Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:16:58 (906066): wrapper (7.7.26015): starting
01:16:58 (906066): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 01:16:58] Arguments: --nthreads 12
[2026-01-11 01:16:58] Threads: 12
[2026-01-11 01:16:58] Checking for CVMFS
[2026-01-11 01:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 01:16:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 01:16:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 01:16:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 01:16:59] 2.13.3.0 40677 2605 59564 154999 2 97 3177959 4096001 10670 130560 0 14282200 99.963 310315 271 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-11 01:16:59] CVMFS is ok
[2026-01-11 01:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:16:59] Checking for apptainer binary...
[2026-01-11 01:16:59] apptainer is not installed, using version from CVMFS
[2026-01-11 01:16:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:17:02] epyc7v12
[2026-01-11 01:17:02] apptainer works
[2026-01-11 01:17:02] Set ATHENA_PROC_NUMBER=12
[2026-01-11 01:17:02] Set ATHENA_CORE_NUMBER=12
[2026-01-11 01:17:02] Starting ATLAS job with PandaID=6963168765
[2026-01-11 01:17:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:15:59]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:15:59] 2026-01-11 04:15:03,361 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:15:59] 2026-01-11 04:15:03,364 | INFO     | sum of square deviations: 1605458027.9075196
[2026-01-11 04:15:59] 2026-01-11 04:15:03,365 | INFO     | sum of deviations: 7797346506.040466
[2026-01-11 04:15:59] 2026-01-11 04:15:03,366 | INFO     | mean x: 1768099571.0231214
[2026-01-11 04:15:59] 2026-01-11 04:15:03,366 | INFO     | mean y: 2694785.7398843933
[2026-01-11 04:15:59] 2026-01-11 04:15:03,366 | INFO     | intersect: -8584564907.630895
[2026-01-11 04:15:59] 2026-01-11 04:15:03,367 | INFO     | chi2: 2.4058631264825205
[2026-01-11 04:15:59] 2026-01-11 04:15:03,367 | INFO     | sum of square deviations: 1470238107.9047577
[2026-01-11 04:15:59] 2026-01-11 04:15:03,370 | INFO     | sum of deviations: 8016099234.571439
[2026-01-11 04:15:59] 2026-01-11 04:15:03,370 | INFO     | mean x: 1768099418.5238094
[2026-01-11 04:15:59] 2026-01-11 04:15:03,370 | INFO     | mean y: 2695032.7321428573
[2026-01-11 04:15:59] 2026-01-11 04:15:03,370 | INFO     | intersect: -9637417217.978924
[2026-01-11 04:15:59] 2026-01-11 04:15:03,371 | INFO     | chi2: 2.4080116167310135
[2026-01-11 04:15:59] 2026-01-11 04:15:03,371 | INFO     | current chi2=2.4080116167310135 (change=-0.08930226432432756 %)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,371 | INFO     | right removable region: 167
[2026-01-11 04:15:59] 2026-01-11 04:15:03,371 | INFO     | sum of square deviations: 1470235667.9047577
[2026-01-11 04:15:59] 2026-01-11 04:15:03,372 | INFO     | sum of deviations: -29907004011.761898
[2026-01-11 04:15:59] 2026-01-11 04:15:03,373 | INFO     | mean x: 1768099723.5238094
[2026-01-11 04:15:59] 2026-01-11 04:15:03,373 | INFO     | mean y: 2736964.9404761903
[2026-01-11 04:15:59] 2026-01-11 04:15:03,373 | INFO     | intersect: 35968784231.348625
[2026-01-11 04:15:59] 2026-01-11 04:15:03,374 | INFO     | chi2: 0.4269191165413678
[2026-01-11 04:15:59] 2026-01-11 04:15:03,374 | INFO     | current chi2=0.4269191165413678 (change=82.25505383735015 %)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,374 | INFO     | sum of square deviations: 1342827407.9018447
[2026-01-11 04:15:59] 2026-01-11 04:15:03,380 | INFO     | sum of deviations: -39512715097.773
