Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:26:27 (12707): wrapper (7.7.26015): starting
00:26:27 (12707): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:26:27] Arguments: --nthreads 8
[2026-01-10 00:26:27] Threads: 8
[2026-01-10 00:26:27] Checking for CVMFS
[2026-01-10 00:26:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:26:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:26:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:26:31] 2.11.2.0 15502 36056 99848 154961 1 60 24376274 25165824 96 130560 0 17070785 99.870 9416458 3651 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 00:26:31] CVMFS is ok
[2026-01-10 00:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:26:31] Checking for apptainer binary...
[2026-01-10 00:26:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:26:31] Running /usr/bin/apptainer --version
[2026-01-10 00:26:31] apptainer version 1.3.2-1.el7
[2026-01-10 00:26:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:26:46] cg-vwn488.simple-grid.lan
[2026-01-10 00:26:46] apptainer works
[2026-01-10 00:26:46] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:26:46] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:26:46] Starting ATLAS job with PandaID=6963162722
[2026-01-10 00:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:27:53]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:27:53] 2026-01-10 05:27:07,373 | INFO     | extracted standard info from prmon json
[2026-01-10 06:27:53] 2026-01-10 05:27:07,373 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:27:53] 2026-01-10 05:27:07,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:27:53] 2026-01-10 05:27:07,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:27:53] 2026-01-10 05:27:07,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:27:53] 2026-01-10 05:27:07,384 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:27:53] 2026-01-10 05:27:07,385 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,388 | INFO     | sum of deviations: 182376881248.50006
[2026-01-10 06:27:53] 2026-01-10 05:27:07,388 | INFO     | mean x: 1768012347.5
[2026-01-10 06:27:53] 2026-01-10 05:27:07,388 | INFO     | mean y: 2451726.7088235295
[2026-01-10 06:27:53] 2026-01-10 05:27:07,389 | INFO     | intersect: -26454734866.61347
[2026-01-10 06:27:53] 2026-01-10 05:27:07,392 | INFO     | chi2: 9.025811021703959
[2026-01-10 06:27:53] 2026-01-10 05:27:07,393 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,396 | INFO     | sum of deviations: 201919010493.00003
[2026-01-10 06:27:53] 2026-01-10 05:27:07,396 | INFO     | mean x: 1768012195.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,396 | INFO     | mean y: 2457274.5134328357
[2026-01-10 06:27:53] 2026-01-10 05:27:07,397 | INFO     | intersect: -30620948595.60533
[2026-01-10 06:27:53] 2026-01-10 05:27:07,405 | INFO     | chi2: 8.318210714050483
[2026-01-10 06:27:53] 2026-01-10 05:27:07,406 | INFO     | current chi2=8.318210714050483 (change=7.839742112392349 %)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,406 | INFO     | right removable region: 334
[2026-01-10 06:27:53] 2026-01-10 05:27:07,406 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,410 | INFO     | sum of deviations: 62241882103.00003
[2026-01-10 06:27:53] 2026-01-10 05:27:07,410 | INFO     | mean x: 1768012500.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,410 | INFO     | mean y: 2486291.1343283583
[2026-01-10 06:27:53] 2026-01-10 05:27:07,410 | INFO     | intersect: -9437232841.407179
[2026-01-10 06:27:53] 2026-01-10 05:27:07,410 | INFO     | chi2: 4.023611678746466
[2026-01-10 06:27:53] 2026-01-10 05:27:07,411 | INFO     | current chi2=4.023611678746466 (change=55.42105114907603 %)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,411 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 06:27:53] 2026-01-10 05:27:07,414 | INFO     | sum of deviations: -31643830581.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,414 | INFO     | mean x: 1768012652.5
[2026-01-10 06:27:53] 2026-01-10 05:27:07,414 | INFO     | mean y: 2514110.878787879
[2026-01-10 06:27:53] 2026-01-10 05:27:07,415 | INFO     | intersect: 5023143497.194921
[2026-01-10 06:27:53] 2026-01-10 05:27:07,415 | INFO     | chi2: 1.1442189637879332
[2026-01-10 06:27:53] 2026-01-10 05:27:07,415 | INFO     | current chi2=1.1442189637879332 (change=71.56239082832147 %)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,416 | INFO     | sum of square deviations: 10644478650.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,419 | INFO     | sum of deviations: -50882244516.00001
[2026-01-10 06:27:53] 2026-01-10 05:27:07,419 | INFO     | mean x: 1768012805.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,419 | INFO     | mean y: 2519953.224615385
[2026-01-10 06:27:53] 2026-01-10 05:27:07,419 | INFO     | intersect: 8453892989.839146
[2026-01-10 06:27:53] 2026-01-10 05:27:07,420 | INFO     | chi2: 0.9342587884661149
