Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:57:18 (2656): wrapper (7.7.26015): starting
20:57:18 (2656): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:57:18] Arguments: --nthreads 8
[2026-01-09 20:57:18] Threads: 8
[2026-01-09 20:57:18] Checking for CVMFS
[2026-01-09 20:57:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:57:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:57:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:57:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:57:19] 2.11.2.0 25933 35847 122712 154955 3 57 13846422 25165825 0 130560 0 15318892 99.827 10076014 3616 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:57:19] CVMFS is ok
[2026-01-09 20:57:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:57:19] Checking for apptainer binary...
[2026-01-09 20:57:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:57:19] Running /usr/bin/apptainer --version
[2026-01-09 20:57:19] apptainer version 1.3.2-1.el7
[2026-01-09 20:57:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:57:20] cg-vwn397.simple-grid.lan
[2026-01-09 20:57:20] apptainer works
[2026-01-09 20:57:20] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:57:20] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:57:20] Starting ATLAS job with PandaID=6963186948
[2026-01-09 20:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:47:09]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:47:09] 2026-01-09 23:46:02,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:47:09] 2026-01-09 23:46:02,255 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 00:47:09] 2026-01-09 23:46:02,257 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963186948/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,257 | INFO     | extracted standard info from prmon json
[2026-01-10 00:47:09] 2026-01-09 23:46:02,258 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:47:09] 2026-01-09 23:46:02,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:47:09] 2026-01-09 23:46:02,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:47:09] 2026-01-09 23:46:02,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:47:09] 2026-01-09 23:46:02,263 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:47:09] 2026-01-09 23:46:02,264 | INFO     | sum of square deviations: 3438620752.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,266 | INFO     | sum of deviations: 12723070790.999998
[2026-01-10 00:47:09] 2026-01-09 23:46:02,266 | INFO     | mean x: 1767995454.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,266 | INFO     | mean y: 2488914.9596412554
[2026-01-10 00:47:09] 2026-01-09 23:46:02,266 | INFO     | intersect: -6539183732.809042
[2026-01-10 00:47:09] 2026-01-09 23:46:02,267 | INFO     | chi2: 2.2418311216142413
[2026-01-10 00:47:09] 2026-01-09 23:46:02,267 | INFO     | sum of square deviations: 3212467674.5
[2026-01-10 00:47:09] 2026-01-09 23:46:02,269 | INFO     | sum of deviations: 26963846439.500004
[2026-01-10 00:47:09] 2026-01-09 23:46:02,269 | INFO     | mean x: 1767995301.5
[2026-01-10 00:47:09] 2026-01-09 23:46:02,269 | INFO     | mean y: 2498336.9128440367
[2026-01-10 00:47:09] 2026-01-09 23:46:02,269 | INFO     | intersect: -14837169683.349289
[2026-01-10 00:47:09] 2026-01-09 23:46:02,270 | INFO     | chi2: 1.4743754511359757
[2026-01-10 00:47:09] 2026-01-09 23:46:02,270 | INFO     | current chi2=1.4743754511359757 (change=34.23342923019355 %)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,270 | INFO     | sum of square deviations: 2996454322.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,272 | INFO     | sum of deviations: 26216027645.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,272 | INFO     | mean x: 1767995149.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,272 | INFO     | mean y: 2497808.8873239434
[2026-01-10 00:47:09] 2026-01-09 23:46:02,273 | INFO     | intersect: -15465720532.406614
[2026-01-10 00:47:09] 2026-01-09 23:46:02,273 | INFO     | chi2: 1.4752332797918153
[2026-01-10 00:47:09] 2026-01-09 23:46:02,273 | INFO     | current chi2=1.4752332797918153 (change=-0.05818251078303499 %)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,273 | INFO     | right removable region: 212
[2026-01-10 00:47:09] 2026-01-09 23:46:02,274 | INFO     | sum of square deviations: 3212467674.5
[2026-01-10 00:47:09] 2026-01-09 23:46:02,275 | INFO     | sum of deviations: -19932289362.000004
[2026-01-10 00:47:09] 2026-01-09 23:46:02,276 | INFO     | mean x: 1767995606.5
[2026-01-10 00:47:09] 2026-01-09 23:46:02,276 | INFO     | mean y: 2510697.660550459
[2026-01-10 00:47:09] 2026-01-09 23:46:02,276 | INFO     | intersect: 10972333148.86626
[2026-01-10 00:47:09] 2026-01-09 23:46:02,276 | INFO     | chi2: 0.8571551118880938
[2026-01-10 00:47:09] 2026-01-09 23:46:02,276 | INFO     | current chi2=0.8571551118880938 (change=61.76540223641399 %)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,277 | INFO     | sum of square deviations: 2996454322.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,279 | INFO     | sum of deviations: -15788467922.999998
