Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:39:01 (3749263): wrapper (7.7.26015): starting
14:39:01 (3749263): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:39:01] Arguments: --nthreads 8
[2026-01-09 14:39:01] Threads: 8
[2026-01-09 14:39:01] Checking for CVMFS
[2026-01-09 14:39:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:39:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:39:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:39:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:39:02] 2.13.3.0 12497 93705 228860 154955 3 363 29934702 32935937 23804 16776704 0 491058931 99.478 679164550 37881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:39:02] CVMFS is ok
[2026-01-09 14:39:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:39:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:39:02] Further information can be found at the LHC@home message board.
[2026-01-09 14:39:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:39:02] Checking for apptainer binary...
[2026-01-09 14:39:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:39:02] Running /usr/bin/apptainer --version
[2026-01-09 14:39:02] apptainer version 1.4.5-2.el9
[2026-01-09 14:39:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:39:03] c7-7-35.aglt2.org
[2026-01-09 14:39:03] apptainer works
[2026-01-09 14:39:03] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:39:03] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:39:03] Starting ATLAS job with PandaID=6963187048
[2026-01-09 14:39:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:06:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:06:25] 2026-01-10 01:05:46,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:06:25] 2026-01-10 01:05:47,283 | INFO     | time since job start (19580s) is within the limit (349056.0s)
[2026-01-09 20:06:25] 2026-01-10 01:05:49,187 | INFO     | PID=3753057 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 20:06:25] 2026-01-10 01:05:49,187 | INFO     | .. there are 20 such processes running
[2026-01-09 20:06:25] 2026-01-10 01:05:49,469 | INFO     | monitor loop #1198: job 0:6963187048 is in state 'finished'
[2026-01-09 20:06:25] 2026-01-10 01:05:49,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:06:25] 2026-01-10 01:05:50,187 | INFO     | time since job start (19583s) is within the limit (349056.0s)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,152 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:06:25] 2026-01-10 01:05:51,160 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3203.731604166667
[2026-01-09 20:06:25] 2026-01-10 01:05:51,198 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963187048/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,198 | INFO     | extracted standard info from prmon json
[2026-01-09 20:06:25] 2026-01-10 01:05:51,198 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:06:25] 2026-01-10 01:05:51,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:06:25] 2026-01-10 01:05:51,199 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:06:25] 2026-01-10 01:05:51,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:06:25] 2026-01-10 01:05:51,204 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:06:25] 2026-01-10 01:05:51,204 | INFO     | sum of square deviations: 10160711440.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,206 | INFO     | sum of deviations: 17940703442.499977
[2026-01-09 20:06:25] 2026-01-10 01:05:51,206 | INFO     | mean x: 1767997373.5
[2026-01-09 20:06:25] 2026-01-10 01:05:51,206 | INFO     | mean y: 2501261.159375
[2026-01-09 20:06:25] 2026-01-10 01:05:51,207 | INFO     | intersect: -3119240435.0187783
[2026-01-09 20:06:25] 2026-01-10 01:05:51,207 | INFO     | chi2: 3.925329597003852
[2026-01-09 20:06:25] 2026-01-10 01:05:51,207 | INFO     | sum of square deviations: 9691828230.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,209 | INFO     | sum of deviations: 37423076659.99999
[2026-01-09 20:06:25] 2026-01-10 01:05:51,209 | INFO     | mean x: 1767997221.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,209 | INFO     | mean y: 2507514.479365079
[2026-01-09 20:06:25] 2026-01-10 01:05:51,209 | INFO     | intersect: -6824263860.950794
[2026-01-09 20:06:25] 2026-01-10 01:05:51,210 | INFO     | chi2: 3.2560795370742115
[2026-01-09 20:06:25] 2026-01-10 01:05:51,210 | INFO     | current chi2=3.2560795370742115 (change=17.04952522816096 %)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,210 | INFO     | right removable region: 314
[2026-01-09 20:06:25] 2026-01-10 01:05:51,210 | INFO     | sum of square deviations: 9691828230.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,212 | INFO     | sum of deviations: -67415382322.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,212 | INFO     | mean x: 1767997526.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,212 | INFO     | mean y: 2528953.6507936507
[2026-01-09 20:06:25] 2026-01-10 01:05:51,212 | INFO     | intersect: 12300541911.691025
