Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
02:32:40 (2447599): wrapper (7.7.26015): starting
02:32:40 (2447599): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 02:32:40] Arguments: --nthreads 4
[2026-01-11 02:32:40] Threads: 4
[2026-01-11 02:32:40] Checking for CVMFS
[2026-01-11 02:32:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:32:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:32:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:32:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:32:41] 2.13.3.0 3346151 2845 45944 154998 0 56 32576769 33554432 0 130560 0 2243127 99.990 106937 238 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-11 02:32:41] CVMFS is ok
[2026-01-11 02:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:32:41] Checking for apptainer binary...
[2026-01-11 02:32:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 02:32:41] Running /usr/bin/apptainer --version
[2026-01-11 02:32:41] apptainer version 1.4.4
[2026-01-11 02:32:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:32:41] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-11 02:32:41] apptainer works
[2026-01-11 02:32:41] Set ATHENA_PROC_NUMBER=4
[2026-01-11 02:32:41] Set ATHENA_CORE_NUMBER=4
[2026-01-11 02:32:41] Starting ATLAS job with PandaID=6963186853
[2026-01-11 02:32:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:58:00]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:58:00]  mtime=0
[2026-01-11 03:58:00]  protocol_id=None
[2026-01-11 03:58:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 03:58:00]  replicas=None
[2026-01-11 03:58:00]  scope=mc23_13p6TeV
[2026-01-11 03:58:00]  status=None
[2026-01-11 03:58:00]  status_code=0
[2026-01-11 03:58:00]  storage_token=
[2026-01-11 03:58:00]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6963186853/log.47898826._036761.job.log.tgz.1
[2026-01-11 03:58:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/95/log.47898826._036761.job.log.tgz.1
[2026-01-11 03:58:00]  workdir=None
[2026-01-11 03:58:00] ]
[2026-01-11 03:58:00] 2026-01-11 01:57:15,920 | INFO     | transferring file log.47898826._036761.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6963186853/log.47898826._036761.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-11 03:58:00] 2026-01-11 01:57:15,920 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6963186853/log.47898826._036761.job.log.tgz.1 /home/ek/BOINC/slots/1/log.47898826._036761.job
[2026-01-11 03:58:00] 2026-01-11 01:57:15,930 | INFO     | adding to output.list: log.47898826._036761.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/95/log.47898826._036761.job.log.tg
[2026-01-11 03:58:00] 2026-01-11 01:57:15,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 03:58:00] 2026-01-11 01:57:15,930 | INFO     | summary of transferred files:
[2026-01-11 03:58:00] 2026-01-11 01:57:15,930 | INFO     |  -- lfn=log.47898826._036761.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 03:58:00] 2026-01-11 01:57:15,930 | INFO     | stage-out finished correctly
[2026-01-11 03:58:00] 2026-01-11 01:57:17,621 | INFO     | time since job start (5070s) is within the limit (349056.0s)
[2026-01-11 03:58:00] 2026-01-11 01:57:18,382 | WARNING  | process 2474852 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 03:58:00] 2026-01-11 01:57:18,382 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6963186853/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:58:00] 2026-01-11 01:57:18,475 | INFO     | number of running child processes to parent process 2474852: 1
[2026-01-11 03:58:00] 2026-01-11 01:57:18,475 | INFO     | maximum number of monitored processes: 6
[2026-01-11 03:58:00] 2026-01-11 01:57:19,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 03:58:00] 2026-01-11 01:57:19,626 | INFO     | time since job start (5072s) is within the limit (349056.0s)
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | job 6963186853 has state=finished
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | preparing for final server update for job 6963186853 in state='finished'
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | this job has now completed (state=finished)
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | log transfer has been attempted: DONE
[2026-01-11 03:58:00] 2026-01-11 01:57:19,729 | INFO     | job 6963186853 has finished - writing final server update
[2026-01-11 03:58:00] 2026-01-11 01:57:19,730 | INFO     | total number of processed events: 400 (read)
[2026-01-11 03:58:00] 2026-01-11 01:57:19,730 | INFO     | executing command: lscpu
[2026-01-11 03:58:00] 2026-01-11 01:57:19,743 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 03:58:00] 2026-01-11 01:57:20,978 | INFO     | monitor loop #386: job 0:6963186853 is in state 'finished'
[2026-01-11 03:58:00] 2026-01-11 01:57:20,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,631 | INFO     | time since job start (5074s) is within the limit (349056.0s)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,900 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:58:00] 2026-01-11 01:57:21,901 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4181.104
[2026-01-11 03:58:00] 2026-01-11 01:57:21,903 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6963186853/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,903 | INFO     | extracted standard info from prmon json
[2026-01-11 03:58:00] 2026-01-11 01:57:21,903 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:58:00] 2026-01-11 01:57:21,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:58:00] 2026-01-11 01:57:21,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:58:00] 2026-01-11 01:57:21,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:58:00] 2026-01-11 01:57:21,904 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:58:00] 2026-01-11 01:57:21,904 | INFO     | sum of square deviations: 136095575.0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | sum of deviations: -17260353881.0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | mean x: 1768094176.5
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | mean y: 2565553.9736842103
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | intersect: 224241532774.80563
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | chi2: 0.13480252192559994
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | current memory leak: -126.83 B/s (using 76 data points, chi2=0.13)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | could have reported an average CPU frequency of 4182 MHz (6 samples)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | ..............................