[2026-01-10 00:47:09] 2026-01-09 23:46:02,279 | INFO     | mean x: 1767995759.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,279 | INFO     | mean y: 2507739.9906103285
[2026-01-10 00:47:09] 2026-01-09 23:46:02,279 | INFO     | intersect: 9318165957.780567
[2026-01-10 00:47:09] 2026-01-09 23:46:02,280 | INFO     | chi2: 0.8380327364457588
[2026-01-10 00:47:09] 2026-01-09 23:46:02,286 | INFO     | current chi2=0.8380327364457588 (change=2.2309119058058537 %)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,286 | INFO     | left removable region: 20
[2026-01-10 00:47:09] 2026-01-09 23:46:02,287 | INFO     | sum of square deviations: 2194675568.0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,288 | INFO     | sum of deviations: 4680446643.500001
[2026-01-10 00:47:09] 2026-01-09 23:46:02,288 | INFO     | mean x: 1767995728.5
[2026-01-10 00:47:09] 2026-01-09 23:46:02,289 | INFO     | mean y: 2512800.2135416665
[2026-01-10 00:47:09] 2026-01-09 23:46:02,289 | INFO     | intersect: -3767980567.3875527
[2026-01-10 00:47:09] 2026-01-09 23:46:02,289 | INFO     | chi2: 0.001450618862389052
[2026-01-10 00:47:09] 2026-01-09 23:46:02,289 | INFO     | current memory leak: 2.13 B/s (using 192 data points, chi2=0.00)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,290 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,290 | INFO     | ..............................
[2026-01-10 00:47:09] 2026-01-09 23:46:02,290 | INFO     | . Timing measurements:
[2026-01-10 00:47:09] 2026-01-09 23:46:02,290 | INFO     | . get job = 0 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . initial setup = 1 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . payload setup = 6 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . stage-in = 0 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . payload execution = 13570 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . stage-out = 3 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | . log creation = 1 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,291 | INFO     | ..............................
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | 
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | job summary report
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | --------------------------------------------------
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | PanDA job id: 6963186948
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | task id: 47898826
[2026-01-10 00:47:09] 2026-01-09 23:46:02,443 | INFO     | errors: (none)
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | pilot state: finished 
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | transexitcode: 0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | exeerrorcode: 0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | exeerrordiag: 
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | exitcode: 0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | exitmsg: OK
[2026-01-10 00:47:09] 2026-01-09 23:46:02,444 | INFO     | cpuconsumptiontime: 77039 s
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | nevents: 400
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | neventsw: 0
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | pid: 12828
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | pgrp: 12828
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | corecount: 8
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | event service: False
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 13581: 2314223, 13585: 2323277, 13692: 2323415}
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | --------------------------------------------------
[2026-01-10 00:47:09] 2026-01-09 23:46:02,445 | INFO     | 
[2026-01-10 00:47:09] 2026-01-09 23:46:02,446 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-10 00:47:09] 2026-01-09 23:46:02,483 | INFO     | time since job start (13708s) is within the limit (349056.0s)
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | job 6963186948 has completed (purged errors)
[2026-01-10 00:47:09] 2026-01-09 23:46:03,051 | INFO     | overall cleanup function is called
[2026-01-10 00:47:09] 2026-01-09 23:46:04,060 | INFO     | --- collectZombieJob: --- 10, [12828]
[2026-01-10 00:47:09] 2026-01-09 23:46:04,060 | INFO     | zombie collector waiting for pid 12828
[2026-01-10 00:47:09] 2026-01-09 23:46:04,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:47:09] 2026-01-09 23:46:04,060 | INFO     | collected zombie processes
[2026-01-10 00:47:09] 2026-01-09 23:46:04,060 | INFO     | will attempt to kill all subprocesses of pid=12828
[2026-01-10 00:47:09] 2026-01-09 23:46:04,163 | INFO     | process IDs to be killed: [12828] (in reverse order)
[2026-01-10 00:47:09] 2026-01-09 23:46:05,223 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:47:09] 2026-01-09 23:46:05,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:47:09] 2026-01-09 23:46:05,231 | INFO     | did not find any defunct processes belonging to 12828
[2026-01-10 00:47:09] 2026-01-09 23:46:05,235 | INFO     | did not find any defunct processes belonging to 12828
[2026-01-10 00:47:09] 2026-01-09 23:46:05,235 | INFO     | ready for new job
[2026-01-10 00:47:09] 2026-01-09 23:46:05,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:47:09] 2026-01-09 23:46:05,237 | INFO     | ***************************************
[2026-01-10 00:47:09] 2026-01-09 23:46:05,238 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:47:09] 2026-01-09 23:46:05,238 | INFO     | ***************************************
[2026-01-10 00:47:09] 2026-01-09 23:46:05,238 | INFO     | 
[2026-01-10 00:47:09] 2026-01-09 23:46:05,239 | INFO     | pilot is running in a VM
[2026-01-10 00:47:09] 2026-01-09 23:46:05,239 | INFO     | architecture information:
[2026-01-10 00:47:09] 2026-01-09 23:46:05,250 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:47:09] 2026-01-09 23:46:05,477 | INFO     | cat /etc/os-release:
[2026-01-10 00:47:09] NAME="CentOS Linux"
[2026-01-10 00:47:09] VERSION="7 (Core)"
[2026-01-10 00:47:09] ID="centos"
[2026-01-10 00:47:09] ID_LIKE="rhel fedora"
[2026-01-10 00:47:09] VERSION_ID="7"
[2026-01-10 00:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:47:09] ANSI_COLOR="0;31"
[2026-01-10 00:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:47:09] HOME_URL="https://www.centos.org/"
[2026-01-10 00:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:47:09] 
[2026-01-10 00:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:47:09] 
[2026-01-10 00:47:09] 2026-01-09 23:46:05,478 | INFO     | ***************************************
[2026-01-10 00:47:09] 2026-01-09 23:46:05,981 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-10 00:47:09] 2026-01-09 23:46:06,048 | INFO     | sufficient remaining disk space (496608739328 B)
[2026-01-10 00:47:09] 2026-01-09 23:46:06,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:47:09] 2026-01-09 23:46:06,049 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:47:09] 2026-01-09 23:46:06,049 | INFO     | update_server=False
[2026-01-10 00:47:09] 2026-01-09 23:46:06,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:47:09] 2026-01-09 23:46:06,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:47:09] 2026-01-09 23:46:06,050 | INFO     | aborting loop
[2026-01-10 00:47:09] 2026-01-09 23:46:06,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:47:09] 2026-01-09 23:46:06,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:47:09] 2026-01-09 23:46:06,153 | INFO     | all data control threads have been joined
[2026-01-10 00:47:09] 2026-01-09 23:46:07,055 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,056 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,097 | INFO     | all job control threads have been joined
[2026-01-10 00:47:09] 2026-01-09 23:46:07,142 | INFO     | all payload control threads have been joined
[2026-01-10 00:47:09] 2026-01-09 23:46:07,159 | INFO     | [data] control thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:47:09] 2026-01-09 23:46:07,490 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,643 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,679 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:07,979 | INFO     | [job] validate thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,103 | INFO     | [job] control thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,148 | INFO     | [payload] control thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,150 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,164 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,412 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,463 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,469 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:08,561 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:10,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:47:09] 2026-01-09 23:46:35,615 | INFO     | PID=6396 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 00:47:09] 2026-01-09 23:46:35,615 | INFO     | .. there are 2 such processes running
[2026-01-10 00:47:09] 2026-01-09 23:46:35,621 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:47:09] 2026-01-09 23:46:35,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:47:09] 2026-01-09 23:46:35,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:47:09] 2026-01-09 23:46:57,114 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:47:09] 2026-01-09 23:46:59,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849328473920)>', '<ExcThread(monitor, started 139848740488960)>']
[2026-01-10 00:47:09] 2026-01-09 23:46:59,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:47:09] 2026-01-09 23:46:59,766 | INFO     | [monitor] control thread has ended