[2026-01-09 20:06:25] 2026-01-10 01:05:51,213 | INFO     | chi2: 1.1370875895473684
[2026-01-09 20:06:25] 2026-01-10 01:05:51,213 | INFO     | current chi2=1.1370875895473684 (change=71.03204810074315 %)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,213 | INFO     | sum of square deviations: 9237596457.5
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | sum of deviations: -77960717916.0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | mean x: 1767997678.5
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | mean y: 2532473.5161290322
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | intersect: 14923553209.139809
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | chi2: 1.0589810470334926
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | current chi2=1.0589810470334926 (change=6.868999647157093 %)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,215 | INFO     | left removable region: 20
[2026-01-09 20:06:25] 2026-01-10 01:05:51,216 | INFO     | sum of square deviations: 7879803557.5
[2026-01-09 20:06:25] 2026-01-10 01:05:51,217 | INFO     | sum of deviations: -32338184370.000004
[2026-01-09 20:06:25] 2026-01-10 01:05:51,217 | INFO     | mean x: 1767997800.5
[2026-01-09 20:06:25] 2026-01-10 01:05:51,218 | INFO     | mean y: 2530202.836734694
[2026-01-09 20:06:25] 2026-01-10 01:05:51,218 | INFO     | intersect: 7258274387.462429
[2026-01-09 20:06:25] 2026-01-10 01:05:51,218 | INFO     | chi2: 0.27685627444537214
[2026-01-09 20:06:25] 2026-01-10 01:05:51,218 | INFO     | current memory leak: -4.10 B/s (using 294 data points, chi2=0.28)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | could have reported an average CPU frequency of 3166 MHz (14 samples)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | ..............................
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . Timing measurements:
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . get job = 0 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . initial setup = 3 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . payload setup = 19 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . stage-in = 0 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . payload execution = 19506 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . stage-out = 4 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,219 | INFO     | . log creation = 0 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,220 | INFO     | ..............................
[2026-01-09 20:06:25] 2026-01-10 01:05:51,291 | INFO     | 
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | job summary report
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | --------------------------------------------------
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | PanDA job id: 6963187048
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | task id: 47898826
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | errors: (none)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:06:25] 2026-01-10 01:05:51,293 | INFO     | pilot state: finished 
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | transexitcode: 0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | exeerrorcode: 0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | exeerrordiag: 
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | exitcode: 0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | exitmsg: OK
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | cpuconsumptiontime: 46064 s
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | nevents: 400
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | neventsw: 0
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | pid: 3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | pgrp: 3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | corecount: 8
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | event service: False
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | sizes: {0: 2283799, 1: 2283998, 11: 2284260, 22: 2284288, 19531: 2317374, 19535: 2326400, 19537: 2326584, 19545: 2326778}
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | --------------------------------------------------
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | 
[2026-01-09 20:06:25] 2026-01-10 01:05:51,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 20:06:25] 2026-01-10 01:05:51,343 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | job 6963187048 has completed (purged errors)
[2026-01-09 20:06:25] 2026-01-10 01:05:51,345 | INFO     | overall cleanup function is called
[2026-01-09 20:06:25] 2026-01-10 01:05:52,359 | INFO     | --- collectZombieJob: --- 10, [3764898]
[2026-01-09 20:06:25] 2026-01-10 01:05:52,359 | INFO     | zombie collector waiting for pid 3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:52,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:06:25] 2026-01-10 01:05:52,359 | INFO     | collected zombie processes
