Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:18:03 (3019581): wrapper (7.7.26015): starting
04:18:03 (3019581): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 04:18:03] Arguments: --nthreads 3
[2026-01-12 04:18:03] Threads: 3
[2026-01-12 04:18:03] Checking for CVMFS
[2026-01-12 04:18:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:18:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:18:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:18:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:18:04] 2.12.7.0 2907148 6458 56344 155038 0 56 4263847 6144000 2751 130560 1 9902855 99.975 352136 1392 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-01-12 04:18:04] CVMFS is ok
[2026-01-12 04:18:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:18:04] Checking for apptainer binary...
[2026-01-12 04:18:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:18:04] Running /usr/bin/apptainer --version
[2026-01-12 04:18:04] apptainer version 1.4.5
[2026-01-12 04:18:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:18:04] Ryzen3
[2026-01-12 04:18:04] apptainer works
[2026-01-12 04:18:04] Set ATHENA_PROC_NUMBER=3
[2026-01-12 04:18:04] Set ATHENA_CORE_NUMBER=3
[2026-01-12 04:18:04] Starting ATLAS job with PandaID=6963167204
[2026-01-12 04:18:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 08:04:38]  *** The last 200 lines of the pilot log: ***
[2026-01-12 08:04:38] 2026-01-12 07:03:47,201 | INFO     | log transfer has been attempted: DONE
[2026-01-12 08:04:38] 2026-01-12 07:03:47,201 | INFO     | job 6963167204 has finished - writing final server update
[2026-01-12 08:04:38] 2026-01-12 07:03:47,202 | INFO     | total number of processed events: 400 (read)
[2026-01-12 08:04:38] 2026-01-12 07:03:47,202 | INFO     | executing command: lscpu
[2026-01-12 08:04:38] 2026-01-12 07:03:47,225 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 08:04:38] 2026-01-12 07:03:47,306 | INFO     | number of running child processes to parent process 3029740: 1
[2026-01-12 08:04:38] 2026-01-12 07:03:47,306 | INFO     | maximum number of monitored processes: 6
[2026-01-12 08:04:38] 2026-01-12 07:03:48,545 | INFO     | time since job start (13538s) is within the limit (349056.0s)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,647 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 08:04:38] 2026-01-12 07:03:49,649 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3966.6638333333326
[2026-01-12 08:04:38] 2026-01-12 07:03:49,650 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6963167204/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,651 | INFO     | extracted standard info from prmon json
[2026-01-12 08:04:38] 2026-01-12 07:03:49,651 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 08:04:38] 2026-01-12 07:03:49,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 08:04:38] 2026-01-12 07:03:49,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 08:04:38] 2026-01-12 07:03:49,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 08:04:38] 2026-01-12 07:03:49,654 | INFO     | fitting pss+swap vs Time
[2026-01-12 08:04:38] 2026-01-12 07:03:49,654 | INFO     | sum of square deviations: 3392567795.5
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | sum of deviations: -55654727471.50001
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | mean x: 1768194652.5
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | mean y: 2357423.40990991
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | intersect: 29009409731.09935
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | chi2: 1.3620195368637544
[2026-01-12 08:04:38] 2026-01-12 07:03:49,655 | INFO     | sum of square deviations: 3168461268.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,656 | INFO     | sum of deviations: -54051648294.999985
[2026-01-12 08:04:38] 2026-01-12 07:03:49,656 | INFO     | mean x: 1768194500.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | mean y: 2358514.4470046083
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | intersect: 30166472621.31806
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | chi2: 1.3556272402036165
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | current chi2=1.3556272402036165 (change=0.46932488757519186 %)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | right removable region: 216
[2026-01-12 08:04:38] 2026-01-12 07:03:49,657 | INFO     | sum of square deviations: 3168461268.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,658 | INFO     | sum of deviations: -70326798252.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,658 | INFO     | mean x: 1768194805.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,658 | INFO     | mean y: 2367177.5529953917
[2026-01-12 08:04:38] 2026-01-12 07:03:49,658 | INFO     | intersect: 39249013673.55475
[2026-01-12 08:04:38] 2026-01-12 07:03:49,658 | INFO     | chi2: 0.3138829737113383
[2026-01-12 08:04:38] 2026-01-12 07:03:49,659 | INFO     | current chi2=0.3138829737113383 (change=76.95459094264544 %)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,659 | INFO     | sum of square deviations: 2954447953.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | sum of deviations: -60448719881.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | mean x: 1768194957.5
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | mean y: 2360135.320754717
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | intersect: 36180056741.00342
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | chi2: 0.292878226249688
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | current chi2=0.292878226249688 (change=6.691904060067695 %)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | left removable region: 20
[2026-01-12 08:04:38] 2026-01-12 07:03:49,660 | INFO     | sum of square deviations: 2334722845.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,661 | INFO     | sum of deviations: -37557431051.0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,661 | INFO     | mean x: 1768195079.5
[2026-01-12 08:04:38] 2026-01-12 07:03:49,661 | INFO     | mean y: 2344569.663265306
[2026-01-12 08:04:38] 2026-01-12 07:03:49,661 | INFO     | intersect: 28446348073.23061
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | chi2: 0.20297518788672642
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | current memory leak: -16.09 B/s (using 196 data points, chi2=0.20)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | could have reported an average CPU frequency of 3952 MHz (11 samples)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | ..............................
