Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:29:07 (5720): wrapper (7.7.26015): starting
21:29:07 (5720): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:29:07] Arguments: --nthreads 8
[2026-01-09 21:29:07] Threads: 8
[2026-01-09 21:29:07] Checking for CVMFS
[2026-01-09 21:29:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:29:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:29:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:29:07] 2.11.2.0 11583 35897 96068 154956 1 56 24123313 25165825 0 130560 0 15579235 99.840 9979904 3707 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 21:29:07] CVMFS is ok
[2026-01-09 21:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:29:07] Checking for apptainer binary...
[2026-01-09 21:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:29:07] Running /usr/bin/apptainer --version
[2026-01-09 21:29:08] apptainer version 1.3.2-1.el7
[2026-01-09 21:29:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:29:09] cg-vwn428.simple-grid.lan
[2026-01-09 21:29:09] apptainer works
[2026-01-09 21:29:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:29:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:29:09] Starting ATLAS job with PandaID=6963186906
[2026-01-09 21:29:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:23:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 02:23:07] 2026-01-10 01:22:22,359 | INFO     | time since job start (17576s) is within the limit (349056.0s)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,441 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 02:23:07] 2026-01-10 01:22:22,442 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 02:23:07] 2026-01-10 01:22:22,444 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963186906/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,445 | INFO     | extracted standard info from prmon json
[2026-01-10 02:23:07] 2026-01-10 01:22:22,445 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 02:23:07] 2026-01-10 01:22:22,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 02:23:07] 2026-01-10 01:22:22,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 02:23:07] 2026-01-10 01:22:22,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 02:23:07] 2026-01-10 01:22:22,452 | INFO     | fitting pss+swap vs Time
[2026-01-10 02:23:07] 2026-01-10 01:22:22,453 | INFO     | sum of square deviations: 7253894147.5
[2026-01-10 02:23:07] 2026-01-10 01:22:22,456 | INFO     | sum of deviations: -44131423163.50001
[2026-01-10 02:23:07] 2026-01-10 01:22:22,456 | INFO     | mean x: 1767999295.5
[2026-01-10 02:23:07] 2026-01-10 01:22:22,456 | INFO     | mean y: 2519871.255244755
[2026-01-10 02:23:07] 2026-01-10 01:22:22,457 | INFO     | intersect: 10758718331.825682
[2026-01-10 02:23:07] 2026-01-10 01:22:22,457 | INFO     | chi2: 2.5285296526861534
[2026-01-10 02:23:07] 2026-01-10 01:22:22,458 | INFO     | sum of square deviations: 6880054580.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,461 | INFO     | sum of deviations: -24328154138.999992
[2026-01-10 02:23:07] 2026-01-10 01:22:22,461 | INFO     | mean x: 1767999143.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,461 | INFO     | mean y: 2527839.978647687
[2026-01-10 02:23:07] 2026-01-10 01:22:22,461 | INFO     | intersect: 6254245056.519085
[2026-01-10 02:23:07] 2026-01-10 01:22:22,462 | INFO     | chi2: 1.7622883681007508
[2026-01-10 02:23:07] 2026-01-10 01:22:22,462 | INFO     | current chi2=1.7622883681007508 (change=30.303828304777646 %)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,462 | INFO     | sum of square deviations: 6519285025.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,465 | INFO     | sum of deviations: -23965643949.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,465 | INFO     | mean x: 1767998990.5
[2026-01-10 02:23:07] 2026-01-10 01:22:22,466 | INFO     | mean y: 2527993.231884058
[2026-01-10 02:23:07] 2026-01-10 01:22:22,466 | INFO     | intersect: 6501896274.5741205
[2026-01-10 02:23:07] 2026-01-10 01:22:22,466 | INFO     | chi2: 1.7608921227709133
[2026-01-10 02:23:07] 2026-01-10 01:22:22,466 | INFO     | current chi2=1.7608921227709133 (change=0.07922910660428786 %)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,467 | INFO     | right removable region: 275
[2026-01-10 02:23:07] 2026-01-10 01:22:22,467 | INFO     | sum of square deviations: 6880054580.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,470 | INFO     | sum of deviations: -88291960468.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,470 | INFO     | mean x: 1767999448.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,470 | INFO     | mean y: 2537742.049822064
[2026-01-10 02:23:07] 2026-01-10 01:22:22,471 | INFO     | intersect: 22691331203.66533
[2026-01-10 02:23:07] 2026-01-10 01:22:22,471 | INFO     | chi2: 1.053984905666741
[2026-01-10 02:23:07] 2026-01-10 01:22:22,471 | INFO     | current chi2=1.053984905666741 (change=58.31629245292604 %)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,472 | INFO     | sum of square deviations: 6519285025.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,475 | INFO     | sum of deviations: -84247046442.00003
[2026-01-10 02:23:07] 2026-01-10 01:22:22,475 | INFO     | mean x: 1767999600.5
