2519 Jan 10 17:00 pandaJob.out
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc    989556 Jan 10 17:04 agis_schedconf.cvmfs.json
[2026-01-10 23:07:44] drwx------. 5 boinc boinc      4096 Jan 10 17:04 pilot3
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc 220024387 Jan 10 23:03 HITS.47898826._036919.pool.root.1
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc       530 Jan 10 23:03 boinc_task_state.xml
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc      1012 Jan 10 23:04 memory_monitor_summary.json
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc   1516240 Jan 10 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc    560373 Jan 10 23:04 log.47898826._036919.job.log.tgz.1
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc        95 Jan 10 23:06 pilot_heartbeat.json
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc      7777 Jan 10 23:06 heartbeat.json
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc      4885 Jan 10 23:07 pilotlog.txt
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc   2881435 Jan 10 23:07 log.47898826._036919.job.log.1
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc      8192 Jan 10 23:07 boinc_mmap_file
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc        28 Jan 10 23:07 wrapper_checkpoint.txt
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc       357 Jan 10 23:07 output.list
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc       620 Jan 10 23:07 runtime_log
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc   3461120 Jan 10 23:07 result.tar.gz
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc       657 Jan 10 23:07 tf0KDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi3lKDmlnvLam.diag
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc      8833 Jan 10 23:07 runtime_log.err
[2026-01-10 23:07:44] -rw-r--r--. 1 boinc boinc     20866 Jan 10 23:07 stderr.txt
[2026-01-10 23:07:44] HITS file was successfully produced:
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc 220024387 Jan 10 23:03 shared/HITS.pool.root.1
[2026-01-10 23:07:44]  *** Contents of shared directory: ***
[2026-01-10 23:07:44] total 440972
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc 227457343 Jan 10 16:59 ATLAS.root_0
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 16:59 start_atlas.sh
[2026-01-10 23:07:44] -rw-r--r--. 2 boinc boinc    592399 Jan 10 16:59 input.tar.gz
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc 220024387 Jan 10 23:03 HITS.pool.root.1
[2026-01-10 23:07:44] -rw-------. 1 boinc boinc   3461120 Jan 10 23:07 result.tar.gz
23:07:46 (24779): run_atlas exited; CPU time 79595.517964
23:07:46 (24779): called boinc_finish(0)

</stderr_txt>
]]>

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