[2026-01-10 06:27:53] 2026-01-10 05:27:07,420 | INFO     | current chi2=0.9342587884661149 (change=18.349650020372486 %)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,420 | INFO     | left removable region: 30
[2026-01-10 06:27:53] 2026-01-10 05:27:07,430 | INFO     | sum of square deviations: 8711530780.0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,434 | INFO     | sum of deviations: 1004069577.0000012
[2026-01-10 06:27:53] 2026-01-10 05:27:07,434 | INFO     | mean x: 1768013079.5
[2026-01-10 06:27:53] 2026-01-10 05:27:07,434 | INFO     | mean y: 2516770.263157895
[2026-01-10 06:27:53] 2026-01-10 05:27:07,434 | INFO     | intersect: -201260061.8108986
[2026-01-10 06:27:53] 2026-01-10 05:27:07,434 | INFO     | chi2: 0.06594178770615743
[2026-01-10 06:27:53] 2026-01-10 05:27:07,435 | INFO     | current memory leak: 0.12 B/s (using 304 data points, chi2=0.07)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,435 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,435 | INFO     | ..............................
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . Timing measurements:
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . get job = 0 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . initial setup = 10 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . payload setup = 146 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . stage-in = 0 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . payload execution = 20875 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . stage-out = 3 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | . log creation = 1 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,436 | INFO     | ..............................
[2026-01-10 06:27:53] 2026-01-10 05:27:07,762 | INFO     | 
[2026-01-10 06:27:53] 2026-01-10 05:27:07,762 | INFO     | job summary report
[2026-01-10 06:27:53] 2026-01-10 05:27:07,762 | INFO     | --------------------------------------------------
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | PanDA job id: 6963162722
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | task id: 47898826
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | errors: (none)
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | pilot state: finished 
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | transexitcode: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | exeerrorcode: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | exeerrordiag: 
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | exitcode: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,763 | INFO     | exitmsg: OK
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | cpuconsumptiontime: 78689 s
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | nevents: 400
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | neventsw: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | pid: 22938
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | pgrp: 22938
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | corecount: 8
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | event service: False
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 12: 2284027, 23: 2284055, 34: 2284083, 45: 2284239, 55: 2284267, 66: 2284295, 77: 2284323, 88: 2284379, 98: 2284687, 10
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | --------------------------------------------------
[2026-01-10 06:27:53] 2026-01-10 05:27:07,764 | INFO     | 
[2026-01-10 06:27:53] 2026-01-10 05:27:07,765 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 06:27:53] 2026-01-10 05:27:08,060 | INFO     | time since job start (21362s) is within the limit (349056.0s)
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | job 6963162722 has completed (purged errors)
[2026-01-10 06:27:53] 2026-01-10 05:27:08,321 | INFO     | overall cleanup function is called
[2026-01-10 06:27:53] 2026-01-10 05:27:09,173 | INFO     | PID=16469 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:27:53] 2026-01-10 05:27:09,174 | INFO     | .. there are 2 such processes running
[2026-01-10 06:27:53] 2026-01-10 05:27:09,330 | INFO     | --- collectZombieJob: --- 10, [22938]
[2026-01-10 06:27:53] 2026-01-10 05:27:09,330 | INFO     | zombie collector waiting for pid 22938
[2026-01-10 06:27:53] 2026-01-10 05:27:09,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:27:53] 2026-01-10 05:27:09,331 | INFO     | collected zombie processes
[2026-01-10 06:27:53] 2026-01-10 05:27:09,331 | INFO     | will attempt to kill all subprocesses of pid=22938
[2026-01-10 06:27:53] 2026-01-10 05:27:09,408 | INFO     | process IDs to be killed: [22938] (in reverse order)
[2026-01-10 06:27:53] 2026-01-10 05:27:10,385 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:27:53] 2026-01-10 05:27:10,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:27:53] 2026-01-10 05:27:10,387 | INFO     | did not find any defunct processes belonging to 22938
[2026-01-10 06:27:53] 2026-01-10 05:27:10,392 | INFO     | did not find any defunct processes belonging to 22938