[2026-01-10 02:23:07] 2026-01-10 01:22:22,475 | INFO     | mean y: 2536011.6666666665
[2026-01-10 02:23:07] 2026-01-10 01:22:22,475 | INFO     | intersect: 22849940885.295586
[2026-01-10 02:23:07] 2026-01-10 01:22:22,476 | INFO     | chi2: 1.0432961327717394
[2026-01-10 02:23:07] 2026-01-10 01:22:22,476 | INFO     | current chi2=1.0432961327717394 (change=1.0141295987763665 %)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,476 | INFO     | left removable region: 20
[2026-01-10 02:23:07] 2026-01-10 01:22:22,476 | INFO     | sum of square deviations: 5141528960.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,479 | INFO     | sum of deviations: -44923129627.99999
[2026-01-10 02:23:07] 2026-01-10 01:22:22,479 | INFO     | mean x: 1767999570.0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,479 | INFO     | mean y: 2536265.094117647
[2026-01-10 02:23:07] 2026-01-10 01:22:22,479 | INFO     | intersect: 15450095635.713367
[2026-01-10 02:23:07] 2026-01-10 01:22:22,480 | INFO     | chi2: 0.2223963141830211
[2026-01-10 02:23:07] 2026-01-10 01:22:22,480 | INFO     | current memory leak: -8.74 B/s (using 255 data points, chi2=0.22)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,481 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,481 | INFO     | ..............................
[2026-01-10 02:23:07] 2026-01-10 01:22:22,481 | INFO     | . Timing measurements:
[2026-01-10 02:23:07] 2026-01-10 01:22:22,481 | INFO     | . get job = 0 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,481 | INFO     | . initial setup = 2 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | . payload setup = 8 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | . stage-in = 0 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | . payload execution = 17428 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | . stage-out = 4 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | . log creation = 1 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,482 | INFO     | ..............................
[2026-01-10 02:23:07] 2026-01-10 01:22:22,634 | INFO     | 
[2026-01-10 02:23:07] 2026-01-10 01:22:22,634 | INFO     | job summary report
[2026-01-10 02:23:07] 2026-01-10 01:22:22,634 | INFO     | --------------------------------------------------
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | PanDA job id: 6963186906
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | task id: 47898826
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | errors: (none)
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | pilot state: finished 
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | transexitcode: 0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | exeerrorcode: 0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | exeerrordiag: 
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | exitcode: 0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | exitmsg: OK
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | cpuconsumptiontime: 81461 s
[2026-01-10 02:23:07] 2026-01-10 01:22:22,635 | INFO     | nevents: 400
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | neventsw: 0
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | pid: 15912
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | pgrp: 15912
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | corecount: 8
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | event service: False
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | sizes: {0: 2283799, 1: 2283998, 7: 2284260, 12: 2284288, 17440: 2315672, 17441: 2315671, 17446: 2324853, 17447: 2324909, 17558: 2325103}
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | --------------------------------------------------
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | 
[2026-01-10 02:23:07] 2026-01-10 01:22:22,636 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 02:23:07] 2026-01-10 01:22:23,207 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,209 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 02:23:07] 2026-01-10 01:22:23,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,210 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 02:23:07] 2026-01-10 01:22:23,210 | INFO     | job 6963186906 has completed (purged errors)
[2026-01-10 02:23:07] 2026-01-10 01:22:23,210 | INFO     | overall cleanup function is called
[2026-01-10 02:23:07] 2026-01-10 01:22:24,219 | INFO     | --- collectZombieJob: --- 10, [15912]
[2026-01-10 02:23:07] 2026-01-10 01:22:24,219 | INFO     | zombie collector waiting for pid 15912
[2026-01-10 02:23:07] 2026-01-10 01:22:24,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 02:23:07] 2026-01-10 01:22:24,219 | INFO     | collected zombie processes
[2026-01-10 02:23:07] 2026-01-10 01:22:24,219 | INFO     | will attempt to kill all subprocesses of pid=15912
[2026-01-10 02:23:07] 2026-01-10 01:22:24,297 | INFO     | process IDs to be killed: [15912] (in reverse order)
[2026-01-10 02:23:07] 2026-01-10 01:22:25,339 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 02:23:07] 2026-01-10 01:22:25,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 02:23:07] 2026-01-10 01:22:25,342 | INFO     | did not find any defunct processes belonging to 15912