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . Timing measurements:
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . get job = 0 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . initial setup = 1 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . payload setup = 3 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . stage-in = 0 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . payload execution = 13511 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . stage-out = 0 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | . log creation = 0 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,662 | INFO     | ..............................
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | 
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | job summary report
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | --------------------------------------------------
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | PanDA job id: 6963167204
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | task id: 47898826
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | errors: (none)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | pilot state: finished 
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | transexitcode: 0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | exeerrorcode: 0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,723 | INFO     | exeerrordiag: 
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | exitcode: 0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | exitmsg: OK
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | cpuconsumptiontime: 39331 s
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | nevents: 400
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | neventsw: 0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | pid: 3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | pgrp: 3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | corecount: 3
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | event service: False
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | sizes: {0: 2283972, 3: 2284234, 11: 2284262, 13518: 2314692, 13519: 2314691, 13520: 2323931, 13525: 2324097}
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | --------------------------------------------------
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | 
[2026-01-12 08:04:38] 2026-01-12 07:03:49,724 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2026-01-12 08:04:38] 2026-01-12 07:03:49,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,740 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 08:04:38] 2026-01-12 07:03:49,740 | INFO     | job 6963167204 has completed (purged errors)
[2026-01-12 08:04:38] 2026-01-12 07:03:49,740 | INFO     | overall cleanup function is called
[2026-01-12 08:04:38] 2026-01-12 07:03:50,747 | INFO     | --- collectZombieJob: --- 10, [3029740]
[2026-01-12 08:04:38] 2026-01-12 07:03:50,747 | INFO     | zombie collector waiting for pid 3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:50,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 08:04:38] 2026-01-12 07:03:50,747 | INFO     | collected zombie processes
[2026-01-12 08:04:38] 2026-01-12 07:03:50,747 | INFO     | will attempt to kill all subprocesses of pid=3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:50,827 | INFO     | process IDs to be killed: [3029740] (in reverse order)
[2026-01-12 08:04:38] 2026-01-12 07:03:50,862 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 08:04:38] 2026-01-12 07:03:50,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 08:04:38] 2026-01-12 07:03:50,864 | INFO     | did not find any defunct processes belonging to 3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:50,866 | INFO     | did not find any defunct processes belonging to 3029740
[2026-01-12 08:04:38] 2026-01-12 07:03:50,866 | INFO     | ready for new job
[2026-01-12 08:04:38] 2026-01-12 07:03:50,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 08:04:38] 2026-01-12 07:03:50,867 | INFO     | ***************************************
[2026-01-12 08:04:38] 2026-01-12 07:03:50,867 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 08:04:38] 2026-01-12 07:03:50,867 | INFO     | ***************************************
[2026-01-12 08:04:38] 2026-01-12 07:03:50,867 | INFO     | 
[2026-01-12 08:04:38] 2026-01-12 07:03:50,868 | INFO     | architecture information:
[2026-01-12 08:04:38] 2026-01-12 07:03:50,868 | INFO     | executing command: cat /etc/os-release
[2026-01-12 08:04:38] 2026-01-12 07:03:50,879 | INFO     | cat /etc/os-release:
[2026-01-12 08:04:38] NAME="CentOS Linux"
[2026-01-12 08:04:38] VERSION="7 (Core)"
[2026-01-12 08:04:38] ID="centos"
