Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:01 (2541): wrapper (7.7.26015): starting
03:38:01 (2541): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 03:38:01] Arguments: --nthreads 8
[2026-01-10 03:38:01] Threads: 8
[2026-01-10 03:38:01] Checking for CVMFS
[2026-01-10 03:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:38:04] 2.11.2.0 23802 36265 98340 154964 0 85 12641632 25165825 96 130560 0 15956408 99.790 10628618 3700 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 03:38:04] CVMFS is ok
[2026-01-10 03:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:38:04] Checking for apptainer binary...
[2026-01-10 03:38:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:38:04] Running /usr/bin/apptainer --version
[2026-01-10 03:38:05] apptainer version 1.3.2-1.el7
[2026-01-10 03:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:38:30] cg-vwn426.simple-grid.lan
[2026-01-10 03:38:30] apptainer works
[2026-01-10 03:38:30] Set ATHENA_PROC_NUMBER=8
[2026-01-10 03:38:30] Set ATHENA_CORE_NUMBER=8
[2026-01-10 03:38:31] Starting ATLAS job with PandaID=6963167208
[2026-01-10 03:38:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:53:47]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:53:47] 2026-01-10 08:52:57,627 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:53:47] 2026-01-10 08:52:57,628 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 09:53:47] 2026-01-10 08:52:57,630 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6963167208/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,631 | INFO     | extracted standard info from prmon json
[2026-01-10 09:53:47] 2026-01-10 08:52:57,631 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:53:47] 2026-01-10 08:52:57,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:53:47] 2026-01-10 08:52:57,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 09:53:47] 2026-01-10 08:52:57,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 09:53:47] 2026-01-10 08:52:57,639 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:53:47] 2026-01-10 08:52:57,640 | INFO     | sum of square deviations: 13639518992.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,644 | INFO     | sum of deviations: 205826976042.00003
[2026-01-10 09:53:47] 2026-01-10 08:52:57,644 | INFO     | mean x: 1768024259.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,644 | INFO     | mean y: 2439686.5665722378
[2026-01-10 09:53:47] 2026-01-10 08:52:57,644 | INFO     | intersect: -26677906373.460224
[2026-01-10 09:53:47] 2026-01-10 08:52:57,645 | INFO     | chi2: 7.617224863586843
[2026-01-10 09:53:47] 2026-01-10 08:52:57,646 | INFO     | sum of square deviations: 13068103627.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,656 | INFO     | sum of deviations: 226049510693.5
[2026-01-10 09:53:47] 2026-01-10 08:52:57,656 | INFO     | mean x: 1768024106.5
[2026-01-10 09:53:47] 2026-01-10 08:52:57,657 | INFO     | mean y: 2445011.7155172415
[2026-01-10 09:53:47] 2026-01-10 08:52:57,657 | INFO     | intersect: -30580491547.10532
[2026-01-10 09:53:47] 2026-01-10 08:52:57,657 | INFO     | chi2: 6.8846342031753505
[2026-01-10 09:53:47] 2026-01-10 08:52:57,658 | INFO     | current chi2=6.8846342031753505 (change=9.617553289171592 %)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,658 | INFO     | right removable region: 347
[2026-01-10 09:53:47] 2026-01-10 08:52:57,658 | INFO     | sum of square deviations: 13068103627.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,662 | INFO     | sum of deviations: 82919126065.49997
[2026-01-10 09:53:47] 2026-01-10 08:52:57,662 | INFO     | mean x: 1768024411.5
[2026-01-10 09:53:47] 2026-01-10 08:52:57,663 | INFO     | mean y: 2472471.8362068967
[2026-01-10 09:53:47] 2026-01-10 08:52:57,663 | INFO     | intersect: -11215914162.407606
[2026-01-10 09:53:47] 2026-01-10 08:52:57,663 | INFO     | chi2: 2.861394656227355
[2026-01-10 09:53:47] 2026-01-10 08:52:57,663 | INFO     | current chi2=2.861394656227355 (change=62.435208261923826 %)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,664 | INFO     | sum of square deviations: 12512874612.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,668 | INFO     | sum of deviations: 2952835357.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,668 | INFO     | mean x: 1768024564.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,668 | INFO     | mean y: 2494392.2390670553
[2026-01-10 09:53:47] 2026-01-10 08:52:57,668 | INFO     | intersect: -414730714.42163646
[2026-01-10 09:53:47] 2026-01-10 08:52:57,669 | INFO     | chi2: 0.860913617393312
[2026-01-10 09:53:47] 2026-01-10 08:52:57,669 | INFO     | current chi2=0.860913617393312 (change=69.91279705091797 %)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,670 | INFO     | sum of square deviations: 11973599384.5
[2026-01-10 09:53:47] 2026-01-10 08:52:57,673 | INFO     | sum of deviations: -7312880568.000004
[2026-01-10 09:53:47] 2026-01-10 08:52:57,674 | INFO     | mean x: 1768024716.5
[2026-01-10 09:53:47] 2026-01-10 08:52:57,674 | INFO     | mean y: 2497278.4911242602