[2026-01-11 04:15:59] 2026-01-11 04:15:03,380 | INFO     | mean x: 1768099876.02454
[2026-01-11 04:15:59] 2026-01-11 04:15:03,380 | INFO     | mean y: 2748410.693251534
[2026-01-11 04:15:59] 2026-01-11 04:15:03,380 | INFO     | intersect: 52029111779.99981
[2026-01-11 04:15:59] 2026-01-11 04:15:03,381 | INFO     | chi2: 0.25450065931269256
[2026-01-11 04:15:59] 2026-01-11 04:15:03,381 | INFO     | current chi2=0.25450065931269256 (change=40.38667994666108 %)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,381 | INFO     | sum of square deviations: 1223000685.398728
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | sum of deviations: -42898005441.65189
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | mean x: 1768100028.5253165
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | mean y: 2752627.5379746836
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | intersect: 62020677515.56501
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | chi2: 0.18108172104026718
[2026-01-11 04:15:59] 2026-01-11 04:15:03,382 | INFO     | current chi2=0.18108172104026718 (change=28.848231069696013 %)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,383 | INFO     | sum of square deviations: 1110532818.9411745
[2026-01-11 04:15:59] 2026-01-11 04:15:03,384 | INFO     | sum of deviations: -38527965411.03924
[2026-01-11 04:15:59] 2026-01-11 04:15:03,384 | INFO     | mean x: 1768100181.0196078
[2026-01-11 04:15:59] 2026-01-11 04:15:03,384 | INFO     | mean y: 2746691.0130718956
[2026-01-11 04:15:59] 2026-01-11 04:15:03,384 | INFO     | intersect: 61343844815.89801
[2026-01-11 04:15:59] 2026-01-11 04:15:03,385 | INFO     | chi2: 0.18061376917208874
[2026-01-11 04:15:59] 2026-01-11 04:15:03,385 | INFO     | current chi2=0.18061376917208874 (change=0.2584202676505275 %)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,385 | INFO     | left removable region: 40
[2026-01-11 04:15:59] 2026-01-11 04:15:03,385 | INFO     | sum of square deviations: 635129073.9685051
[2026-01-11 04:15:59] 2026-01-11 04:15:03,386 | INFO     | sum of deviations: -16228648927.409452
[2026-01-11 04:15:59] 2026-01-11 04:15:03,386 | INFO     | mean x: 1768100608.015748
[2026-01-11 04:15:59] 2026-01-11 04:15:03,386 | INFO     | mean y: 2712865.2047244096
[2026-01-11 04:15:59] 2026-01-11 04:15:03,386 | INFO     | intersect: 45180748656.47705
[2026-01-11 04:15:59] 2026-01-11 04:15:03,386 | INFO     | chi2: 0.14042082616887497
[2026-01-11 04:15:59] 2026-01-11 04:15:03,387 | INFO     | current memory leak: -25.55 B/s (using 127 data points, chi2=0.14)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,388 | INFO     | could have reported an average CPU frequency of 2503 MHz (9 samples)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,388 | INFO     | ..............................
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . Timing measurements:
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . get job = 0 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . initial setup = 3 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . payload setup = 18 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . stage-in = 0 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . payload execution = 10566 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . stage-out = 1 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | . log creation = 0 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,389 | INFO     | ..............................