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . Timing measurements:
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . get job = 0 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . initial setup = 2 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . payload setup = 2 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . stage-in = 0 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . payload execution = 5048 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . stage-out = 0 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | . log creation = 0 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,905 | INFO     | ..............................
[2026-01-11 03:58:00] 2026-01-11 01:57:21,936 | INFO     | 
[2026-01-11 03:58:00] 2026-01-11 01:57:21,936 | INFO     | job summary report
[2026-01-11 03:58:00] 2026-01-11 01:57:21,936 | INFO     | --------------------------------------------------
[2026-01-11 03:58:00] 2026-01-11 01:57:21,936 | INFO     | PanDA job id: 6963186853
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | task id: 47898826
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | errors: (none)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | pilot state: finished 
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | transexitcode: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | exeerrorcode: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | exeerrordiag: 
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | exitcode: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | exitmsg: OK
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | cpuconsumptiontime: 19469 s
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | nevents: 400
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | neventsw: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | pid: 2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | pgrp: 2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | corecount: 4
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | event service: False
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2284261, 11: 2284289, 5055: 2310750, 5056: 2319748, 5059: 2319932, 5062: 2320126}
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | --------------------------------------------------
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | 
[2026-01-11 03:58:00] 2026-01-11 01:57:21,937 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,947 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:58:00] 2026-01-11 01:57:21,947 | INFO     | job 6963186853 has completed (purged errors)
[2026-01-11 03:58:00] 2026-01-11 01:57:21,947 | INFO     | overall cleanup function is called
[2026-01-11 03:58:00] 2026-01-11 01:57:22,953 | INFO     | --- collectZombieJob: --- 10, [2474852]
[2026-01-11 03:58:00] 2026-01-11 01:57:22,953 | INFO     | zombie collector waiting for pid 2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:22,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:58:00] 2026-01-11 01:57:22,953 | INFO     | collected zombie processes
[2026-01-11 03:58:00] 2026-01-11 01:57:22,953 | INFO     | will attempt to kill all subprocesses of pid=2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:23,045 | INFO     | process IDs to be killed: [2474852] (in reverse order)
[2026-01-11 03:58:00] 2026-01-11 01:57:23,074 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:58:00] 2026-01-11 01:57:23,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:58:00] 2026-01-11 01:57:23,077 | INFO     | did not find any defunct processes belonging to 2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:23,079 | INFO     | did not find any defunct processes belonging to 2474852
[2026-01-11 03:58:00] 2026-01-11 01:57:23,079 | INFO     | ready for new job
[2026-01-11 03:58:00] 2026-01-11 01:57:23,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:58:00] 2026-01-11 01:57:23,080 | INFO     | ***************************************
[2026-01-11 03:58:00] 2026-01-11 01:57:23,080 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:58:00] 2026-01-11 01:57:23,080 | INFO     | ***************************************
[2026-01-11 03:58:00] 2026-01-11 01:57:23,080 | INFO     | 
[2026-01-11 03:58:00] 2026-01-11 01:57:23,081 | INFO     | architecture information:
[2026-01-11 03:58:00] 2026-01-11 01:57:23,081 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:58:00] 2026-01-11 01:57:23,086 | INFO     | cat /etc/os-release:
[2026-01-11 03:58:00] NAME="CentOS Linux"