[2026-01-10 09:53:47] 2026-01-10 08:52:57,674 | INFO     | intersect: 1082319074.5814295
[2026-01-10 09:53:47] 2026-01-10 08:52:57,674 | INFO     | chi2: 0.8129814454131411
[2026-01-10 09:53:47] 2026-01-10 08:52:57,674 | INFO     | current chi2=0.8129814454131411 (change=5.567593660012099 %)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,675 | INFO     | left removable region: 30
[2026-01-10 09:53:47] 2026-01-10 08:52:57,675 | INFO     | sum of square deviations: 9877610318.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,691 | INFO     | sum of deviations: 14397631323.000002
[2026-01-10 09:53:47] 2026-01-10 08:52:57,691 | INFO     | mean x: 1768024991.0
[2026-01-10 09:53:47] 2026-01-10 08:52:57,691 | INFO     | mean y: 2503931.949526814
[2026-01-10 09:53:47] 2026-01-10 08:52:57,691 | INFO     | intersect: -2574574042.45497
[2026-01-10 09:53:47] 2026-01-10 08:52:57,692 | INFO     | chi2: 0.0014513275517497697
[2026-01-10 09:53:47] 2026-01-10 08:52:57,692 | INFO     | current memory leak: 1.46 B/s (using 317 data points, chi2=0.00)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,693 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 09:53:47] 2026-01-10 08:52:57,693 | INFO     | ..............................
[2026-01-10 09:53:47] 2026-01-10 08:52:57,693 | INFO     | . Timing measurements:
[2026-01-10 09:53:47] 2026-01-10 08:52:57,693 | INFO     | . get job = 0 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . initial setup = 8 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . payload setup = 155 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . stage-in = 0 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . payload execution = 21701 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . stage-out = 3 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | . log creation = 1 s
[2026-01-10 09:53:47] 2026-01-10 08:52:57,694 | INFO     | ..............................
[2026-01-10 09:53:47] 2026-01-10 08:52:58,253 | INFO     | 
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | job summary report
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | --------------------------------------------------
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | PanDA job id: 6963167208
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | task id: 47898826
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | errors: (none)
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | pilot state: finished 
[2026-01-10 09:53:47] 2026-01-10 08:52:58,254 | INFO     | transexitcode: 0
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | exeerrorcode: 0
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | exeerrordiag: 
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | exitcode: 0
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | exitmsg: OK
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | cpuconsumptiontime: 81481 s
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | nevents: 400
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | neventsw: 0
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | pid: 12777
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | pgrp: 12777
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | corecount: 8
[2026-01-10 09:53:47] 2026-01-10 08:52:58,255 | INFO     | event service: False
[2026-01-10 09:53:47] 2026-01-10 08:52:58,256 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 35: 2284111, 45: 2284267, 56: 2284295, 67: 2284323, 78: 2284351, 88: 2284407, 99: 2284715, 10
[2026-01-10 09:53:47] 2026-01-10 08:52:58,256 | INFO     | --------------------------------------------------
[2026-01-10 09:53:47] 2026-01-10 08:52:58,256 | INFO     | 
[2026-01-10 09:53:47] 2026-01-10 08:52:58,256 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 09:53:47] 2026-01-10 08:52:58,698 | INFO     | time since job start (22199s) is within the limit (349056.0s)
[2026-01-10 09:53:47] 2026-01-10 08:52:58,893 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,893 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,893 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:53:47] 2026-01-10 08:52:58,895 | INFO     | job 6963167208 has completed (purged errors)
[2026-01-10 09:53:47] 2026-01-10 08:52:58,896 | INFO     | overall cleanup function is called
[2026-01-10 09:53:47] 2026-01-10 08:52:59,904 | INFO     | --- collectZombieJob: --- 10, [12777]
[2026-01-10 09:53:47] 2026-01-10 08:52:59,905 | INFO     | zombie collector waiting for pid 12777
[2026-01-10 09:53:47] 2026-01-10 08:52:59,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:53:47] 2026-01-10 08:52:59,905 | INFO     | collected zombie processes
[2026-01-10 09:53:47] 2026-01-10 08:52:59,905 | INFO     | will attempt to kill all subprocesses of pid=12777
[2026-01-10 09:53:47] 2026-01-10 08:52:59,987 | INFO     | process IDs to be killed: [12777] (in reverse order)
[2026-01-10 09:53:47] 2026-01-10 08:53:00,629 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:53:47] 2026-01-10 08:53:00,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:53:47] 2026-01-10 08:53:00,632 | INFO     | did not find any defunct processes belonging to 12777