[2026-01-10 02:23:07] 2026-01-10 01:22:25,344 | INFO     | did not find any defunct processes belonging to 15912
[2026-01-10 02:23:07] 2026-01-10 01:22:25,344 | INFO     | ready for new job
[2026-01-10 02:23:07] 2026-01-10 01:22:25,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 02:23:07] 2026-01-10 01:22:25,346 | INFO     | ***************************************
[2026-01-10 02:23:07] 2026-01-10 01:22:25,347 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 02:23:07] 2026-01-10 01:22:25,347 | INFO     | ***************************************
[2026-01-10 02:23:07] 2026-01-10 01:22:25,347 | INFO     | 
[2026-01-10 02:23:07] 2026-01-10 01:22:25,348 | INFO     | pilot is running in a VM
[2026-01-10 02:23:07] 2026-01-10 01:22:25,348 | INFO     | architecture information:
[2026-01-10 02:23:07] 2026-01-10 01:22:25,361 | INFO     | executing command: cat /etc/os-release
[2026-01-10 02:23:07] 2026-01-10 01:22:25,593 | INFO     | cat /etc/os-release:
[2026-01-10 02:23:07] NAME="CentOS Linux"
[2026-01-10 02:23:07] VERSION="7 (Core)"
[2026-01-10 02:23:07] ID="centos"
[2026-01-10 02:23:07] ID_LIKE="rhel fedora"
[2026-01-10 02:23:07] VERSION_ID="7"
[2026-01-10 02:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 02:23:07] ANSI_COLOR="0;31"
[2026-01-10 02:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 02:23:07] HOME_URL="https://www.centos.org/"
[2026-01-10 02:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 02:23:07] 
[2026-01-10 02:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 02:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 02:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 02:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 02:23:07] 
[2026-01-10 02:23:07] 2026-01-10 01:22:25,594 | INFO     | ***************************************
[2026-01-10 02:23:07] 2026-01-10 01:22:26,097 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 02:23:07] 2026-01-10 01:22:26,347 | INFO     | sufficient remaining disk space (497383636992 B)
[2026-01-10 02:23:07] 2026-01-10 01:22:26,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 02:23:07] 2026-01-10 01:22:26,347 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 02:23:07] 2026-01-10 01:22:26,347 | INFO     | update_server=False
[2026-01-10 02:23:07] 2026-01-10 01:22:26,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 02:23:07] 2026-01-10 01:22:26,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:23:07] 2026-01-10 01:22:26,349 | INFO     | aborting loop
[2026-01-10 02:23:07] 2026-01-10 01:22:26,359 | INFO     | all payload control threads have been joined
[2026-01-10 02:23:07] 2026-01-10 01:22:26,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 02:23:07] 2026-01-10 01:22:26,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 02:23:07] 2026-01-10 01:22:26,962 | INFO     | all data control threads have been joined
[2026-01-10 02:23:07] 2026-01-10 01:22:27,199 | INFO     | all job control threads have been joined
[2026-01-10 02:23:07] 2026-01-10 01:22:27,354 | INFO     | [job] retrieve thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,355 | INFO     | [job] job monitor thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,365 | INFO     | [payload] control thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,504 | INFO     | [data] copytool_in thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:23:07] 2026-01-10 01:22:27,811 | INFO     | [job] validate thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,812 | INFO     | [payload] failed_post thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,861 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,888 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:27,968 | INFO     | [data] control thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,050 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,205 | INFO     | [job] control thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,529 | INFO     | [data] copytool_out thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,655 | INFO     | [job] queue monitor thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,783 | INFO     | [payload] validate_post thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:28,798 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:30,644 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 02:23:07] 2026-01-10 01:22:55,472 | INFO     | PID=9450 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 02:23:07] 2026-01-10 01:22:55,472 | INFO     | .. there are 2 such processes running
[2026-01-10 02:23:07] 2026-01-10 01:22:55,473 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 02:23:07] 2026-01-10 01:22:55,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 02:23:07] 2026-01-10 01:22:55,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 02:23:07] 2026-01-10 01:22:56,383 | INFO     | [monitor] cgroup control has ended
[2026-01-10 02:23:07] 2026-01-10 01:22:57,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344307410752)>', '<ExcThread(monitor, started 140343869687552)>']
[2026-01-10 02:23:07] 2026-01-10 01:22:58,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 02:23:07] 2026-01-10 01:22:58,491 | INFO     | [monitor] control thread has ended
