Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:29 (2363048): wrapper (7.7.26015): starting
13:37:29 (2363048): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 13:37:29] Arguments: --nthreads 10
[2026-01-09 13:37:29] Threads: 10
[2026-01-09 13:37:29] Checking for CVMFS
[2026-01-09 13:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:37:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:37:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:37:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:37:32] 2.13.3.0 9597 23027 129192 154952 0 407 20480061 40960000 31163 16776704 0 109985234 99.654 97568107 46932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:37:32] CVMFS is ok
[2026-01-09 13:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:37:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:37:32] Further information can be found at the LHC@home message board.
[2026-01-09 13:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:37:32] Checking for apptainer binary...
[2026-01-09 13:37:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:37:32] Running /usr/bin/apptainer --version
[2026-01-09 13:37:32] apptainer version 1.4.5-2.el9
[2026-01-09 13:37:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:37:33] c-208-38.aglt2.org
[2026-01-09 13:37:33] apptainer works
[2026-01-09 13:37:33] Set ATHENA_PROC_NUMBER=10
[2026-01-09 13:37:33] Set ATHENA_CORE_NUMBER=10
[2026-01-09 13:37:33] Starting ATLAS job with PandaID=6963167190
[2026-01-09 13:37:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:29:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:29:13] 2026-01-09 21:28:24,301 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 16:29:13] 2026-01-09 21:28:24,357 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9883203125014
[2026-01-09 16:29:13] 2026-01-09 21:28:24,550 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963167190/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,550 | INFO     | extracted standard info from prmon json
[2026-01-09 16:29:13] 2026-01-09 21:28:24,550 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:29:13] 2026-01-09 21:28:24,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:29:13] 2026-01-09 21:28:24,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:29:13] 2026-01-09 21:28:24,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:29:13] 2026-01-09 21:28:24,581 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:29:13] 2026-01-09 21:28:24,581 | INFO     | sum of square deviations: 1367736702.609755
[2026-01-09 16:29:13] 2026-01-09 21:28:24,581 | INFO     | sum of deviations: 57453764532.57318
[2026-01-09 16:29:13] 2026-01-09 21:28:24,581 | INFO     | mean x: 1767989038.5487804
[2026-01-09 16:29:13] 2026-01-09 21:28:24,582 | INFO     | mean y: 2502817.6158536584
[2026-01-09 16:29:13] 2026-01-09 21:28:24,582 | INFO     | intersect: -74264441780.07867
[2026-01-09 16:29:13] 2026-01-09 21:28:24,582 | INFO     | chi2: 4.611438187896733
[2026-01-09 16:29:13] 2026-01-09 21:28:24,582 | INFO     | sum of square deviations: 1246415937.5974824
[2026-01-09 16:29:13] 2026-01-09 21:28:24,582 | INFO     | sum of deviations: 66294447469.45283
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | mean x: 1767988886.0503144
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | mean y: 2513591.9433962265
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | intersect: -94033387905.56305
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | chi2: 3.916368492895483
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | current chi2=3.916368492895483 (change=15.072731470749046 %)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | right removable region: 158
[2026-01-09 16:29:13] 2026-01-09 21:28:24,645 | INFO     | sum of square deviations: 1246411057.5974824
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | sum of deviations: 7796471319.308186
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | mean x: 1767989191.0503144
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | mean y: 2565049.8364779875
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | intersect: -11056448697.554478
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | chi2: 1.1459916063745386
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | current chi2=1.1459916063745386 (change=75.14893272596976 %)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | sum of square deviations: 1132480900.0844216
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | sum of deviations: -8623030317.850647
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | mean x: 1767989343.551948
[2026-01-09 16:29:13] 2026-01-09 21:28:24,646 | INFO     | mean y: 2586990.6688311687
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | intersect: 13464558587.672215
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | chi2: 0.7927476103604446
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | current chi2=0.7927476103604446 (change=30.824309187710142 %)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | sum of square deviations: 1025713667.5704689
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | sum of deviations: -11576061494.879194
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | mean x: 1767989496.0536914
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | mean y: 2591113.234899329
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | intersect: 19955874154.783062
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | chi2: 0.7579862522782834
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | current chi2=0.7579862522782834 (change=4.384921206682159 %)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,647 | INFO     | left removable region: 30
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | sum of square deviations: 650267817.5
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | sum of deviations: 1800520532.75
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | mean x: 1767989770.5625
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | mean y: 2600438.90625
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | intersect: -4892770049.868927
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | chi2: 0.0003974974536369565
[2026-01-09 16:29:13] 2026-01-09 21:28:24,648 | INFO     | current memory leak: 2.77 B/s (using 128 data points, chi2=0.00)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | could have reported an average CPU frequency of 3796 MHz (9 samples)
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | ..............................
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . Timing measurements:
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . get job = 0 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . initial setup = 8 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . payload setup = 47 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . stage-in = 0 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . payload execution = 10023 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . stage-out = 2 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | . log creation = 0 s
[2026-01-09 16:29:13] 2026-01-09 21:28:24,705 | INFO     | ..............................
