Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:15:21 (833374): wrapper (7.7.26015): starting
13:15:21 (833374): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 13:15:21] Arguments: --nthreads 9
[2026-01-09 13:15:21] Threads: 9
[2026-01-09 13:15:21] Checking for CVMFS
[2026-01-09 13:15:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:15:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:15:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:15:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:15:23] 2.13.3.0 1263916 17270 180336 154951 3 384 29814060 40960000 13170 16776704 0 21205395 99.561 21321925 42044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:15:23] CVMFS is ok
[2026-01-09 13:15:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:15:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:15:23] Further information can be found at the LHC@home message board.
[2026-01-09 13:15:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:15:23] Checking for apptainer binary...
[2026-01-09 13:15:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:15:23] Running /usr/bin/apptainer --version
[2026-01-09 13:15:23] apptainer version 1.4.5-2.el9
[2026-01-09 13:15:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:15:24] c-206-34.aglt2.org
[2026-01-09 13:15:24] apptainer works
[2026-01-09 13:15:24] Set ATHENA_PROC_NUMBER=9
[2026-01-09 13:15:24] Set ATHENA_CORE_NUMBER=9
[2026-01-09 13:15:24] Starting ATLAS job with PandaID=6963187018
[2026-01-09 13:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:31:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:31:30] 2026-01-10 01:30:50,410 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.525999999999
[2026-01-09 20:31:30] 2026-01-10 01:30:50,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187018/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,420 | INFO     | extracted standard info from prmon json
[2026-01-09 20:31:30] 2026-01-10 01:30:50,420 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:31:30] 2026-01-10 01:30:50,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:31:30] 2026-01-10 01:30:50,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:31:30] 2026-01-10 01:30:50,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:31:30] 2026-01-10 01:30:50,426 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:31:30] 2026-01-10 01:30:50,426 | INFO     | sum of square deviations: 23803415527.162228
[2026-01-09 20:31:30] 2026-01-10 01:30:50,430 | INFO     | sum of deviations: 160514774319.46344
[2026-01-09 20:31:30] 2026-01-10 01:30:50,430 | INFO     | mean x: 1767995642.6094117
[2026-01-09 20:31:30] 2026-01-10 01:30:50,430 | INFO     | mean y: 2553017.3341176473
[2026-01-09 20:31:30] 2026-01-10 01:30:50,431 | INFO     | intersect: -11919661307.219875
[2026-01-09 20:31:30] 2026-01-10 01:30:50,431 | INFO     | chi2: 4.665077437526986
[2026-01-09 20:31:30] 2026-01-10 01:30:50,432 | INFO     | sum of square deviations: 22973157701.740482
[2026-01-09 20:31:30] 2026-01-10 01:30:50,435 | INFO     | sum of deviations: 185196463111.22394
[2026-01-09 20:31:30] 2026-01-10 01:30:50,435 | INFO     | mean x: 1767995490.1119049
[2026-01-09 20:31:30] 2026-01-10 01:30:50,435 | INFO     | mean y: 2557503.995238095
[2026-01-09 20:31:30] 2026-01-10 01:30:50,435 | INFO     | intersect: -14250011333.788578
[2026-01-09 20:31:30] 2026-01-10 01:30:50,436 | INFO     | chi2: 3.9865680767568543
[2026-01-09 20:31:30] 2026-01-10 01:30:50,436 | INFO     | current chi2=3.9865680767568543 (change=14.544439397983885 %)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,436 | INFO     | right removable region: 419
[2026-01-09 20:31:30] 2026-01-10 01:30:50,436 | INFO     | sum of square deviations: 22973051195.283333
[2026-01-09 20:31:30] 2026-01-10 01:30:50,440 | INFO     | sum of deviations: 32248820477.53337
[2026-01-09 20:31:30] 2026-01-10 01:30:50,440 | INFO     | mean x: 1767995795.1166666
[2026-01-09 20:31:30] 2026-01-10 01:30:50,440 | INFO     | mean y: 2576549.1523809526
[2026-01-09 20:31:30] 2026-01-10 01:30:50,440 | INFO     | intersect: -2479278321.4560704
[2026-01-09 20:31:30] 2026-01-10 01:30:50,441 | INFO     | chi2: 1.4642405287542826
[2026-01-09 20:31:30] 2026-01-10 01:30:50,441 | INFO     | current chi2=1.4642405287542826 (change=68.6127283338196 %)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,441 | INFO     | sum of square deviations: 22162222113.359005
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | sum of deviations: -15701294820.306023
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | mean x: 1767995947.6240964
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | mean y: 2585532.85060241
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | intersect: 1255159641.7446342
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | chi2: 0.8780104160453615