[2026-01-10 02:23:07] 2026-01-10 01:23:02,916 | INFO     | all workflow threads have been joined
[2026-01-10 02:23:07] 2026-01-10 01:23:02,916 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 02:23:07] 2026-01-10 01:23:02,916 | INFO     | traces error code: 0
[2026-01-10 02:23:07] 2026-01-10 01:23:02,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 02:23:07] 2026-01-10 01:23:03,251 [wrapper] ==== pilot stdout END ====
[2026-01-10 02:23:07] 2026-01-10 01:23:03,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 02:23:07] 2026-01-10 01:23:03,437 [wrapper] pilotpid: 9450
[2026-01-10 02:23:07] 2026-01-10 01:23:03,446 [wrapper] Pilot exit status: 0
[2026-01-10 02:23:07] 2026-01-10 01:23:03,917 [wrapper] pandaids: 6963186906
[2026-01-10 02:23:07] 2026-01-10 01:23:04,610 [wrapper] cleanup supervisor_pilot 21175 9451
[2026-01-10 02:23:07] 2026-01-10 01:23:04,687 [wrapper] Test setup, not cleaning
[2026-01-10 02:23:07] 2026-01-10 01:23:04,781 [wrapper] apfmon messages muted
[2026-01-10 02:23:07] 2026-01-10 01:23:04,852 [wrapper] ==== wrapper stdout END ====
[2026-01-10 02:23:07] 2026-01-10 01:23:04,947 [wrapper] ==== wrapper stderr END ====
[2026-01-10 02:23:07]  *** Error codes and diagnostics ***
[2026-01-10 02:23:07]     "exeErrorCode": 0,
[2026-01-10 02:23:07]     "exeErrorDiag": "",
[2026-01-10 02:23:07]     "pilotErrorCode": 0,
[2026-01-10 02:23:07]     "pilotErrorDiag": "",
[2026-01-10 02:23:07]  *** Listing of results directory ***
[2026-01-10 02:23:07] total 445272
[2026-01-10 02:23:07] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc       100 Jan  9 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 02:23:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 21:29 run_atlas
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc       105 Jan  9 21:29 job.xml
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc 224246184 Jan  9 21:29 EVNT.47898824._001411.pool.root.1
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc    592403 Jan  9 21:29 input.tar.gz
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc      6390 Jan  9 21:29 init_data.xml
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:29 start_atlas.sh
[2026-01-10 02:23:07] drwxrwx--x. 2 boinc boinc        68 Jan  9 21:29 shared
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc         0 Jan  9 21:29 boinc_lockfile
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc      2519 Jan  9 21:29 pandaJob.out
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc    989381 Jan  9 21:29 agis_schedconf.cvmfs.json
[2026-01-10 02:23:07] drwx------. 5 boinc boinc      4096 Jan  9 21:29 pilot3
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc 222121427 Jan 10 02:18 HITS.47898826._036814.pool.root.1
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc       531 Jan 10 02:19 boinc_task_state.xml
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc      1028 Jan 10 02:20 memory_monitor_summary.json
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc   1516240 Jan 10 02:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc    499387 Jan 10 02:20 log.47898826._036814.job.log.tgz.1
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc        95 Jan 10 02:22 pilot_heartbeat.json
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc      7777 Jan 10 02:22 heartbeat.json
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc      8192 Jan 10 02:22 boinc_mmap_file
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc        28 Jan 10 02:22 wrapper_checkpoint.txt
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc      4883 Jan 10 02:23 pilotlog.txt
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc   2347130 Jan 10 02:23 log.47898826._036814.job.log.1
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc       357 Jan 10 02:23 output.list
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc       620 Jan 10 02:23 runtime_log
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc   2867200 Jan 10 02:23 result.tar.gz
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc       656 Jan 10 02:23 xBeKDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdpgKDmco6ibn.diag
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc      8817 Jan 10 02:23 runtime_log.err
[2026-01-10 02:23:07] -rw-r--r--. 1 boinc boinc     20739 Jan 10 02:23 stderr.txt
[2026-01-10 02:23:07] HITS file was successfully produced:
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc 222121427 Jan 10 02:18 shared/HITS.pool.root.1
[2026-01-10 02:23:07]  *** Contents of shared directory: ***
[2026-01-10 02:23:07] total 439304
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc 224246184 Jan  9 21:29 ATLAS.root_0
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc    592403 Jan  9 21:29 input.tar.gz
[2026-01-10 02:23:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:29 start_atlas.sh
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc 222121427 Jan 10 02:18 HITS.pool.root.1
[2026-01-10 02:23:07] -rw-------. 1 boinc boinc   2867200 Jan 10 02:23 result.tar.gz
02:23:08 (5720): run_atlas exited; CPU time 81613.831405
02:23:08 (5720): called boinc_finish(0)

</stderr_txt>
]]>

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