[2026-01-11 03:58:00] VERSION="7 (Core)"
[2026-01-11 03:58:00] ID="centos"
[2026-01-11 03:58:00] ID_LIKE="rhel fedora"
[2026-01-11 03:58:00] VERSION_ID="7"
[2026-01-11 03:58:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:58:00] ANSI_COLOR="0;31"
[2026-01-11 03:58:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:58:00] HOME_URL="https://www.centos.org/"
[2026-01-11 03:58:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:58:00] 
[2026-01-11 03:58:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:58:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:58:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:58:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:58:00] 
[2026-01-11 03:58:00] 2026-01-11 01:57:23,086 | INFO     | ***************************************
[2026-01-11 03:58:00] 2026-01-11 01:57:23,588 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | INFO     | sufficient remaining disk space (63651708928 B)
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | INFO     | update_server=False
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:58:00] 2026-01-11 01:57:23,594 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:58:00] 2026-01-11 01:57:23,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:58:00] 2026-01-11 01:57:23,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:58:00] 2026-01-11 01:57:23,800 | INFO     | all payload control threads have been joined
[2026-01-11 03:58:00] 2026-01-11 01:57:23,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:58:00] 2026-01-11 01:57:24,323 | INFO     | all data control threads have been joined
[2026-01-11 03:58:00] 2026-01-11 01:57:24,429 | INFO     | all job control threads have been joined
[2026-01-11 03:58:00] 2026-01-11 01:57:24,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:58:00] 2026-01-11 01:57:24,486 | INFO     | aborting loop
[2026-01-11 03:58:00] 2026-01-11 01:57:24,599 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:24,600 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:24,805 | INFO     | [payload] control thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:24,979 | INFO     | [job] validate thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,016 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:58:00] 2026-01-11 01:57:25,096 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,173 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,328 | INFO     | [data] control thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,434 | INFO     | [job] control thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,491 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,612 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,802 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,868 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:25,974 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:29,077 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:33,958 | INFO     | job.realtimelogging is not enabled
[2026-01-11 03:58:00] 2026-01-11 01:57:34,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:58:00] 2026-01-11 01:57:54,647 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:58:00] 2026-01-11 01:57:54,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669501286208)>', '<ExcThread(monitor, started 140668399761152)>']
[2026-01-11 03:58:00] 2026-01-11 01:57:55,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:58:00] 2026-01-11 01:57:55,744 | INFO     | [monitor] control thread has ended
[2026-01-11 03:58:00] 2026-01-11 01:57:59,893 | INFO     | all workflow threads have been joined
[2026-01-11 03:58:00] 2026-01-11 01:57:59,893 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:58:00] 2026-01-11 01:57:59,893 | INFO     | traces error code: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:59,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:58:00] 2026-01-11 01:57:59,944 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:58:00] 2026-01-11 01:57:59,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:58:00] 2026-01-11 01:57:59,947 [wrapper] pilotpid: 2455038
[2026-01-11 03:58:00] 2026-01-11 01:57:59,949 [wrapper] Pilot exit status: 0
[2026-01-11 03:58:00] 2026-01-11 01:57:59,955 [wrapper] pandaids: 6963186853
[2026-01-11 03:58:00] 2026-01-11 01:57:59,980 [wrapper] cleanup supervisor_pilot 2677106 2455039
[2026-01-11 03:58:00] 2026-01-11 01:57:59,982 [wrapper] Test setup, not cleaning
