Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:49 (3667551): wrapper (7.7.26015): starting
08:33:49 (3667551): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 08:33:49] Arguments: --nthreads 3
[2026-01-10 08:33:49] Threads: 3
[2026-01-10 08:33:49] Checking for CVMFS
[2026-01-10 08:33:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:33:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:33:50] 2.9.2.0 2973026 2816 87164 154972 1 56 22160696 36864001 0 130560 0 1808848 99.988 105704 6111 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 08:33:50] CVMFS is ok
[2026-01-10 08:33:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:33:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:33:50] Further information can be found at the LHC@home message board.
[2026-01-10 08:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:33:50] Checking for apptainer binary...
[2026-01-10 08:33:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:33:50] Running /usr/bin/apptainer --version
[2026-01-10 08:33:50] apptainer version 1.4.1-1.1
[2026-01-10 08:33:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:33:50] atlasA228b
[2026-01-10 08:33:50] apptainer works
[2026-01-10 08:33:50] Set ATHENA_PROC_NUMBER=3
[2026-01-10 08:33:50] Set ATHENA_CORE_NUMBER=3
[2026-01-10 08:33:50] Starting ATLAS job with PandaID=6963155339
[2026-01-10 08:33:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:24:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:24:12] 2026-01-10 09:23:56,958 | INFO     | all payload control threads have been joined
[2026-01-10 10:24:12] 2026-01-10 09:23:57,178 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,178 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,277 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:24:12] 2026-01-10 09:23:57,726 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,765 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,855 | INFO     | all job control threads have been joined
[2026-01-10 10:24:12] 2026-01-10 09:23:57,949 | INFO     | [data] control thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:57,963 | INFO     | [payload] control thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,161 | INFO     | [job] validate thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,228 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,262 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,273 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,546 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:58,861 | INFO     | [job] control thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:23:59,559 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:24:00,419 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:24:03,131 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:24:12] 2026-01-10 09:24:06,509 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:24:12] 2026-01-10 09:24:07,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:24:12] 2026-01-10 09:24:07,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979405215552)>', '<ExcThread(monitor, started 139979049117440)>']
[2026-01-10 10:24:12] 2026-01-10 09:24:08,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:24:12] 2026-01-10 09:24:08,232 | INFO     | [monitor] control thread has ended
[2026-01-10 10:24:12] 2026-01-10 09:24:12,842 | INFO     | all workflow threads have been joined
[2026-01-10 10:24:12] 2026-01-10 09:24:12,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:24:12] 2026-01-10 09:24:12,842 | INFO     | traces error code: 0
[2026-01-10 10:24:12] 2026-01-10 09:24:12,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:24:12] 2026-01-10 09:24:12,895 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:24:12] 2026-01-10 09:24:12,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:24:12] 2026-01-10 09:24:12,900 [wrapper] pilotpid: 3671285
[2026-01-10 10:24:12] 2026-01-10 09:24:12,903 [wrapper] Pilot exit status: 0
[2026-01-10 10:24:12] 2026-01-10 09:24:12,911 [wrapper] pandaids: 6963155339
[2026-01-10 10:24:12] 2026-01-10 09:24:12,928 [wrapper] cleanup supervisor_pilot 3692213 3671286
[2026-01-10 10:24:12] 2026-01-10 09:24:12,931 [wrapper] Test setup, not cleaning
[2026-01-10 10:24:12] 2026-01-10 09:24:12,934 [wrapper] apfmon messages muted
[2026-01-10 10:24:12] 2026-01-10 09:24:12,936 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:24:12] 2026-01-10 09:24:12,939 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:24:12]  *** Error codes and diagnostics ***
[2026-01-10 10:24:12]     "exeErrorCode": 0,
[2026-01-10 10:24:12]     "exeErrorDiag": "",
[2026-01-10 10:24:12]     "pilotErrorCode": 0,
[2026-01-10 10:24:12]     "pilotErrorDiag": "",
[2026-01-10 10:24:12]  *** Listing of results directory ***
[2026-01-10 10:24:12] total 435552
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 10:24:12] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:24:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:33 run_atlas
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:33 job.xml
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc 222298398 Jan 10 08:33 EVNT.47898824._001184.pool.root.1
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc    592392 Jan 10 08:33 input.tar.gz
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:33 start_atlas.sh
[2026-01-10 10:24:12] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:33 shared
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:33 boinc_setup_complete
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      6449 Jan 10 08:33 init_data.xml
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:33 boinc_lockfile
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      2520 Jan 10 08:33 pandaJob.out
[2026-01-10 10:24:12] -rw------- 1 boinc boinc    989374 Jan 10 08:33 agis_schedconf.cvmfs.json
[2026-01-10 10:24:12] -rw------- 1 boinc boinc   1516240 Jan 10 08:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:24:12] drwx------ 5 boinc boinc      4096 Jan 10 08:33 pilot3
[2026-01-10 10:24:12] -rw------- 1 boinc boinc 217348389 Jan 10 10:23 HITS.47898826._030589.pool.root.1
[2026-01-10 10:24:12] -rw------- 1 boinc boinc        95 Jan 10 10:23 pilot_heartbeat.json
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc       529 Jan 10 10:23 boinc_task_state.xml
[2026-01-10 10:24:12] -rw------- 1 boinc boinc      1027 Jan 10 10:23 memory_monitor_summary.json
[2026-01-10 10:24:12] -rw------- 1 boinc boinc    280783 Jan 10 10:23 log.47898826._030589.job.log.tgz.1
[2026-01-10 10:24:12] -rw------- 1 boinc boinc      7756 Jan 10 10:23 heartbeat.json
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      8192 Jan 10 10:24 boinc_mmap_file
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc        27 Jan 10 10:24 wrapper_checkpoint.txt
[2026-01-10 10:24:12] -rw------- 1 boinc boinc      4814 Jan 10 10:24 pilotlog.txt
[2026-01-10 10:24:12] -rw------- 1 boinc boinc    954038 Jan 10 10:24 log.47898826._030589.job.log.1
[2026-01-10 10:24:12] -rw------- 1 boinc boinc       357 Jan 10 10:24 output.list
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:24 runtime_log
[2026-01-10 10:24:12] -rw------- 1 boinc boinc   1249280 Jan 10 10:24 result.tar.gz
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      8917 Jan 10 10:24 runtime_log.err
[2026-01-10 10:24:12] -rw------- 1 boinc boinc       663 Jan 10 10:24 nlWKDmKWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzBlKDm49Ihln.diag
[2026-01-10 10:24:12] -rw-r--r-- 1 boinc boinc      6175 Jan 10 10:24 stderr.txt
[2026-01-10 10:24:12] HITS file was successfully produced:
[2026-01-10 10:24:12] -rw------- 1 boinc boinc 217348389 Jan 10 10:23 shared/HITS.pool.root.1
[2026-01-10 10:24:12]  *** Contents of shared directory: ***
[2026-01-10 10:24:12] total 431168
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc 222298398 Jan 10 08:33 ATLAS.root_0
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc    592392 Jan 10 08:33 input.tar.gz
[2026-01-10 10:24:12] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:33 start_atlas.sh
[2026-01-10 10:24:12] -rw------- 1 boinc boinc 217348389 Jan 10 10:23 HITS.pool.root.1
[2026-01-10 10:24:12] -rw------- 1 boinc boinc   1249280 Jan 10 10:24 result.tar.gz
10:24:14 (3667551): run_atlas exited; CPU time 19118.870459
10:24:14 (3667551): called boinc_finish(0)

</stderr_txt>
]]>

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