[2026-01-09 16:29:13] 2026-01-09 21:28:25,261 | INFO     | 
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | job summary report
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | --------------------------------------------------
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | PanDA job id: 6963167190
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | task id: 47898826
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | errors: (none)
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | pilot state: finished 
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | transexitcode: 0
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | exeerrorcode: 0
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | exeerrordiag: 
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | exitcode: 0
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | exitmsg: OK
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | cpuconsumptiontime: 30236 s
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | nevents: 400
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | neventsw: 0
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | pid: 2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | pgrp: 2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | corecount: 10
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | event service: False
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 22: 2284027, 31: 2284317, 33: 2284345, 10074: 2313146, 10075: 2313145, 10078: 2322199, 10080: 2322255, 10115: 2322513}
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | --------------------------------------------------
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | 
[2026-01-09 16:29:13] 2026-01-09 21:28:25,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | job 6963167190 has completed (purged errors)
[2026-01-09 16:29:13] 2026-01-09 21:28:25,493 | INFO     | overall cleanup function is called
[2026-01-09 16:29:13] 2026-01-09 21:28:26,503 | INFO     | --- collectZombieJob: --- 10, [2381416]
[2026-01-09 16:29:13] 2026-01-09 21:28:26,503 | INFO     | zombie collector waiting for pid 2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:26,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:29:13] 2026-01-09 21:28:26,503 | INFO     | collected zombie processes
[2026-01-09 16:29:13] 2026-01-09 21:28:26,503 | INFO     | will attempt to kill all subprocesses of pid=2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:29,716 | INFO     | PID=2368818 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:29:13] 2026-01-09 21:28:29,716 | INFO     | .. there are 27 such processes running
[2026-01-09 16:29:13] 2026-01-09 21:28:29,851 | INFO     | process IDs to be killed: [2381416] (in reverse order)
[2026-01-09 16:29:13] 2026-01-09 21:28:30,237 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:29:13] 2026-01-09 21:28:30,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:29:13] 2026-01-09 21:28:30,357 | INFO     | did not find any defunct processes belonging to 2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:30,476 | INFO     | did not find any defunct processes belonging to 2381416
[2026-01-09 16:29:13] 2026-01-09 21:28:30,477 | INFO     | ready for new job
[2026-01-09 16:29:13] 2026-01-09 21:28:30,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:29:13] 2026-01-09 21:28:30,478 | INFO     | ***************************************
[2026-01-09 16:29:13] 2026-01-09 21:28:30,478 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:29:13] 2026-01-09 21:28:30,478 | INFO     | ***************************************
[2026-01-09 16:29:13] 2026-01-09 21:28:30,478 | INFO     | 
[2026-01-09 16:29:13] 2026-01-09 21:28:30,499 | INFO     | architecture information:
[2026-01-09 16:29:13] 2026-01-09 21:28:30,518 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:29:13] 2026-01-09 21:28:30,587 | INFO     | cat /etc/os-release:
[2026-01-09 16:29:13] NAME="CentOS Linux"
[2026-01-09 16:29:13] VERSION="7 (Core)"
[2026-01-09 16:29:13] ID="centos"
[2026-01-09 16:29:13] ID_LIKE="rhel fedora"
[2026-01-09 16:29:13] VERSION_ID="7"
[2026-01-09 16:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:29:13] ANSI_COLOR="0;31"
[2026-01-09 16:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:29:13] HOME_URL="https://www.centos.org/"
[2026-01-09 16:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:29:13] 
[2026-01-09 16:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:29:13] 
[2026-01-09 16:29:13] 2026-01-09 21:28:30,587 | INFO     | ***************************************
[2026-01-09 16:29:13] 2026-01-09 21:28:31,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 16:29:13] 2026-01-09 21:28:31,194 | INFO     | sufficient remaining disk space (169080782848 B)
[2026-01-09 16:29:13] 2026-01-09 21:28:31,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:29:13] 2026-01-09 21:28:31,194 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:29:13] 2026-01-09 21:28:31,194 | INFO     | update_server=False
[2026-01-09 16:29:13] 2026-01-09 21:28:31,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:29:13] 2026-01-09 21:28:31,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:29:13] 2026-01-09 21:28:31,561 | INFO     | all payload control threads have been joined
[2026-01-09 16:29:13] 2026-01-09 21:28:31,996 | INFO     | all data control threads have been joined
[2026-01-09 16:29:13] 2026-01-09 21:28:32,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:29:13] 2026-01-09 21:28:32,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:29:13] 2026-01-09 21:28:32,195 | INFO     | aborting loop
[2026-01-09 16:29:13] 2026-01-09 21:28:32,200 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,201 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,235 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,272 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,406 | INFO     | all job control threads have been joined
[2026-01-09 16:29:13] 2026-01-09 21:28:32,456 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:29:13] 2026-01-09 21:28:32,483 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,567 | INFO     | [payload] control thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:32,924 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,003 | INFO     | [data] control thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,201 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,224 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,415 | INFO     | [job] control thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,697 | INFO     | [job] validate thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:33,767 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:34,171 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:28:36,517 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:29:13] 2026-01-09 21:29:04,122 | INFO     | PID=2368818 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:29:13] 2026-01-09 21:29:04,122 | INFO     | .. there are 27 such processes running
[2026-01-09 16:29:13] 2026-01-09 21:29:04,123 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:29:13] 2026-01-09 21:29:04,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:29:13] 2026-01-09 21:29:04,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:29:13] 2026-01-09 21:29:05,668 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:29:13] 2026-01-09 21:29:05,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056160806720)>', '<ExcThread(monitor, started 140055762941696)>']
[2026-01-09 16:29:13] 2026-01-09 21:29:06,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:29:13] 2026-01-09 21:29:06,143 | INFO     | [monitor] control thread has ended
[2026-01-09 16:29:13] 2026-01-09 21:29:10,797 | INFO     | all workflow threads have been joined
[2026-01-09 16:29:13] 2026-01-09 21:29:10,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:29:13] 2026-01-09 21:29:10,798 | INFO     | traces error code: 0
[2026-01-09 16:29:13] 2026-01-09 21:29:10,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:29:13] 2026-01-09 21:29:12,141 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:29:13] 2026-01-09 21:29:12,152 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:29:13] 2026-01-09 21:29:12,196 [wrapper] pilotpid: 2368818
[2026-01-09 16:29:13] 2026-01-09 21:29:12,238 [wrapper] Pilot exit status: 0
[2026-01-09 16:29:13] 2026-01-09 21:29:12,329 [wrapper] pandaids: 6963167190
[2026-01-09 16:29:13] 2026-01-09 21:29:13,056 [wrapper] cleanup supervisor_pilot 3120988 2368819
[2026-01-09 16:29:13] 2026-01-09 21:29:13,074 [wrapper] Test setup, not cleaning
[2026-01-09 16:29:13] 2026-01-09 21:29:13,093 [wrapper] apfmon messages muted
[2026-01-09 16:29:13] 2026-01-09 21:29:13,107 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:29:13] 2026-01-09 21:29:13,122 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:29:13]  *** Error codes and diagnostics ***
[2026-01-09 16:29:13]     "exeErrorCode": 0,
[2026-01-09 16:29:13]     "exeErrorDiag": "",
[2026-01-09 16:29:13]     "pilotErrorCode": 0,
[2026-01-09 16:29:13]     "pilotErrorDiag": "",
[2026-01-09 16:29:13]  *** Listing of results directory ***
[2026-01-09 16:29:13] total 436948
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 16:29:13] -rwx------. 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:29:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:37 run_atlas
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:37 job.xml
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas 222919912 Jan  9 13:37 EVNT.47898824._001378.pool.root.1
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 16:29:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:37 shared
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:37 input.tar.gz
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:37 boinc_lockfile
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 13:37 pandaJob.out
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas        57 Jan  9 13:37 setup.sh.local
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas    989372 Jan  9 13:38 agis_schedconf.cvmfs.json
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:29:13] drwx------. 5 boincer umatlas      4096 Jan  9 13:38 pilot3
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas      7185 Jan  9 16:22 init_data.xml
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas 217073576 Jan  9 16:26 HITS.47898826._035565.pool.root.1
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:26 boinc_task_state.xml
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas      1048 Jan  9 16:27 memory_monitor_summary.json
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas    435293 Jan  9 16:27 log.47898826._035565.job.log.tgz.1
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas      7801 Jan  9 16:28 heartbeat.json
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas        95 Jan  9 16:29 pilot_heartbeat.json
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:29 boinc_mmap_file
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas        27 Jan  9 16:29 wrapper_checkpoint.txt
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas      4825 Jan  9 16:29 pilotlog.txt
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas   1325510 Jan  9 16:29 log.47898826._035565.job.log.1
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas       357 Jan  9 16:29 output.list
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:29 runtime_log
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas   1781760 Jan  9 16:29 result.tar.gz
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 16:29 runtime_log.err
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas       659 Jan  9 16:29 1xXNDmM1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMlgKDm5kNAon.diag
[2026-01-09 16:29:13] -rw-r--r--. 1 boincer umatlas     21300 Jan  9 16:29 stderr.txt
[2026-01-09 16:29:13] HITS file was successfully produced:
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas 217073576 Jan  9 16:26 shared/HITS.pool.root.1
[2026-01-09 16:29:13]  *** Contents of shared directory: ***
[2026-01-09 16:29:13] total 432028
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas 222919912 Jan  9 13:37 ATLAS.root_0
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 16:29:13] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:37 input.tar.gz
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas 217073576 Jan  9 16:26 HITS.pool.root.1
[2026-01-09 16:29:13] -rw-------. 1 boincer umatlas   1781760 Jan  9 16:29 result.tar.gz
16:29:15 (2363048): run_atlas exited; CPU time 30526.995461
16:29:15 (2363048): called boinc_finish(0)

</stderr_txt>
]]>

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