[2026-01-09 20:31:30] 2026-01-10 01:30:50,445 | INFO     | current chi2=0.8780104160453615 (change=40.03646267103823 %)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,446 | INFO     | sum of square deviations: 21370695718.88772
[2026-01-09 20:31:30] 2026-01-10 01:30:50,449 | INFO     | sum of deviations: -21870384737.30244
[2026-01-09 20:31:30] 2026-01-10 01:30:50,449 | INFO     | mean x: 1767996100.1317074
[2026-01-09 20:31:30] 2026-01-10 01:30:50,449 | INFO     | mean y: 2586714.2463414636
[2026-01-09 20:31:30] 2026-01-10 01:30:50,450 | INFO     | intersect: 1811922050.4729722
[2026-01-09 20:31:30] 2026-01-10 01:30:50,450 | INFO     | chi2: 0.8636448083279518
[2026-01-09 20:31:30] 2026-01-10 01:30:50,450 | INFO     | current chi2=0.8636448083279518 (change=1.6361545893855893 %)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,450 | INFO     | left removable region: 30
[2026-01-09 20:31:30] 2026-01-10 01:30:50,451 | INFO     | sum of square deviations: 18252330475.449966
[2026-01-09 20:31:30] 2026-01-10 01:30:50,454 | INFO     | sum of deviations: 34125822975.380478
[2026-01-09 20:31:30] 2026-01-10 01:30:50,454 | INFO     | mean x: 1767996374.622108
[2026-01-09 20:31:30] 2026-01-10 01:30:50,454 | INFO     | mean y: 2585626.560411311
[2026-01-09 20:31:30] 2026-01-10 01:30:50,454 | INFO     | intersect: -3302983017.5434384
[2026-01-09 20:31:30] 2026-01-10 01:30:50,454 | INFO     | chi2: 0.014503054946108235
[2026-01-09 20:31:30] 2026-01-10 01:30:50,455 | INFO     | current memory leak: 1.87 B/s (using 389 data points, chi2=0.01)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | could have reported an average CPU frequency of 3290 MHz (18 samples)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | ..............................
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . Timing measurements:
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . get job = 0 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . initial setup = 6 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . payload setup = 34 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . stage-in = 0 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . payload execution = 25918 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . stage-out = 5 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | . log creation = 1 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,456 | INFO     | ..............................
[2026-01-09 20:31:30] 2026-01-10 01:30:50,872 | INFO     | 
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | job summary report
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | --------------------------------------------------
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | PanDA job id: 6963187018
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | task id: 47898826
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | errors: (none)
[2026-01-09 20:31:30] 2026-01-10 01:30:50,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | pilot state: finished 
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | transexitcode: 0
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | exeerrorcode: 0
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | exeerrordiag: 
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | exitcode: 0
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | exitmsg: OK
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | cpuconsumptiontime: 45664 s
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | nevents: 400
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | neventsw: 0
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | pid: 847249
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | pgrp: 847249
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | corecount: 9
[2026-01-09 20:31:30] 2026-01-10 01:30:50,912 | INFO     | event service: False
[2026-01-09 20:31:30] 2026-01-10 01:30:50,913 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 3: 2284024, 13: 2284052, 24: 2284108, 30: 2284526, 36: 2284554, 25957: 2320762, 25963: 2329816, 25996: 2329954}
[2026-01-09 20:31:30] 2026-01-10 01:30:50,913 | INFO     | --------------------------------------------------
[2026-01-09 20:31:30] 2026-01-10 01:30:50,913 | INFO     | 
[2026-01-09 20:31:30] 2026-01-10 01:30:50,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:31:30] 2026-01-10 01:30:51,230 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | job 6963187018 has completed (purged errors)
[2026-01-09 20:31:30] 2026-01-10 01:30:51,232 | INFO     | overall cleanup function is called
[2026-01-09 20:31:30] 2026-01-10 01:30:52,385 | INFO     | --- collectZombieJob: --- 10, [847249]
[2026-01-09 20:31:30] 2026-01-10 01:30:52,385 | INFO     | zombie collector waiting for pid 847249
[2026-01-09 20:31:30] 2026-01-10 01:30:52,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:31:30] 2026-01-10 01:30:52,386 | INFO     | collected zombie processes