[2026-01-11 04:15:59] 2026-01-11 04:15:03,714 | INFO     | 
[2026-01-11 04:15:59] 2026-01-11 04:15:03,714 | INFO     | job summary report
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | --------------------------------------------------
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | PanDA job id: 6963168765
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | task id: 47898826
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | errors: (none)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | pilot state: finished 
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | transexitcode: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | exeerrorcode: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | exeerrordiag: 
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | exitcode: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | exitmsg: OK
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | cpuconsumptiontime: 62306 s
[2026-01-11 04:15:59] 2026-01-11 04:15:03,715 | INFO     | nevents: 400
[2026-01-11 04:15:59] 2026-01-11 04:15:03,716 | INFO     | neventsw: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:03,716 | INFO     | pid: 919903
[2026-01-11 04:15:59] 2026-01-11 04:15:03,716 | INFO     | pgrp: 919903
[2026-01-11 04:15:59] 2026-01-11 04:15:03,716 | INFO     | corecount: 12
[2026-01-11 04:15:59] 2026-01-11 04:15:03,724 | INFO     | event service: False
[2026-01-11 04:15:59] 2026-01-11 04:15:03,724 | INFO     | sizes: {0: 2283823, 1: 2284022, 12: 2284022, 14: 2284312, 23: 2284340, 10589: 2313477, 10590: 2313604, 10593: 2322704, 10596: 2322760, 10612: 2323018}
[2026-01-11 04:15:59] 2026-01-11 04:15:03,724 | INFO     | --------------------------------------------------
[2026-01-11 04:15:59] 2026-01-11 04:15:03,725 | INFO     | 
[2026-01-11 04:15:59] 2026-01-11 04:15:03,725 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 04:15:59] 2026-01-11 04:15:03,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:15:59] 2026-01-11 04:15:03,815 | INFO     | job 6963168765 has completed (purged errors)
[2026-01-11 04:15:59] 2026-01-11 04:15:03,816 | INFO     | overall cleanup function is called
[2026-01-11 04:15:59] 2026-01-11 04:15:04,170 | INFO     | PID=912570 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:15:59] 2026-01-11 04:15:04,170 | INFO     | .. there are 12 such processes running
[2026-01-11 04:15:59] 2026-01-11 04:15:04,831 | INFO     | --- collectZombieJob: --- 10, [919903]
[2026-01-11 04:15:59] 2026-01-11 04:15:04,831 | INFO     | zombie collector waiting for pid 919903
[2026-01-11 04:15:59] 2026-01-11 04:15:04,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:15:59] 2026-01-11 04:15:04,832 | INFO     | collected zombie processes
[2026-01-11 04:15:59] 2026-01-11 04:15:04,832 | INFO     | will attempt to kill all subprocesses of pid=919903
[2026-01-11 04:15:59] 2026-01-11 04:15:05,988 | INFO     | process IDs to be killed: [919903] (in reverse order)
[2026-01-11 04:15:59] 2026-01-11 04:15:06,578 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:15:59] 2026-01-11 04:15:06,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:15:59] 2026-01-11 04:15:06,615 | INFO     | did not find any defunct processes belonging to 919903
[2026-01-11 04:15:59] 2026-01-11 04:15:06,653 | INFO     | did not find any defunct processes belonging to 919903
[2026-01-11 04:15:59] 2026-01-11 04:15:06,654 | INFO     | ready for new job
[2026-01-11 04:15:59] 2026-01-11 04:15:06,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:15:59] 2026-01-11 04:15:06,657 | INFO     | ***************************************
[2026-01-11 04:15:59] 2026-01-11 04:15:06,660 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:15:59] 2026-01-11 04:15:06,660 | INFO     | ***************************************
[2026-01-11 04:15:59] 2026-01-11 04:15:06,660 | INFO     | 
[2026-01-11 04:15:59] 2026-01-11 04:15:06,679 | INFO     | architecture information:
[2026-01-11 04:15:59] 2026-01-11 04:15:06,686 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:15:59] 2026-01-11 04:15:06,754 | INFO     | cat /etc/os-release:
[2026-01-11 04:15:59] NAME="CentOS Linux"
[2026-01-11 04:15:59] VERSION="7 (Core)"
[2026-01-11 04:15:59] ID="centos"
[2026-01-11 04:15:59] ID_LIKE="rhel fedora"
[2026-01-11 04:15:59] VERSION_ID="7"
[2026-01-11 04:15:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:15:59] ANSI_COLOR="0;31"
[2026-01-11 04:15:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:15:59] HOME_URL="https://www.centos.org/"
[2026-01-11 04:15:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:15:59] 
[2026-01-11 04:15:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:15:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:15:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:15:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:15:59] 
[2026-01-11 04:15:59] 2026-01-11 04:15:06,755 | INFO     | ***************************************
[2026-01-11 04:15:59] 2026-01-11 04:15:07,259 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 04:15:59] 2026-01-11 04:15:07,335 | INFO     | sufficient remaining disk space (365864943616 B)
[2026-01-11 04:15:59] 2026-01-11 04:15:07,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:15:59] 2026-01-11 04:15:07,335 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:15:59] 2026-01-11 04:15:07,336 | INFO     | update_server=False
[2026-01-11 04:15:59] 2026-01-11 04:15:07,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:15:59] 2026-01-11 04:15:07,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:15:59] 2026-01-11 04:15:07,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:15:59] 2026-01-11 04:15:07,337 | INFO     | aborting loop
[2026-01-11 04:15:59] 2026-01-11 04:15:07,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:15:59] 2026-01-11 04:15:07,754 | INFO     | all payload control threads have been joined
[2026-01-11 04:15:59] 2026-01-11 04:15:08,088 | INFO     | all data control threads have been joined
[2026-01-11 04:15:59] 2026-01-11 04:15:08,129 | INFO     | all job control threads have been joined
[2026-01-11 04:15:59] 2026-01-11 04:15:08,341 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:08,343 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:08,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:15:59] 2026-01-11 04:15:08,615 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:08,616 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:08,759 | INFO     | [payload] control thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:08,879 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,093 | INFO     | [data] control thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,135 | INFO     | [job] control thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,246 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,342 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,514 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,576 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,629 | INFO     | [job] validate thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:09,633 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:11,346 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:17,736 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:15:59] 2026-01-11 04:15:18,741 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:15:59] 2026-01-11 04:15:37,520 | INFO     | PID=912570 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 04:15:59] 2026-01-11 04:15:37,520 | INFO     | .. there are 12 such processes running
[2026-01-11 04:15:59] 2026-01-11 04:15:37,521 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:15:59] 2026-01-11 04:15:37,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:15:59] 2026-01-11 04:15:37,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:15:59] 2026-01-11 04:15:51,506 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:15:59] 2026-01-11 04:15:53,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136257785591616)>', '<ExcThread(monitor, started 136257384453888)>']
[2026-01-11 04:15:59] 2026-01-11 04:15:53,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:15:59] 2026-01-11 04:15:53,609 | INFO     | [monitor] control thread has ended
[2026-01-11 04:15:59] 2026-01-11 04:15:58,508 | INFO     | all workflow threads have been joined
[2026-01-11 04:15:59] 2026-01-11 04:15:58,508 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:15:59] 2026-01-11 04:15:58,509 | INFO     | traces error code: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:58,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:15:59] 2026-01-11 04:15:58,776 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:15:59] 2026-01-11 04:15:58,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:15:59] 2026-01-11 04:15:58,796 [wrapper] pilotpid: 912570
[2026-01-11 04:15:59] 2026-01-11 04:15:58,805 [wrapper] Pilot exit status: 0
[2026-01-11 04:15:59] 2026-01-11 04:15:58,842 [wrapper] pandaids: 6963168765
[2026-01-11 04:15:59] 2026-01-11 04:15:59,037 [wrapper] cleanup supervisor_pilot 1139461 912571
[2026-01-11 04:15:59] 2026-01-11 04:15:59,045 [wrapper] Test setup, not cleaning
[2026-01-11 04:15:59] 2026-01-11 04:15:59,052 [wrapper] apfmon messages muted
[2026-01-11 04:15:59] 2026-01-11 04:15:59,061 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:15:59] 2026-01-11 04:15:59,068 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:15:59]  *** Error codes and diagnostics ***
[2026-01-11 04:15:59]     "exeErrorCode": 0,
[2026-01-11 04:15:59]     "exeErrorDiag": "",
[2026-01-11 04:15:59]     "pilotErrorCode": 0,
[2026-01-11 04:15:59]     "pilotErrorDiag": "",
[2026-01-11 04:15:59]  *** Listing of results directory ***
[2026-01-11 04:15:59] total 442988
[2026-01-11 04:15:59] -rw-r--r-- 1 boinc boinc    579449 Jan  9 00:57 pilot3.tar.gz
[2026-01-11 04:15:59] -rwx------ 1 boinc boinc     36322 Jan  9 00:59 runpilot2-wrapper.sh
[2026-01-11 04:15:59] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:03 queuedata.json
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc       100 Jan 11 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:15:59] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 01:16 run_atlas
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc       105 Jan 11 01:16 job.xml
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc 224979892 Jan 11 01:16 EVNT.47898824._001390.pool.root.1
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:16 start_atlas.sh
[2026-01-11 04:15:59] drwxrwx--x 2 boinc boinc      4096 Jan 11 01:16 shared
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc    592398 Jan 11 01:16 input.tar.gz
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc      7052 Jan 11 01:16 init_data.xml
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc         0 Jan 11 01:16 boinc_setup_complete
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc         0 Jan 11 01:16 boinc_lockfile
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc      2520 Jan 11 01:17 pandaJob.out
[2026-01-11 04:15:59] -rw------- 1 boinc boinc    989545 Jan 11 01:17 agis_schedconf.cvmfs.json
[2026-01-11 04:15:59] -rw------- 1 boinc boinc   1516240 Jan 11 01:17 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:15:59] drwx------ 5 boinc boinc      4096 Jan 11 01:17 pilot3
[2026-01-11 04:15:59] -rw------- 1 boinc boinc 220854269 Jan 11 04:13 HITS.47898826._036292.pool.root.1
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc       531 Jan 11 04:13 boinc_task_state.xml
[2026-01-11 04:15:59] -rw------- 1 boinc boinc      1020 Jan 11 04:14 memory_monitor_summary.json
[2026-01-11 04:15:59] -rw------- 1 boinc boinc    478809 Jan 11 04:14 log.47898826._036292.job.log.tgz.1
[2026-01-11 04:15:59] -rw------- 1 boinc boinc      7740 Jan 11 04:15 heartbeat.json
[2026-01-11 04:15:59] -rw------- 1 boinc boinc        95 Jan 11 04:15 pilot_heartbeat.json
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc        28 Jan 11 04:15 wrapper_checkpoint.txt
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc      8192 Jan 11 04:15 boinc_mmap_file
[2026-01-11 04:15:59] -rw------- 1 boinc boinc      4919 Jan 11 04:15 pilotlog.txt
[2026-01-11 04:15:59] -rw------- 1 boinc boinc   1454887 Jan 11 04:15 log.47898826._036292.job.log.1
[2026-01-11 04:15:59] -rw------- 1 boinc boinc       357 Jan 11 04:15 output.list
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc       620 Jan 11 04:15 runtime_log
[2026-01-11 04:15:59] -rw------- 1 boinc boinc   1955840 Jan 11 04:15 result.tar.gz
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc      9168 Jan 11 04:15 runtime_log.err
[2026-01-11 04:15:59] -rw------- 1 boinc boinc       655 Jan 11 04:15 PRFLDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm60lKDmVZNywn.diag
[2026-01-11 04:15:59] -rw-rw-r-- 1 boinc boinc     20918 Jan 11 04:15 stderr.txt
[2026-01-11 04:15:59] HITS file was successfully produced:
[2026-01-11 04:15:59] -rw------- 1 boinc boinc 220854269 Jan 11 04:13 shared/HITS.pool.root.1
[2026-01-11 04:15:59]  *** Contents of shared directory: ***
[2026-01-11 04:15:59] total 437904
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc 224979892 Jan 11 01:16 ATLAS.root_0
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:16 start_atlas.sh
[2026-01-11 04:15:59] -rw-r--r-- 2 boinc boinc    592398 Jan 11 01:16 input.tar.gz
[2026-01-11 04:15:59] -rw------- 1 boinc boinc 220854269 Jan 11 04:13 HITS.pool.root.1
[2026-01-11 04:15:59] -rw------- 1 boinc boinc   1955840 Jan 11 04:15 result.tar.gz
04:16:01 (906066): run_atlas exited; CPU time 62854.473095
04:16:01 (906066): called boinc_finish(0)

</stderr_txt>
]]>

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