[2026-01-11 03:58:00] 2026-01-11 01:57:59,984 [wrapper] apfmon messages muted
[2026-01-11 03:58:00] 2026-01-11 01:57:59,985 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:58:00] 2026-01-11 01:57:59,987 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:58:00]  *** Error codes and diagnostics ***
[2026-01-11 03:58:00]     "exeErrorCode": 0,
[2026-01-11 03:58:00]     "exeErrorDiag": "",
[2026-01-11 03:58:00]     "pilotErrorCode": 0,
[2026-01-11 03:58:00]     "pilotErrorDiag": "",
[2026-01-11 03:58:00]  *** Listing of results directory ***
[2026-01-11 03:58:00] total 443216
[2026-01-11 03:58:00] -rwx------ 1 ek ek     36322 Jan  9 03:01 runpilot2-wrapper.sh
[2026-01-11 03:58:00] -rw-r--r-- 1 ek ek    579449 Jan  9 03:06 pilot3.tar.gz
[2026-01-11 03:58:00] -rw-r--r-- 1 ek ek      5112 Jan  9 03:06 queuedata.json
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek       100 Jan 11 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:58:00] -rwxr-xr-x 1 ek ek      7986 Jan 11 02:32 run_atlas
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek       105 Jan 11 02:32 job.xml
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek 224580788 Jan 11 02:32 EVNT.47898824._001409.pool.root.1
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek    592402 Jan 11 02:32 input.tar.gz
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek     15847 Jan 11 02:32 start_atlas.sh
[2026-01-11 03:58:00] drwxrwx--x 2 ek ek      4096 Jan 11 02:32 shared
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek         0 Jan 11 02:32 boinc_setup_complete
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek      9841 Jan 11 02:32 init_data.xml
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek         0 Jan 11 02:32 boinc_lockfile
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek      2520 Jan 11 02:32 pandaJob.out
[2026-01-11 03:58:00] -rw------- 1 ek ek        50 Jan 11 02:32 setup.sh.local
[2026-01-11 03:58:00] -rw------- 1 ek ek    989540 Jan 11 02:32 agis_schedconf.cvmfs.json
[2026-01-11 03:58:00] -rw------- 1 ek ek   1516240 Jan 11 02:32 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:58:00] drwx------ 5 ek ek      4096 Jan 11 02:32 pilot3
[2026-01-11 03:58:00] -rw------- 1 ek ek        95 Jan 11 03:56 pilot_heartbeat.json
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek       529 Jan 11 03:56 boinc_task_state.xml
[2026-01-11 03:58:00] -rw------- 1 ek ek 223320074 Jan 11 03:56 HITS.47898826._036761.pool.root.1
[2026-01-11 03:58:00] -rw------- 1 ek ek      1031 Jan 11 03:57 memory_monitor_summary.json
[2026-01-11 03:58:00] -rw------- 1 ek ek    274106 Jan 11 03:57 log.47898826._036761.job.log.tgz.1
[2026-01-11 03:58:00] -rw------- 1 ek ek      7787 Jan 11 03:57 heartbeat.json
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek      8192 Jan 11 03:57 boinc_mmap_file
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek        27 Jan 11 03:57 wrapper_checkpoint.txt
[2026-01-11 03:58:00] -rw------- 1 ek ek      4624 Jan 11 03:57 pilotlog.txt
[2026-01-11 03:58:00] -rw------- 1 ek ek    739568 Jan 11 03:57 log.47898826._036761.job.log.1
[2026-01-11 03:58:00] -rw------- 1 ek ek       357 Jan 11 03:58 output.list
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek       620 Jan 11 03:58 runtime_log
[2026-01-11 03:58:00] -rw------- 1 ek ek   1034240 Jan 11 03:58 result.tar.gz
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek      9502 Jan 11 03:58 runtime_log.err
[2026-01-11 03:58:00] -rw------- 1 ek ek       666 Jan 11 03:58 ni6NDml3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8ogKDm9SRgNn.diag
[2026-01-11 03:58:00] -rw-rw-r-- 1 ek ek     21525 Jan 11 03:58 stderr.txt
[2026-01-11 03:58:00] HITS file was successfully produced:
[2026-01-11 03:58:00] -rw------- 1 ek ek 223320074 Jan 11 03:56 shared/HITS.pool.root.1
[2026-01-11 03:58:00]  *** Contents of shared directory: ***
[2026-01-11 03:58:00] total 439024
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek 224580788 Jan 11 02:32 ATLAS.root_0
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek    592402 Jan 11 02:32 input.tar.gz
[2026-01-11 03:58:00] -rw-r--r-- 2 ek ek     15847 Jan 11 02:32 start_atlas.sh
[2026-01-11 03:58:00] -rw------- 1 ek ek 223320074 Jan 11 03:56 HITS.pool.root.1
[2026-01-11 03:58:00] -rw------- 1 ek ek   1034240 Jan 11 03:58 result.tar.gz
03:58:01 (2447599): run_atlas exited; CPU time 19519.329939
03:58:01 (2447599): called boinc_finish(0)

</stderr_txt>
]]>

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