[2026-01-09 20:31:30] 2026-01-10 01:30:52,386 | INFO     | will attempt to kill all subprocesses of pid=847249
[2026-01-09 20:31:30] 2026-01-10 01:30:53,035 | INFO     | PID=839763 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 20:31:30] 2026-01-10 01:30:53,035 | INFO     | .. there are 11 such processes running
[2026-01-09 20:31:30] 2026-01-10 01:30:54,963 | INFO     | process IDs to be killed: [847249] (in reverse order)
[2026-01-09 20:31:30] 2026-01-10 01:30:55,631 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:31:30] 2026-01-10 01:30:55,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:31:30] 2026-01-10 01:30:55,734 | INFO     | did not find any defunct processes belonging to 847249
[2026-01-09 20:31:30] 2026-01-10 01:30:55,833 | INFO     | did not find any defunct processes belonging to 847249
[2026-01-09 20:31:30] 2026-01-10 01:30:55,833 | INFO     | ready for new job
[2026-01-09 20:31:30] 2026-01-10 01:30:55,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:31:30] 2026-01-10 01:30:55,866 | INFO     | ***************************************
[2026-01-09 20:31:30] 2026-01-10 01:30:55,867 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:31:30] 2026-01-10 01:30:55,867 | INFO     | ***************************************
[2026-01-09 20:31:30] 2026-01-10 01:30:55,867 | INFO     | 
[2026-01-09 20:31:30] 2026-01-10 01:30:55,900 | INFO     | architecture information:
[2026-01-09 20:31:30] 2026-01-10 01:30:55,917 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:31:30] 2026-01-10 01:30:56,107 | INFO     | cat /etc/os-release:
[2026-01-09 20:31:30] NAME="CentOS Linux"
[2026-01-09 20:31:30] VERSION="7 (Core)"
[2026-01-09 20:31:30] ID="centos"
[2026-01-09 20:31:30] ID_LIKE="rhel fedora"
[2026-01-09 20:31:30] VERSION_ID="7"
[2026-01-09 20:31:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:31:30] ANSI_COLOR="0;31"
[2026-01-09 20:31:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:31:30] HOME_URL="https://www.centos.org/"
[2026-01-09 20:31:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:31:30] 
[2026-01-09 20:31:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:31:30] 
[2026-01-09 20:31:30] 2026-01-10 01:30:56,108 | INFO     | ***************************************
[2026-01-09 20:31:30] 2026-01-10 01:30:56,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:31:30] 2026-01-10 01:30:56,635 | INFO     | sufficient remaining disk space (84555071488 B)
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | INFO     | update_server=False
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:31:30] 2026-01-10 01:30:56,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:31:30] 2026-01-10 01:30:56,938 | INFO     | all job control threads have been joined
[2026-01-09 20:31:30] 2026-01-10 01:30:57,269 | INFO     | all data control threads have been joined
[2026-01-09 20:31:30] 2026-01-10 01:30:57,386 | INFO     | all payload control threads have been joined
[2026-01-09 20:31:30] 2026-01-10 01:30:57,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:31:30] 2026-01-10 01:30:57,519 | INFO     | aborting loop
[2026-01-09 20:31:30] 2026-01-10 01:30:57,662 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,664 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,900 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,944 | INFO     | [job] control thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,990 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,994 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:57,998 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,267 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,295 | INFO     | [data] control thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,399 | INFO     | [payload] control thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,407 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,530 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:58,668 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:30:59,066 | INFO     | [job] validate thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:31:00,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:31:30] 2026-01-10 01:31:04,099 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:31:30] 2026-01-10 01:31:18,411 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:31:30] 2026-01-10 01:31:19,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818740287296)>', '<ExcThread(monitor, started 139818029807360)>']
[2026-01-09 20:31:30] 2026-01-10 01:31:24,477 | INFO     | all workflow threads have been joined
[2026-01-09 20:31:30] 2026-01-10 01:31:24,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:31:30] 2026-01-10 01:31:24,477 | INFO     | traces error code: 0
[2026-01-09 20:31:30] 2026-01-10 01:31:24,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:31:30] 2026-01-10 01:31:26,567 [wrapper] supervise_pilot (15 min periods counter: 30)