[2026-01-09 20:06:25] 2026-01-10 01:05:52,359 | INFO     | will attempt to kill all subprocesses of pid=3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:53,342 | INFO     | process IDs to be killed: [3764898] (in reverse order)
[2026-01-09 20:06:25] 2026-01-10 01:05:53,515 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:06:25] 2026-01-10 01:05:53,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:06:25] 2026-01-10 01:05:53,534 | INFO     | did not find any defunct processes belonging to 3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:53,554 | INFO     | did not find any defunct processes belonging to 3764898
[2026-01-09 20:06:25] 2026-01-10 01:05:53,554 | INFO     | ready for new job
[2026-01-09 20:06:25] 2026-01-10 01:05:53,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:06:25] 2026-01-10 01:05:53,557 | INFO     | ***************************************
[2026-01-09 20:06:25] 2026-01-10 01:05:53,557 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:06:25] 2026-01-10 01:05:53,557 | INFO     | ***************************************
[2026-01-09 20:06:25] 2026-01-10 01:05:53,557 | INFO     | 
[2026-01-09 20:06:25] 2026-01-10 01:05:53,583 | INFO     | architecture information:
[2026-01-09 20:06:25] 2026-01-10 01:05:53,603 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:06:25] 2026-01-10 01:05:53,642 | INFO     | cat /etc/os-release:
[2026-01-09 20:06:25] NAME="CentOS Linux"
[2026-01-09 20:06:25] VERSION="7 (Core)"
[2026-01-09 20:06:25] ID="centos"
[2026-01-09 20:06:25] ID_LIKE="rhel fedora"
[2026-01-09 20:06:25] VERSION_ID="7"
[2026-01-09 20:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:06:25] ANSI_COLOR="0;31"
[2026-01-09 20:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:06:25] HOME_URL="https://www.centos.org/"
[2026-01-09 20:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:06:25] 
[2026-01-09 20:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:06:25] 
[2026-01-09 20:06:25] 2026-01-10 01:05:53,642 | INFO     | ***************************************
[2026-01-09 20:06:25] 2026-01-10 01:05:54,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 20:06:25] 2026-01-10 01:05:54,187 | INFO     | sufficient remaining disk space (73428631552 B)
[2026-01-09 20:06:25] 2026-01-10 01:05:54,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:06:25] 2026-01-10 01:05:54,187 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:06:25] 2026-01-10 01:05:54,187 | INFO     | update_server=False
[2026-01-09 20:06:25] 2026-01-10 01:05:54,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:06:25] 2026-01-10 01:05:54,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:06:25] 2026-01-10 01:05:54,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:06:25] 2026-01-10 01:05:54,486 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:06:25] 2026-01-10 01:05:54,486 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:06:25] 2026-01-10 01:05:54,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:06:25] 2026-01-10 01:05:54,486 | INFO     | will abort loop
[2026-01-09 20:06:25] 2026-01-10 01:05:54,586 | INFO     | all data control threads have been joined
[2026-01-09 20:06:25] 2026-01-10 01:05:54,904 | INFO     | all job control threads have been joined
[2026-01-09 20:06:25] 2026-01-10 01:05:55,192 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,466 | INFO     | all payload control threads have been joined
[2026-01-09 20:06:25] 2026-01-10 01:05:55,492 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,618 | INFO     | [data] control thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,846 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,853 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,880 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:55,910 | INFO     | [job] control thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,020 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,020 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,163 | INFO     | [job] validate thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,204 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:06:25] 2026-01-10 01:05:56,472 | INFO     | [payload] control thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:56,553 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:57,307 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:05:58,199 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:06:25] 2026-01-10 01:06:01,867 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:06:25] 2026-01-10 01:06:02,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478686549824)>', '<ExcThread(monitor, started 140478330672896)>']
[2026-01-09 20:06:25] 2026-01-10 01:06:07,066 | INFO     | all workflow threads have been joined
[2026-01-09 20:06:25] 2026-01-10 01:06:07,066 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:06:25] 2026-01-10 01:06:07,066 | INFO     | traces error code: 0