[2026-01-10 06:27:53] 2026-01-10 05:27:10,392 | INFO     | ready for new job
[2026-01-10 06:27:53] 2026-01-10 05:27:10,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:27:53] 2026-01-10 05:27:10,395 | INFO     | ***************************************
[2026-01-10 06:27:53] 2026-01-10 05:27:10,395 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:27:53] 2026-01-10 05:27:10,395 | INFO     | ***************************************
[2026-01-10 06:27:53] 2026-01-10 05:27:10,395 | INFO     | 
[2026-01-10 06:27:53] 2026-01-10 05:27:10,396 | INFO     | pilot is running in a VM
[2026-01-10 06:27:53] 2026-01-10 05:27:10,396 | INFO     | architecture information:
[2026-01-10 06:27:53] 2026-01-10 05:27:10,410 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:27:53] 2026-01-10 05:27:10,713 | INFO     | cat /etc/os-release:
[2026-01-10 06:27:53] NAME="CentOS Linux"
[2026-01-10 06:27:53] VERSION="7 (Core)"
[2026-01-10 06:27:53] ID="centos"
[2026-01-10 06:27:53] ID_LIKE="rhel fedora"
[2026-01-10 06:27:53] VERSION_ID="7"
[2026-01-10 06:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:27:53] ANSI_COLOR="0;31"
[2026-01-10 06:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:27:53] HOME_URL="https://www.centos.org/"
[2026-01-10 06:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:27:53] 
[2026-01-10 06:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:27:53] 
[2026-01-10 06:27:53] 2026-01-10 05:27:10,713 | INFO     | ***************************************
[2026-01-10 06:27:53] 2026-01-10 05:27:11,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 06:27:53] 2026-01-10 05:27:11,478 | INFO     | sufficient remaining disk space (497329111040 B)
[2026-01-10 06:27:53] 2026-01-10 05:27:11,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:27:53] 2026-01-10 05:27:11,478 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:27:53] 2026-01-10 05:27:11,479 | INFO     | update_server=False
[2026-01-10 06:27:53] 2026-01-10 05:27:11,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:27:53] 2026-01-10 05:27:11,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:27:53] 2026-01-10 05:27:11,482 | INFO     | aborting loop
[2026-01-10 06:27:53] 2026-01-10 05:27:11,755 | INFO     | all data control threads have been joined
[2026-01-10 06:27:53] 2026-01-10 05:27:12,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:27:53] 2026-01-10 05:27:12,349 | INFO     | all payload control threads have been joined
[2026-01-10 06:27:53] 2026-01-10 05:27:12,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:27:53] 2026-01-10 05:27:12,484 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:12,488 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:12,495 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:12,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:27:53] 2026-01-10 05:27:12,684 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:12,761 | INFO     | [data] control thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,142 | INFO     | all job control threads have been joined
[2026-01-10 06:27:53] 2026-01-10 05:27:13,355 | INFO     | [payload] control thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,589 | INFO     | [job] validate thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,596 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,638 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,659 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,787 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:13,875 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:14,148 | INFO     | [job] control thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:14,477 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:16,077 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:22,260 | INFO     | job.realtimelogging is not enabled
[2026-01-10 06:27:53] 2026-01-10 05:27:23,266 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:27:53] 2026-01-10 05:27:41,296 | INFO     | PID=16469 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:27:53] 2026-01-10 05:27:41,296 | INFO     | .. there are 2 such processes running
[2026-01-10 06:27:53] 2026-01-10 05:27:41,296 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:27:53] 2026-01-10 05:27:41,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:27:53] 2026-01-10 05:27:41,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:27:53] 2026-01-10 05:27:42,909 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:27:53] 2026-01-10 05:27:43,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501378836288)>', '<ExcThread(monitor, started 140500719888128)>']
[2026-01-10 06:27:53] 2026-01-10 05:27:44,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:27:53] 2026-01-10 05:27:44,313 | INFO     | [monitor] control thread has ended
[2026-01-10 06:27:53] 2026-01-10 05:27:48,490 | INFO     | all workflow threads have been joined