[2026-01-09 20:31:30] 2026-01-10 01:31:28,983 | INFO     | PID=839763 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | INFO     | .. there are 11 such processes running
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:31:30] 2026-01-10 01:31:29,013 | INFO     | [monitor] control thread has ended
[2026-01-09 20:31:30] 2026-01-10 01:31:30,117 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:31:30] 2026-01-10 01:31:30,153 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:31:30] 2026-01-10 01:31:30,207 [wrapper] pilotpid: 839763
[2026-01-09 20:31:30] 2026-01-10 01:31:30,235 [wrapper] Pilot exit status: 0
[2026-01-09 20:31:30] 2026-01-10 01:31:30,292 [wrapper] pandaids: 6963187018
[2026-01-09 20:31:30] 2026-01-10 01:31:30,391 [wrapper] cleanup supervisor_pilot 1575129 839764
[2026-01-09 20:31:30] 2026-01-10 01:31:30,409 [wrapper] Test setup, not cleaning
[2026-01-09 20:31:30] 2026-01-10 01:31:30,423 [wrapper] apfmon messages muted
[2026-01-09 20:31:30] 2026-01-10 01:31:30,431 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:31:30] 2026-01-10 01:31:30,455 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:31:30]  *** Error codes and diagnostics ***
[2026-01-09 20:31:30]     "exeErrorCode": 0,
[2026-01-09 20:31:30]     "exeErrorDiag": "",
[2026-01-09 20:31:30]     "pilotErrorCode": 0,
[2026-01-09 20:31:30]     "pilotErrorDiag": "",
[2026-01-09 20:31:30]  *** Listing of results directory ***
[2026-01-09 20:31:30] total 447240
[2026-01-09 20:31:30] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:31:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:15 run_atlas
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:15 job.xml
[2026-01-09 20:31:30] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 13:15 EVNT.47898824._001416.pool.root.1
[2026-01-09 20:31:30] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:15 start_atlas.sh
[2026-01-09 20:31:30] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:15 shared
[2026-01-09 20:31:30] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:15 input.tar.gz
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:15 boinc_lockfile
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 13:15 pandaJob.out
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas        57 Jan  9 13:15 setup.sh.local
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas    989356 Jan  9 13:16 agis_schedconf.cvmfs.json
[2026-01-09 20:31:30] drwx------. 5 boincer umatlas      4096 Jan  9 13:16 pilot3
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas 219016957 Jan  9 20:28 HITS.47898826._036926.pool.root.1
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:28 boinc_task_state.xml
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas      6909 Jan  9 20:29 init_data.xml
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas      1041 Jan  9 20:30 memory_monitor_summary.json
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas    613575 Jan  9 20:30 log.47898826._036926.job.log.tgz.1
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas        95 Jan  9 20:30 pilot_heartbeat.json
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas      7773 Jan  9 20:30 heartbeat.json
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:31 boinc_mmap_file
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:31 wrapper_checkpoint.txt
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas       822 Jan  9 20:31 pilotlog.txt
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas   3323427 Jan  9 20:31 log.47898826._036926.job.log.1
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas       357 Jan  9 20:31 output.list
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:31 runtime_log
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas   3952640 Jan  9 20:31 result.tar.gz
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 20:31 runtime_log.err
[2026-01-09 20:31:30] -rw-------. 1 boincer umatlas       657 Jan  9 20:31 6e7KDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo3lKDma3eLXo.diag
[2026-01-09 20:31:30] -rw-r--r--. 1 boincer umatlas     21303 Jan  9 20:31 stderr.txt
[2026-01-09 20:31:31] HITS file was successfully produced:
[2026-01-09 20:31:31] -rw-------. 1 boincer umatlas 219016957 Jan  9 20:28 shared/HITS.pool.root.1
[2026-01-09 20:31:31]  *** Contents of shared directory: ***
[2026-01-09 20:31:31] total 440200
[2026-01-09 20:31:31] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 13:15 ATLAS.root_0
[2026-01-09 20:31:31] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:15 start_atlas.sh
[2026-01-09 20:31:31] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:15 input.tar.gz
[2026-01-09 20:31:31] -rw-------. 1 boincer umatlas 219016957 Jan  9 20:28 HITS.pool.root.1
[2026-01-09 20:31:31] -rw-------. 1 boincer umatlas   3952640 Jan  9 20:31 result.tar.gz
20:31:32 (833374): run_atlas exited; CPU time 46047.313460
20:31:32 (833374): called boinc_finish(0)

</stderr_txt>
]]>

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