[2026-01-12 08:04:38] ID_LIKE="rhel fedora"
[2026-01-12 08:04:38] VERSION_ID="7"
[2026-01-12 08:04:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 08:04:38] ANSI_COLOR="0;31"
[2026-01-12 08:04:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 08:04:38] HOME_URL="https://www.centos.org/"
[2026-01-12 08:04:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 08:04:38] 
[2026-01-12 08:04:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 08:04:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 08:04:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 08:04:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 08:04:38] 
[2026-01-12 08:04:38] 2026-01-12 07:03:50,880 | INFO     | ***************************************
[2026-01-12 08:04:38] 2026-01-12 07:03:51,381 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2026-01-12 08:04:38] 2026-01-12 07:03:51,395 | INFO     | sufficient remaining disk space (238894972928 B)
[2026-01-12 08:04:38] 2026-01-12 07:03:51,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | INFO     | update_server=False
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | INFO     | aborting loop
[2026-01-12 08:04:38] 2026-01-12 07:03:51,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 08:04:38] 2026-01-12 07:03:52,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 08:04:38] 2026-01-12 07:03:52,218 | INFO     | all data control threads have been joined
[2026-01-12 08:04:38] 2026-01-12 07:03:52,400 | INFO     | [job] retrieve thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:52,401 | INFO     | [job] queue monitor thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:52,401 | INFO     | [job] job monitor thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:52,525 | INFO     | [payload] validate_post thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:52,731 | INFO     | all job control threads have been joined
[2026-01-12 08:04:38] 2026-01-12 07:03:52,884 | INFO     | all payload control threads have been joined
[2026-01-12 08:04:38] 2026-01-12 07:03:52,889 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,076 | INFO     | [job] validate thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,195 | INFO     | [data] copytool_in thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,221 | INFO     | [data] control thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,258 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,681 | INFO     | [payload] failed_post thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,736 | INFO     | [job] control thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:53,888 | INFO     | [payload] control thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:54,215 | INFO     | [data] copytool_out thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:03:54,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 08:04:38] 2026-01-12 07:03:58,765 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:04:01,455 | INFO     | job.realtimelogging is not enabled
[2026-01-12 08:04:38] 2026-01-12 07:04:02,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 08:04:38] 2026-01-12 07:04:21,691 | INFO     | PID=3023297 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 08:04:38] 2026-01-12 07:04:21,691 | INFO     | .. there are 4 such processes running
[2026-01-12 08:04:38] 2026-01-12 07:04:21,691 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 08:04:38] 2026-01-12 07:04:21,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 08:04:38] 2026-01-12 07:04:21,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 08:04:38] 2026-01-12 07:04:32,958 | INFO     | [monitor] cgroup control has ended
[2026-01-12 08:04:38] 2026-01-12 07:04:33,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410371585856)>', '<ExcThread(monitor, started 140409510549248)>']
[2026-01-12 08:04:38] 2026-01-12 07:04:33,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 08:04:38] 2026-01-12 07:04:33,730 | INFO     | [monitor] control thread has ended
[2026-01-12 08:04:38] 2026-01-12 07:04:38,291 | INFO     | all workflow threads have been joined
[2026-01-12 08:04:38] 2026-01-12 07:04:38,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 08:04:38] 2026-01-12 07:04:38,292 | INFO     | traces error code: 0
[2026-01-12 08:04:38] 2026-01-12 07:04:38,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 08:04:38] 2026-01-12 07:04:38,367 [wrapper] ==== pilot stdout END ====
[2026-01-12 08:04:38] 2026-01-12 07:04:38,369 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 08:04:38] 2026-01-12 07:04:38,371 [wrapper] pilotpid: 3023297
[2026-01-12 08:04:38] 2026-01-12 07:04:38,372 [wrapper] Pilot exit status: 0
[2026-01-12 08:04:38] 2026-01-12 07:04:38,379 [wrapper] pandaids: 6963167204