[2026-01-10 06:27:53] 2026-01-10 05:27:48,490 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:27:53] 2026-01-10 05:27:48,491 | INFO     | traces error code: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:48,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:27:53] 2026-01-10 05:27:48,953 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:27:53] 2026-01-10 05:27:49,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:27:53] 2026-01-10 05:27:49,151 [wrapper] pilotpid: 16469
[2026-01-10 06:27:53] 2026-01-10 05:27:49,282 [wrapper] Pilot exit status: 0
[2026-01-10 06:27:53] 2026-01-10 05:27:49,720 [wrapper] pandaids: 6963162722
[2026-01-10 06:27:53] 2026-01-10 05:27:50,750 [wrapper] cleanup supervisor_pilot 22238 16470
[2026-01-10 06:27:53] 2026-01-10 05:27:50,866 [wrapper] Test setup, not cleaning
[2026-01-10 06:27:53] 2026-01-10 05:27:50,985 [wrapper] apfmon messages muted
[2026-01-10 06:27:53] 2026-01-10 05:27:51,105 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:27:53] 2026-01-10 05:27:51,195 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:27:53]  *** Error codes and diagnostics ***
[2026-01-10 06:27:53]     "exeErrorCode": 0,
[2026-01-10 06:27:53]     "exeErrorDiag": "",
[2026-01-10 06:27:53]     "pilotErrorCode": 0,
[2026-01-10 06:27:53]     "pilotErrorDiag": "",
[2026-01-10 06:27:53]  *** Listing of results directory ***
[2026-01-10 06:27:53] total 448080
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 06:27:53] -rwx------. 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc       100 Jan 10 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:27:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 00:26 run_atlas
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc       105 Jan 10 00:26 job.xml
[2026-01-10 06:27:53] -rw-r--r--. 2 boinc boinc 224003722 Jan 10 00:26 EVNT.47898824._001307.pool.root.1
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc      6389 Jan 10 00:26 init_data.xml
[2026-01-10 06:27:53] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:26 start_atlas.sh
[2026-01-10 06:27:53] drwxrwx--x. 2 boinc boinc        68 Jan 10 00:26 shared
[2026-01-10 06:27:53] -rw-r--r--. 2 boinc boinc    592399 Jan 10 00:26 input.tar.gz
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc         0 Jan 10 00:26 boinc_lockfile
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc      2520 Jan 10 00:26 pandaJob.out
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc    989374 Jan 10 00:30 agis_schedconf.cvmfs.json
[2026-01-10 06:27:53] drwx------. 5 boinc boinc      4096 Jan 10 00:31 pilot3
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc 224165789 Jan 10 06:23 HITS.47898826._034278.pool.root.1
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc       531 Jan 10 06:24 boinc_task_state.xml
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc      1012 Jan 10 06:25 memory_monitor_summary.json
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc   1516240 Jan 10 06:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc    538105 Jan 10 06:25 log.47898826._034278.job.log.tgz.1
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc        95 Jan 10 06:27 pilot_heartbeat.json
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc      7776 Jan 10 06:27 heartbeat.json
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:27 boinc_mmap_file
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc      4956 Jan 10 06:27 pilotlog.txt
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:27 wrapper_checkpoint.txt
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc   2846833 Jan 10 06:27 log.47898826._034278.job.log.1
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc       357 Jan 10 06:27 output.list
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:27 runtime_log
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc   3399680 Jan 10 06:27 result.tar.gz
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc      8817 Jan 10 06:27 runtime_log.err
[2026-01-10 06:27:53] -rw-------. 1 boinc boinc       657 Jan 10 06:27 gzELDmA1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCxlKDmZ5IZTn.diag
[2026-01-10 06:27:53] -rw-r--r--. 1 boinc boinc     20810 Jan 10 06:27 stderr.txt
[2026-01-10 06:27:54] HITS file was successfully produced:
[2026-01-10 06:27:54] -rw-------. 1 boinc boinc 224165789 Jan 10 06:23 shared/HITS.pool.root.1
[2026-01-10 06:27:54]  *** Contents of shared directory: ***
[2026-01-10 06:27:54] total 441584
[2026-01-10 06:27:54] -rw-r--r--. 2 boinc boinc 224003722 Jan 10 00:26 ATLAS.root_0
[2026-01-10 06:27:54] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:26 start_atlas.sh
[2026-01-10 06:27:54] -rw-r--r--. 2 boinc boinc    592399 Jan 10 00:26 input.tar.gz
[2026-01-10 06:27:54] -rw-------. 1 boinc boinc 224165789 Jan 10 06:23 HITS.pool.root.1
[2026-01-10 06:27:54] -rw-------. 1 boinc boinc   3399680 Jan 10 06:27 result.tar.gz
06:27:55 (12707): run_atlas exited; CPU time 78892.906461
06:27:55 (12707): called boinc_finish(0)

</stderr_txt>
]]>

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