[2026-01-09 20:06:25] 2026-01-10 01:06:07,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | INFO     | PID=3753057 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | INFO     | .. there are 20 such processes running
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:06:25] 2026-01-10 01:06:24,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:06:25] 2026-01-10 01:06:24,001 | INFO     | [monitor] control thread has ended
[2026-01-09 20:06:25] 2026-01-10 01:06:24,705 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:06:25] 2026-01-10 01:06:24,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:06:25] 2026-01-10 01:06:24,736 [wrapper] pilotpid: 3753057
[2026-01-09 20:06:25] 2026-01-10 01:06:24,740 [wrapper] Pilot exit status: 0
[2026-01-09 20:06:25] 2026-01-10 01:06:24,756 [wrapper] pandaids: 6963187048
[2026-01-09 20:06:25] 2026-01-10 01:06:24,865 [wrapper] cleanup supervisor_pilot  665144 3753058
[2026-01-09 20:06:25] 2026-01-10 01:06:24,869 [wrapper] Test setup, not cleaning
[2026-01-09 20:06:25] 2026-01-10 01:06:24,872 [wrapper] apfmon messages muted
[2026-01-09 20:06:25] 2026-01-10 01:06:24,874 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:06:25] 2026-01-10 01:06:24,877 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:06:25]  *** Error codes and diagnostics ***
[2026-01-09 20:06:25]     "exeErrorCode": 0,
[2026-01-09 20:06:25]     "exeErrorDiag": "",
[2026-01-09 20:06:25]     "pilotErrorCode": 0,
[2026-01-09 20:06:25]     "pilotErrorDiag": "",
[2026-01-09 20:06:25]  *** Listing of results directory ***
[2026-01-09 20:06:25] total 448724
[2026-01-09 20:06:25] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:06:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:39 run_atlas
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:39 job.xml
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas 225949498 Jan  9 14:39 EVNT.47898824._001417.pool.root.1
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:39 start_atlas.sh
[2026-01-09 20:06:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:39 shared
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:39 input.tar.gz
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:39 boinc_lockfile
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 14:39 pandaJob.out
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas        57 Jan  9 14:39 setup.sh.local
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas    989364 Jan  9 14:39 agis_schedconf.cvmfs.json
[2026-01-09 20:06:25] drwx------. 5 boincer umatlas      4096 Jan  9 14:39 pilot3
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 20:03 init_data.xml
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas 223653194 Jan  9 20:04 HITS.47898826._036956.pool.root.1
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:04 boinc_task_state.xml
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas      1040 Jan  9 20:05 memory_monitor_summary.json
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas    514321 Jan  9 20:05 log.47898826._036956.job.log.tgz.1
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas        95 Jan  9 20:05 pilot_heartbeat.json
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas      7789 Jan  9 20:05 heartbeat.json
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:06 boinc_mmap_file
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:06 wrapper_checkpoint.txt
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas       823 Jan  9 20:06 pilotlog.txt
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas   2474774 Jan  9 20:06 log.47898826._036956.job.log.1
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas       357 Jan  9 20:06 output.list
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:06 runtime_log
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas   3010560 Jan  9 20:06 result.tar.gz
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 20:06 runtime_log.err
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas       656 Jan  9 20:06 OpfLDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH4lKDm7vzREn.diag
[2026-01-09 20:06:25] -rw-r--r--. 1 boincer umatlas     21405 Jan  9 20:06 stderr.txt
[2026-01-09 20:06:25] HITS file was successfully produced:
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas 223653194 Jan  9 20:04 shared/HITS.pool.root.1
[2026-01-09 20:06:25]  *** Contents of shared directory: ***
[2026-01-09 20:06:25] total 442608
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas 225949498 Jan  9 14:39 ATLAS.root_0
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:39 start_atlas.sh
[2026-01-09 20:06:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:39 input.tar.gz
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas 223653194 Jan  9 20:04 HITS.pool.root.1
[2026-01-09 20:06:25] -rw-------. 1 boincer umatlas   3010560 Jan  9 20:06 result.tar.gz
20:06:26 (3749263): run_atlas exited; CPU time 46779.894385
20:06:26 (3749263): called boinc_finish(0)

</stderr_txt>
]]>

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