[2026-01-12 08:04:38] 2026-01-12 07:04:38,403 [wrapper] cleanup supervisor_pilot 3184421 3023298
[2026-01-12 08:04:38] 2026-01-12 07:04:38,405 [wrapper] Test setup, not cleaning
[2026-01-12 08:04:38] 2026-01-12 07:04:38,407 [wrapper] apfmon messages muted
[2026-01-12 08:04:38] 2026-01-12 07:04:38,409 [wrapper] ==== wrapper stdout END ====
[2026-01-12 08:04:38] 2026-01-12 07:04:38,411 [wrapper] ==== wrapper stderr END ====
[2026-01-12 08:04:38]  *** Error codes and diagnostics ***
[2026-01-12 08:04:38]     "exeErrorCode": 0,
[2026-01-12 08:04:38]     "exeErrorDiag": "",
[2026-01-12 08:04:38]     "pilotErrorCode": 0,
[2026-01-12 08:04:38]     "pilotErrorDiag": "",
[2026-01-12 08:04:38]  *** Listing of results directory ***
[2026-01-12 08:04:38] insgesamt 449408
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc    579449  9. Jan 01:57 pilot3.tar.gz
[2026-01-12 08:04:38] -rwx------ 1 boinc boinc     36322  9. Jan 01:59 runpilot2-wrapper.sh
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc      5112  9. Jan 02:02 queuedata.json
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc       100 12. Jan 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 08:04:38] -rwxr-xr-x 1 boinc boinc      7986 12. Jan 04:17 run_atlas
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc       105 12. Jan 04:17 job.xml
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc      6917 12. Jan 04:18 init_data.xml
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc 226709512 12. Jan 04:18 EVNT.47898824._001379.pool.root.1
[2026-01-12 08:04:38] drwxrwx--x 2 boinc boinc      4096 12. Jan 04:18 shared
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc    592404 12. Jan 04:18 input.tar.gz
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc     15847 12. Jan 04:18 start_atlas.sh
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc         0 12. Jan 04:18 boinc_lockfile
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc      2520 12. Jan 04:18 pandaJob.out
[2026-01-12 08:04:38] -rw------- 1 boinc boinc        52 12. Jan 04:18 setup.sh.local
[2026-01-12 08:04:38] -rw------- 1 boinc boinc    990058 12. Jan 04:18 agis_schedconf.cvmfs.json
[2026-01-12 08:04:38] drwx------ 5 boinc boinc      4096 12. Jan 04:18 pilot3
[2026-01-12 08:04:38] -rw------- 1 boinc boinc 224944691 12. Jan 08:03 HITS.47898826._035579.pool.root.1
[2026-01-12 08:04:38] -rw------- 1 boinc boinc      1022 12. Jan 08:03 memory_monitor_summary.json
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc       530 12. Jan 08:03 boinc_task_state.xml
[2026-01-12 08:04:38] -rw------- 1 boinc boinc   1516240 12. Jan 08:03 agis_ddmendpoints.agis.ALL.json
[2026-01-12 08:04:38] -rw------- 1 boinc boinc    366606 12. Jan 08:03 log.47898826._035579.job.log.tgz.1
[2026-01-12 08:04:38] -rw------- 1 boinc boinc      7745 12. Jan 08:03 heartbeat.json
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc      8192 12. Jan 08:04 boinc_mmap_file
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc        28 12. Jan 08:04 wrapper_checkpoint.txt
[2026-01-12 08:04:38] -rw------- 1 boinc boinc        95 12. Jan 08:04 pilot_heartbeat.json
[2026-01-12 08:04:38] -rw------- 1 boinc boinc      4897 12. Jan 08:04 pilotlog.txt
[2026-01-12 08:04:38] -rw------- 1 boinc boinc   1942321 12. Jan 08:04 log.47898826._035579.job.log.1
[2026-01-12 08:04:38] -rw------- 1 boinc boinc       357 12. Jan 08:04 output.list
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc       620 12. Jan 08:04 runtime_log
[2026-01-12 08:04:38] -rw------- 1 boinc boinc   2324480 12. Jan 08:04 result.tar.gz
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc      9291 12. Jan 08:04 runtime_log.err
[2026-01-12 08:04:38] -rw------- 1 boinc boinc       650 12. Jan 08:04 EhaNDmM1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOlgKDmia1K6m.diag
[2026-01-12 08:04:38] -rw-r--r-- 1 boinc boinc     20928 12. Jan 08:04 stderr.txt
[2026-01-12 08:04:38] HITS file was successfully produced:
[2026-01-12 08:04:38] -rw------- 1 boinc boinc 224944691 12. Jan 08:03 shared/HITS.pool.root.1
[2026-01-12 08:04:38]  *** Contents of shared directory: ***
[2026-01-12 08:04:38] insgesamt 443952
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc 226709512 12. Jan 04:18 ATLAS.root_0
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc    592404 12. Jan 04:18 input.tar.gz
[2026-01-12 08:04:38] -rw-r--r-- 2 boinc boinc     15847 12. Jan 04:18 start_atlas.sh
[2026-01-12 08:04:38] -rw------- 1 boinc boinc 224944691 12. Jan 08:03 HITS.pool.root.1
[2026-01-12 08:04:38] -rw------- 1 boinc boinc   2324480 12. Jan 08:04 result.tar.gz
08:04:39 (3019581): run_atlas exited; CPU time 39447.102742
08:04:39 (3019581): called boinc_finish(0)

</stderr_txt>
]]>

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