[2026-01-10 09:53:47] 2026-01-10 08:53:00,634 | INFO     | did not find any defunct processes belonging to 12777
[2026-01-10 09:53:47] 2026-01-10 08:53:00,634 | INFO     | ready for new job
[2026-01-10 09:53:47] 2026-01-10 08:53:00,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:53:47] 2026-01-10 08:53:00,637 | INFO     | ***************************************
[2026-01-10 09:53:47] 2026-01-10 08:53:00,637 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:53:47] 2026-01-10 08:53:00,637 | INFO     | ***************************************
[2026-01-10 09:53:47] 2026-01-10 08:53:00,637 | INFO     | 
[2026-01-10 09:53:47] 2026-01-10 08:53:00,645 | INFO     | pilot is running in a VM
[2026-01-10 09:53:47] 2026-01-10 08:53:00,645 | INFO     | architecture information:
[2026-01-10 09:53:47] 2026-01-10 08:53:00,653 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:53:47] 2026-01-10 08:53:00,962 | INFO     | cat /etc/os-release:
[2026-01-10 09:53:47] NAME="CentOS Linux"
[2026-01-10 09:53:47] VERSION="7 (Core)"
[2026-01-10 09:53:47] ID="centos"
[2026-01-10 09:53:47] ID_LIKE="rhel fedora"
[2026-01-10 09:53:47] VERSION_ID="7"
[2026-01-10 09:53:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:53:47] ANSI_COLOR="0;31"
[2026-01-10 09:53:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:53:47] HOME_URL="https://www.centos.org/"
[2026-01-10 09:53:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:53:47] 
[2026-01-10 09:53:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:53:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:53:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:53:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:53:47] 
[2026-01-10 09:53:47] 2026-01-10 08:53:00,963 | INFO     | ***************************************
[2026-01-10 09:53:47] 2026-01-10 08:53:01,466 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 09:53:47] 2026-01-10 08:53:01,756 | INFO     | sufficient remaining disk space (496832086016 B)
[2026-01-10 09:53:47] 2026-01-10 08:53:01,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:53:47] 2026-01-10 08:53:01,757 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:53:47] 2026-01-10 08:53:01,757 | INFO     | update_server=False
[2026-01-10 09:53:47] 2026-01-10 08:53:01,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:53:47] 2026-01-10 08:53:01,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:53:47] 2026-01-10 08:53:02,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:53:47] 2026-01-10 08:53:02,031 | INFO     | aborting loop
[2026-01-10 09:53:47] 2026-01-10 08:53:02,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:53:47] 2026-01-10 08:53:02,439 | INFO     | all data control threads have been joined
[2026-01-10 09:53:47] 2026-01-10 08:53:02,763 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:02,887 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:02,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:53:47] 2026-01-10 08:53:02,898 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:02,944 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,038 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,260 | INFO     | all payload control threads have been joined
[2026-01-10 09:53:47] 2026-01-10 08:53:03,277 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,306 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,370 | INFO     | all job control threads have been joined
[2026-01-10 09:53:47] 2026-01-10 08:53:03,446 | INFO     | [data] control thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,564 | INFO     | [job] validate thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,709 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:03,896 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:04,267 | INFO     | [payload] control thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:04,377 | INFO     | [job] control thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:04,442 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:05,772 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:53:47] 2026-01-10 08:53:31,836 | INFO     | PID=6308 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 09:53:47] 2026-01-10 08:53:31,836 | INFO     | .. there are 2 such processes running
[2026-01-10 09:53:47] 2026-01-10 08:53:31,837 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:53:47] 2026-01-10 08:53:31,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:53:47] 2026-01-10 08:53:31,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:53:47] 2026-01-10 08:53:36,619 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:53:47] 2026-01-10 08:53:37,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868897359680)>', '<ExcThread(monitor, started 139868445316864)>']
[2026-01-10 09:53:47] 2026-01-10 08:53:37,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:53:47] 2026-01-10 08:53:37,872 | INFO     | [monitor] control thread has ended
[2026-01-10 09:53:47] 2026-01-10 08:53:42,191 | INFO     | all workflow threads have been joined