[2026-01-10 00:47:09] 2026-01-09 23:47:04,215 | INFO     | all workflow threads have been joined
[2026-01-10 00:47:09] 2026-01-09 23:47:04,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:47:09] 2026-01-09 23:47:04,215 | INFO     | traces error code: 0
[2026-01-10 00:47:09] 2026-01-09 23:47:04,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:47:09] 2026-01-09 23:47:04,766 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:47:09] 2026-01-09 23:47:04,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:47:09] 2026-01-09 23:47:04,927 [wrapper] pilotpid: 6396
[2026-01-10 00:47:09] 2026-01-09 23:47:05,065 [wrapper] Pilot exit status: 0
[2026-01-10 00:47:09] 2026-01-09 23:47:05,601 [wrapper] pandaids: 6963186948
[2026-01-10 00:47:09] 2026-01-09 23:47:06,854 [wrapper] cleanup supervisor_pilot 17886 6397
[2026-01-10 00:47:09] 2026-01-09 23:47:06,916 [wrapper] Test setup, not cleaning
[2026-01-10 00:47:09] 2026-01-09 23:47:07,040 [wrapper] apfmon messages muted
[2026-01-10 00:47:09] 2026-01-09 23:47:07,122 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:47:09] 2026-01-09 23:47:07,204 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:47:09]  *** Error codes and diagnostics ***
[2026-01-10 00:47:09]     "exeErrorCode": 0,
[2026-01-10 00:47:09]     "exeErrorDiag": "",
[2026-01-10 00:47:09]     "pilotErrorCode": 0,
[2026-01-10 00:47:09]     "pilotErrorDiag": "",
[2026-01-10 00:47:09]  *** Listing of results directory ***
[2026-01-10 00:47:09] total 443384
[2026-01-10 00:47:09] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:47:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:57 run_atlas
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:57 job.xml
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc      6390 Jan  9 20:57 init_data.xml
[2026-01-10 00:47:09] -rw-r--r--. 2 boinc boinc 223351370 Jan  9 20:57 EVNT.47898824._001413.pool.root.1
[2026-01-10 00:47:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:57 start_atlas.sh
[2026-01-10 00:47:09] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:57 shared
[2026-01-10 00:47:09] -rw-r--r--. 2 boinc boinc    592399 Jan  9 20:57 input.tar.gz
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:57 boinc_lockfile
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc      2519 Jan  9 20:57 pandaJob.out
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc    989364 Jan  9 20:57 agis_schedconf.cvmfs.json
[2026-01-10 00:47:09] drwx------. 5 boinc boinc      4096 Jan  9 20:57 pilot3
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc 222187588 Jan 10 00:42 HITS.47898826._036856.pool.root.1
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc       531 Jan 10 00:43 boinc_task_state.xml
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc      1018 Jan 10 00:44 memory_monitor_summary.json
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc   1516240 Jan 10 00:44 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc    441363 Jan 10 00:44 log.47898826._036856.job.log.tgz.1
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc      7775 Jan 10 00:46 heartbeat.json
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc        95 Jan 10 00:46 pilot_heartbeat.json
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc        28 Jan 10 00:46 wrapper_checkpoint.txt
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc      8192 Jan 10 00:46 boinc_mmap_file
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc      4883 Jan 10 00:47 pilotlog.txt
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc   1850228 Jan 10 00:47 log.47898826._036856.job.log.1
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc       357 Jan 10 00:47 output.list
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc       620 Jan 10 00:47 runtime_log
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc   2314240 Jan 10 00:47 result.tar.gz
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc      8817 Jan 10 00:47 runtime_log.err
[2026-01-10 00:47:09] -rw-------. 1 boinc boinc       656 Jan 10 00:47 n0XLDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHqgKDm18NHyn.diag
[2026-01-10 00:47:09] -rw-r--r--. 1 boinc boinc     20650 Jan 10 00:47 stderr.txt
[2026-01-10 00:47:10] HITS file was successfully produced:
[2026-01-10 00:47:10] -rw-------. 1 boinc boinc 222187588 Jan 10 00:42 shared/HITS.pool.root.1
[2026-01-10 00:47:10]  *** Contents of shared directory: ***
[2026-01-10 00:47:10] total 437960
[2026-01-10 00:47:10] -rw-r--r--. 2 boinc boinc 223351370 Jan  9 20:57 ATLAS.root_0
[2026-01-10 00:47:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:57 start_atlas.sh
[2026-01-10 00:47:10] -rw-r--r--. 2 boinc boinc    592399 Jan  9 20:57 input.tar.gz
[2026-01-10 00:47:10] -rw-------. 1 boinc boinc 222187588 Jan 10 00:42 HITS.pool.root.1
[2026-01-10 00:47:10] -rw-------. 1 boinc boinc   2314240 Jan 10 00:47 result.tar.gz
00:47:11 (2656): run_atlas exited; CPU time 77146.859010
00:47:11 (2656): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN