Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:00:50 (431364): wrapper (7.7.26015): starting
10:00:50 (431364): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 10:00:50] Arguments: --nthreads 12
[2026-01-10 10:00:50] Threads: 12
[2026-01-10 10:00:50] Checking for CVMFS
[2026-01-10 10:00:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:00:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:00:51] 2.13.3.0 3084131 3170 88448 154973 1 81 4095411 4097025 1044 130560 0 3714386 99.992 117984 22426 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-10 10:00:51] CVMFS is ok
[2026-01-10 10:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:00:51] Further information can be found at the LHC@home message board.
[2026-01-10 10:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:00:51] Checking for apptainer binary...
[2026-01-10 10:00:51] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-10 10:00:51] apptainer is not installed, using version from CVMFS
[2026-01-10 10:00:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:00:51] pckelar3.cern.ch
[2026-01-10 10:00:51] apptainer works
[2026-01-10 10:00:51] Set ATHENA_PROC_NUMBER=12
[2026-01-10 10:00:51] Set ATHENA_CORE_NUMBER=12
[2026-01-10 10:00:51] Starting ATLAS job with PandaID=6963168785
[2026-01-10 10:00:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:43:23]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:43:23] 2026-01-10 11:42:38,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:43:23] 2026-01-10 11:42:39,574 | INFO     | time since job start (9698s) is within the limit (349056.0s)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,532 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 12:43:23] 2026-01-10 11:42:40,538 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2825.192583333333
[2026-01-10 12:43:23] 2026-01-10 11:42:40,544 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963168785/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,545 | INFO     | extracted standard info from prmon json
[2026-01-10 12:43:23] 2026-01-10 11:42:40,545 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:43:23] 2026-01-10 11:42:40,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:43:23] 2026-01-10 11:42:40,546 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:43:23] 2026-01-10 11:42:40,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:43:23] 2026-01-10 11:42:40,551 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:43:23] 2026-01-10 11:42:40,551 | INFO     | sum of square deviations: 1246386160.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | sum of deviations: 10388014641.999998
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | mean x: 1768040512.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | mean y: 2703802.427672956
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | intersect: -14733042883.258547
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | chi2: 2.1813587623749626
[2026-01-10 12:43:23] 2026-01-10 11:42:40,553 | INFO     | sum of square deviations: 1132458442.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,554 | INFO     | sum of deviations: 20894038420.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,554 | INFO     | mean x: 1768040359.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,554 | INFO     | mean y: 2717493.4025974027
[2026-01-10 12:43:23] 2026-01-10 11:42:40,554 | INFO     | intersect: -32617908406.080345
[2026-01-10 12:43:23] 2026-01-10 11:42:40,555 | INFO     | chi2: 1.4875067282199972
[2026-01-10 12:43:23] 2026-01-10 11:42:40,555 | INFO     | current chi2=1.4875067282199972 (change=31.80824934086181 %)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,555 | INFO     | sum of square deviations: 1025693650.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | sum of deviations: 20290114386.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | mean x: 1768040207.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | mean y: 2716630.489932886
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | intersect: -34972383428.94509
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | chi2: 1.4891101432107134
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | current chi2=1.4891101432107134 (change=-0.10779211685549545 %)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,556 | INFO     | right removable region: 148
[2026-01-10 12:43:23] 2026-01-10 11:42:40,557 | INFO     | sum of square deviations: 1132458442.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,557 | INFO     | sum of deviations: -14397332453.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,557 | INFO     | mean x: 1768040664.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,557 | INFO     | mean y: 2736473.149350649
[2026-01-10 12:43:23] 2026-01-10 11:42:40,558 | INFO     | intersect: 22480443630.26082
[2026-01-10 12:43:23] 2026-01-10 11:42:40,558 | INFO     | chi2: 0.8122304920884622
[2026-01-10 12:43:23] 2026-01-10 11:42:40,558 | INFO     | current chi2=0.8122304920884622 (change=62.76492862622271 %)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,558 | INFO     | sum of square deviations: 1025693650.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | sum of deviations: -11065536701.000002
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | mean x: 1768040817.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | mean y: 2731594.4161073826
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | intersect: 19076965454.964554
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | chi2: 0.7742705138714081
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | current chi2=0.7742705138714081 (change=4.67354754429975 %)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,559 | INFO     | left removable region: 20
[2026-01-10 12:43:23] 2026-01-10 11:42:40,560 | INFO     | sum of square deviations: 650252192.0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,560 | INFO     | sum of deviations: 3006877178.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,560 | INFO     | mean x: 1768040786.5
[2026-01-10 12:43:23] 2026-01-10 11:42:40,560 | INFO     | mean y: 2741387.7421875
[2026-01-10 12:43:23] 2026-01-10 11:42:40,560 | INFO     | intersect: -8172981134.980259
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | chi2: 0.0018334049635500597
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | current memory leak: 4.62 B/s (using 128 data points, chi2=0.00)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | could have reported an average CPU frequency of 2806 MHz (9 samples)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | ..............................
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | . Timing measurements:
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | . get job = 0 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,561 | INFO     | . initial setup = 1 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | . payload setup = 8 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | . stage-in = 0 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | . payload execution = 9658 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | . stage-out = 1 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | . log creation = 0 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,562 | INFO     | ..............................
[2026-01-10 12:43:23] 2026-01-10 11:42:40,632 | INFO     | 
[2026-01-10 12:43:23] 2026-01-10 11:42:40,632 | INFO     | job summary report
[2026-01-10 12:43:23] 2026-01-10 11:42:40,632 | INFO     | --------------------------------------------------
[2026-01-10 12:43:23] 2026-01-10 11:42:40,632 | INFO     | PanDA job id: 6963168785
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | task id: 47898826
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | errors: (none)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | pilot state: finished 
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | transexitcode: 0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,633 | INFO     | exeerrorcode: 0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | exeerrordiag: 
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | exitcode: 0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | exitmsg: OK
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | cpuconsumptiontime: 108209 s
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | nevents: 400
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | neventsw: 0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,634 | INFO     | pid: 442834
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | pgrp: 442834
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | corecount: 12
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | event service: False
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9670: 2312583, 9671: 2312582, 9672: 2321764, 9675: 2321820, 9681: 2322078}
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | --------------------------------------------------
[2026-01-10 12:43:23] 2026-01-10 11:42:40,635 | INFO     | 
[2026-01-10 12:43:23] 2026-01-10 11:42:40,636 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-10 12:43:23] 2026-01-10 11:42:40,655 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,655 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | job 6963168785 has completed (purged errors)
[2026-01-10 12:43:23] 2026-01-10 11:42:40,658 | INFO     | overall cleanup function is called
[2026-01-10 12:43:23] 2026-01-10 11:42:41,666 | INFO     | --- collectZombieJob: --- 10, [442834]
[2026-01-10 12:43:23] 2026-01-10 11:42:41,666 | INFO     | zombie collector waiting for pid 442834
[2026-01-10 12:43:23] 2026-01-10 11:42:41,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:43:23] 2026-01-10 11:42:41,667 | INFO     | collected zombie processes
[2026-01-10 12:43:23] 2026-01-10 11:42:41,667 | INFO     | will attempt to kill all subprocesses of pid=442834
[2026-01-10 12:43:23] 2026-01-10 11:42:41,855 | INFO     | process IDs to be killed: [442834] (in reverse order)
[2026-01-10 12:43:23] 2026-01-10 11:42:41,916 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:43:23] 2026-01-10 11:42:41,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:43:23] 2026-01-10 11:42:41,923 | INFO     | did not find any defunct processes belonging to 442834
[2026-01-10 12:43:23] 2026-01-10 11:42:41,930 | INFO     | did not find any defunct processes belonging to 442834
[2026-01-10 12:43:23] 2026-01-10 11:42:41,930 | INFO     | ready for new job
[2026-01-10 12:43:23] 2026-01-10 11:42:41,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:43:23] 2026-01-10 11:42:41,932 | INFO     | ***************************************
[2026-01-10 12:43:23] 2026-01-10 11:42:41,932 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:43:23] 2026-01-10 11:42:41,932 | INFO     | ***************************************
[2026-01-10 12:43:23] 2026-01-10 11:42:41,933 | INFO     | 
[2026-01-10 12:43:23] 2026-01-10 11:42:41,934 | INFO     | architecture information:
[2026-01-10 12:43:23] 2026-01-10 11:42:41,934 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:43:23] 2026-01-10 11:42:41,949 | INFO     | cat /etc/os-release:
[2026-01-10 12:43:23] NAME="CentOS Linux"
[2026-01-10 12:43:23] VERSION="7 (Core)"
[2026-01-10 12:43:23] ID="centos"
[2026-01-10 12:43:23] ID_LIKE="rhel fedora"
[2026-01-10 12:43:23] VERSION_ID="7"
[2026-01-10 12:43:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:43:23] ANSI_COLOR="0;31"
[2026-01-10 12:43:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:43:23] HOME_URL="https://www.centos.org/"
[2026-01-10 12:43:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:43:23] 
[2026-01-10 12:43:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:43:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:43:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:43:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:43:23] 
[2026-01-10 12:43:23] 2026-01-10 11:42:41,950 | INFO     | ***************************************
[2026-01-10 12:43:23] 2026-01-10 11:42:42,452 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-10 12:43:23] 2026-01-10 11:42:42,469 | INFO     | sufficient remaining disk space (566426075136 B)
[2026-01-10 12:43:23] 2026-01-10 11:42:42,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:43:23] 2026-01-10 11:42:42,470 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:43:23] 2026-01-10 11:42:42,470 | INFO     | update_server=False
[2026-01-10 12:43:23] 2026-01-10 11:42:42,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:43:23] 2026-01-10 11:42:42,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:43:23] 2026-01-10 11:42:42,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:43:23] 2026-01-10 11:42:42,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:43:23] 2026-01-10 11:42:42,472 | INFO     | aborting loop
[2026-01-10 12:43:23] 2026-01-10 11:42:43,340 | INFO     | all job control threads have been joined
[2026-01-10 12:43:23] 2026-01-10 11:42:43,476 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:43,477 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:43,478 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:43,530 | INFO     | all data control threads have been joined
[2026-01-10 12:43:23] 2026-01-10 11:42:43,844 | INFO     | all payload control threads have been joined
[2026-01-10 12:43:23] 2026-01-10 11:42:43,879 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,151 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,265 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,322 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,346 | INFO     | [job] control thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,478 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,536 | INFO     | [data] control thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,729 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,767 | INFO     | [job] validate thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:43:23] 2026-01-10 11:42:44,850 | INFO     | [payload] control thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:44,897 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:42:48,835 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:43:23] 2026-01-10 11:43:12,893 | INFO     | PID=435228 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 12:43:23] 2026-01-10 11:43:12,894 | INFO     | .. there are 2 such processes running
[2026-01-10 12:43:23] 2026-01-10 11:43:12,894 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:43:23] 2026-01-10 11:43:12,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:43:23] 2026-01-10 11:43:12,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:43:23] 2026-01-10 11:43:17,586 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:43:23] 2026-01-10 11:43:18,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423025866560)>', '<ExcThread(monitor, started 140422202517248)>']
[2026-01-10 12:43:23] 2026-01-10 11:43:18,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:43:23] 2026-01-10 11:43:18,925 | INFO     | [monitor] control thread has ended
[2026-01-10 12:43:23] 2026-01-10 11:43:23,262 | INFO     | all workflow threads have been joined
[2026-01-10 12:43:23] 2026-01-10 11:43:23,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:43:23] 2026-01-10 11:43:23,262 | INFO     | traces error code: 0
[2026-01-10 12:43:23] 2026-01-10 11:43:23,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:43:23] 2026-01-10 11:43:23,371 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:43:23] 2026-01-10 11:43:23,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:43:23] 2026-01-10 11:43:23,377 [wrapper] pilotpid: 435228
[2026-01-10 12:43:23] 2026-01-10 11:43:23,380 [wrapper] Pilot exit status: 0
[2026-01-10 12:43:23] 2026-01-10 11:43:23,389 [wrapper] pandaids: 6963168785
[2026-01-10 12:43:23] 2026-01-10 11:43:23,426 [wrapper] cleanup supervisor_pilot  491669 435229
[2026-01-10 12:43:23] 2026-01-10 11:43:23,429 [wrapper] Test setup, not cleaning
[2026-01-10 12:43:23] 2026-01-10 11:43:23,431 [wrapper] apfmon messages muted
[2026-01-10 12:43:23] 2026-01-10 11:43:23,434 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:43:23] 2026-01-10 11:43:23,436 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:43:23]  *** Error codes and diagnostics ***
[2026-01-10 12:43:23]     "exeErrorCode": 0,
[2026-01-10 12:43:23]     "exeErrorDiag": "",
[2026-01-10 12:43:23]     "pilotErrorCode": 0,
[2026-01-10 12:43:23]     "pilotErrorDiag": "",
[2026-01-10 12:43:23]  *** Listing of results directory ***
[2026-01-10 12:43:23] total 434908
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 12:43:23] -rwx------ 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:03 queuedata.json
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc       100 Jan 10 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:43:23] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 10:00 run_atlas
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc       105 Jan 10 10:00 job.xml
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc 223708105 Jan 10 10:00 EVNT.47898824._001391.pool.root.1
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc      6235 Jan 10 10:00 init_data.xml
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:00 start_atlas.sh
[2026-01-10 12:43:23] drwxrwx--x 2 boinc boinc        68 Jan 10 10:00 shared
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc    592399 Jan 10 10:00 input.tar.gz
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:00 boinc_lockfile
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc      2520 Jan 10 10:00 pandaJob.out
[2026-01-10 12:43:23] -rw------- 1 boinc boinc    989548 Jan 10 10:01 agis_schedconf.cvmfs.json
[2026-01-10 12:43:23] -rw------- 1 boinc boinc   1516240 Jan 10 10:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:43:23] drwx------ 5 boinc boinc      4096 Jan 10 10:01 pilot3
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc       531 Jan 10 12:41 boinc_task_state.xml
[2026-01-10 12:43:23] -rw------- 1 boinc boinc 214093462 Jan 10 12:41 HITS.47898826._036312.pool.root.1
[2026-01-10 12:43:23] -rw------- 1 boinc boinc        95 Jan 10 12:42 pilot_heartbeat.json
[2026-01-10 12:43:23] -rw------- 1 boinc boinc      1017 Jan 10 12:42 memory_monitor_summary.json
[2026-01-10 12:43:23] -rw------- 1 boinc boinc    459155 Jan 10 12:42 log.47898826._036312.job.log.tgz.1
[2026-01-10 12:43:23] -rw------- 1 boinc boinc      7787 Jan 10 12:42 heartbeat.json
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc      8192 Jan 10 12:43 boinc_mmap_file
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc        28 Jan 10 12:43 wrapper_checkpoint.txt
[2026-01-10 12:43:23] -rw------- 1 boinc boinc      4823 Jan 10 12:43 pilotlog.txt
[2026-01-10 12:43:23] -rw------- 1 boinc boinc   1359977 Jan 10 12:43 log.47898826._036312.job.log.1
[2026-01-10 12:43:23] -rw------- 1 boinc boinc       357 Jan 10 12:43 output.list
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc       620 Jan 10 12:43 runtime_log
[2026-01-10 12:43:23] -rw------- 1 boinc boinc   1843200 Jan 10 12:43 result.tar.gz
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc      8841 Jan 10 12:43 runtime_log.err
[2026-01-10 12:43:23] -rw------- 1 boinc boinc       660 Jan 10 12:43 DpLLDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB1lKDmOImKdm.diag
[2026-01-10 12:43:23] -rw-r--r-- 1 boinc boinc     21212 Jan 10 12:43 stderr.txt
[2026-01-10 12:43:23] HITS file was successfully produced:
[2026-01-10 12:43:23] -rw------- 1 boinc boinc 214093462 Jan 10 12:41 shared/HITS.pool.root.1
[2026-01-10 12:43:23]  *** Contents of shared directory: ***
[2026-01-10 12:43:23] total 429940
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc 223708105 Jan 10 10:00 ATLAS.root_0
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:00 start_atlas.sh
[2026-01-10 12:43:23] -rw-r--r-- 2 boinc boinc    592399 Jan 10 10:00 input.tar.gz
[2026-01-10 12:43:23] -rw------- 1 boinc boinc 214093462 Jan 10 12:41 HITS.pool.root.1
[2026-01-10 12:43:23] -rw------- 1 boinc boinc   1843200 Jan 10 12:43 result.tar.gz
12:43:25 (431364): run_atlas exited; CPU time 108391.170065
12:43:25 (431364): called boinc_finish(0)

</stderr_txt>
]]>

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