[2026-01-10 09:53:47] 2026-01-10 08:53:42,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:53:47] 2026-01-10 08:53:42,192 | INFO     | traces error code: 0
[2026-01-10 09:53:47] 2026-01-10 08:53:42,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:53:47] 2026-01-10 08:53:42,621 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:53:47] 2026-01-10 08:53:42,676 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:53:47] 2026-01-10 08:53:42,753 [wrapper] pilotpid: 6308
[2026-01-10 09:53:47] 2026-01-10 08:53:42,875 [wrapper] Pilot exit status: 0
[2026-01-10 09:53:47] 2026-01-10 08:53:43,493 [wrapper] pandaids: 6963167208
[2026-01-10 09:53:47] 2026-01-10 08:53:44,445 [wrapper] cleanup supervisor_pilot 12075 6309
[2026-01-10 09:53:47] 2026-01-10 08:53:44,556 [wrapper] Test setup, not cleaning
[2026-01-10 09:53:47] 2026-01-10 08:53:44,661 [wrapper] apfmon messages muted
[2026-01-10 09:53:47] 2026-01-10 08:53:44,761 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:53:47] 2026-01-10 08:53:44,871 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:53:47]  *** Error codes and diagnostics ***
[2026-01-10 09:53:47]     "exeErrorCode": 0,
[2026-01-10 09:53:47]     "exeErrorDiag": "",
[2026-01-10 09:53:47]     "pilotErrorCode": 0,
[2026-01-10 09:53:47]     "pilotErrorDiag": "",
[2026-01-10 09:53:47]  *** Listing of results directory ***
[2026-01-10 09:53:47] total 452056
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 09:53:47] -rwx------. 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc       100 Jan 10 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:53:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 03:38 run_atlas
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc       105 Jan 10 03:38 job.xml
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc 226709512 Jan 10 03:38 EVNT.47898824._001379.pool.root.1
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:38 start_atlas.sh
[2026-01-10 09:53:47] drwxrwx--x. 2 boinc boinc        68 Jan 10 03:38 shared
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc    592405 Jan 10 03:38 input.tar.gz
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc      6390 Jan 10 03:38 init_data.xml
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc         0 Jan 10 03:38 boinc_lockfile
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc      2520 Jan 10 03:38 pandaJob.out
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc    989382 Jan 10 03:42 agis_schedconf.cvmfs.json
[2026-01-10 09:53:47] drwx------. 5 boinc boinc      4096 Jan 10 03:42 pilot3
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc 225266333 Jan 10 09:49 HITS.47898826._035583.pool.root.1
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc       531 Jan 10 09:49 boinc_task_state.xml
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc      1010 Jan 10 09:50 memory_monitor_summary.json
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc   1516240 Jan 10 09:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc    555823 Jan 10 09:51 log.47898826._035583.job.log.tgz.1
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc        95 Jan 10 09:52 pilot_heartbeat.json
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc      7774 Jan 10 09:52 heartbeat.json
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc      4883 Jan 10 09:53 pilotlog.txt
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc   2955984 Jan 10 09:53 log.47898826._035583.job.log.1
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc       357 Jan 10 09:53 output.list
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc       620 Jan 10 09:53 runtime_log
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc   3532800 Jan 10 09:53 result.tar.gz
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc      8817 Jan 10 09:53 runtime_log.err
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc       657 Jan 10 09:53 m2bNDmM1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPlgKDmyRIX6m.diag
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc        28 Jan 10 09:53 wrapper_checkpoint.txt
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc      8192 Jan 10 09:53 boinc_mmap_file
[2026-01-10 09:53:47] -rw-r--r--. 1 boinc boinc     20775 Jan 10 09:53 stderr.txt
[2026-01-10 09:53:47] HITS file was successfully produced:
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc 225266333 Jan 10 09:49 shared/HITS.pool.root.1
[2026-01-10 09:53:47]  *** Contents of shared directory: ***
[2026-01-10 09:53:47] total 445436
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc 226709512 Jan 10 03:38 ATLAS.root_0
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:38 start_atlas.sh
[2026-01-10 09:53:47] -rw-r--r--. 2 boinc boinc    592405 Jan 10 03:38 input.tar.gz
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc 225266333 Jan 10 09:49 HITS.pool.root.1
[2026-01-10 09:53:47] -rw-------. 1 boinc boinc   3532800 Jan 10 09:53 result.tar.gz
09:53:49 (2541): run_atlas exited; CPU time 81696.308797
09:53:49 (2541): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN