Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:28 (2384294): wrapper (7.7.26015): starting
13:00:28 (2384294): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:00:28] Arguments: --nthreads 8
[2026-01-09 13:00:28] Threads: 8
[2026-01-09 13:00:28] Checking for CVMFS
[2026-01-09 13:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:00:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:00:30] 2.13.3.0 13122 93744 388024 154951 0 755 25128304 32935936 21459 16776704 0 355426209 99.520 460360063 35983 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:00:30] CVMFS is ok
[2026-01-09 13:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:00:30] Further information can be found at the LHC@home message board.
[2026-01-09 13:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:00:30] Checking for apptainer binary...
[2026-01-09 13:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:00:30] Running /usr/bin/apptainer --version
[2026-01-09 13:00:30] apptainer version 1.4.5-2.el9
[2026-01-09 13:00:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:00:31] c6-8-25-2.aglt2.org
[2026-01-09 13:00:31] apptainer works
[2026-01-09 13:00:31] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:00:31] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:00:31] Starting ATLAS job with PandaID=6963186914
[2026-01-09 13:00:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:28:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:28:45] 2026-01-10 01:27:19,603 | INFO     | extracted standard info from prmon json
[2026-01-09 20:28:45] 2026-01-10 01:27:19,603 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:28:45] 2026-01-10 01:27:19,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:28:45] 2026-01-10 01:27:19,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:28:45] 2026-01-10 01:27:19,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:28:45] 2026-01-10 01:27:19,624 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:28:45] 2026-01-10 01:27:19,625 | INFO     | sum of square deviations: 25699848134.559658
[2026-01-09 20:28:45] 2026-01-10 01:27:19,634 | INFO     | sum of deviations: 177195787185.27542
[2026-01-09 20:28:45] 2026-01-10 01:27:19,634 | INFO     | mean x: 1767995093.6009173
[2026-01-09 20:28:45] 2026-01-10 01:27:19,634 | INFO     | mean y: 2487952.8119266056
[2026-01-09 20:28:45] 2026-01-10 01:27:19,634 | INFO     | intersect: -12187517245.274706
[2026-01-09 20:28:45] 2026-01-10 01:27:19,635 | INFO     | chi2: 3.9974974899155113
[2026-01-09 20:28:45] 2026-01-10 01:27:19,635 | INFO     | sum of square deviations: 24825726977.907223
[2026-01-09 20:28:45] 2026-01-10 01:27:19,645 | INFO     | sum of deviations: 201968048701.3479
[2026-01-09 20:28:45] 2026-01-10 01:27:19,645 | INFO     | mean x: 1767994941.0974479
[2026-01-09 20:28:45] 2026-01-10 01:27:19,645 | INFO     | mean y: 2492230.134570766
[2026-01-09 20:28:45] 2026-01-10 01:27:19,645 | INFO     | intersect: -14380912883.644188
[2026-01-09 20:28:45] 2026-01-10 01:27:19,646 | INFO     | chi2: 3.320009125085227
[2026-01-09 20:28:45] 2026-01-10 01:27:19,646 | INFO     | current chi2=3.320009125085227 (change=16.947812138453738 %)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,646 | INFO     | right removable region: 430
[2026-01-09 20:28:45] 2026-01-10 01:27:19,647 | INFO     | sum of square deviations: 24825753209.508118
[2026-01-09 20:28:45] 2026-01-10 01:27:19,672 | INFO     | sum of deviations: 53913288898.63574
[2026-01-09 20:28:45] 2026-01-10 01:27:19,677 | INFO     | mean x: 1767995246.1020882
[2026-01-09 20:28:45] 2026-01-10 01:27:19,677 | INFO     | mean y: 2509431.8491879352
[2026-01-09 20:28:45] 2026-01-10 01:27:19,677 | INFO     | intersect: -3836988917.7118673
[2026-01-09 20:28:45] 2026-01-10 01:27:19,679 | INFO     | chi2: 1.0342071432108508
[2026-01-09 20:28:45] 2026-01-10 01:27:19,679 | INFO     | current chi2=1.0342071432108508 (change=74.12863558213994 %)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,680 | INFO     | sum of square deviations: 23971705171.95532
[2026-01-09 20:28:45] 2026-01-10 01:27:19,688 | INFO     | sum of deviations: 13736598838.124409
[2026-01-09 20:28:45] 2026-01-10 01:27:19,688 | INFO     | mean x: 1767995398.6032863
[2026-01-09 20:28:45] 2026-01-10 01:27:19,688 | INFO     | mean y: 2516599.0539906104
[2026-01-09 20:28:45] 2026-01-10 01:27:19,688 | INFO     | intersect: -1010604635.5036522
[2026-01-09 20:28:45] 2026-01-10 01:27:19,689 | INFO     | chi2: 0.7447877877778968
[2026-01-09 20:28:45] 2026-01-10 01:27:19,689 | INFO     | current chi2=0.7447877877778968 (change=27.98466026200596 %)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,690 | INFO     | sum of square deviations: 23137497444.60802
[2026-01-09 20:28:45] 2026-01-10 01:27:19,698 | INFO     | sum of deviations: -802404287.3895454
[2026-01-09 20:28:45] 2026-01-10 01:27:19,707 | INFO     | mean x: 1767995551.1021378
[2026-01-09 20:28:45] 2026-01-10 01:27:19,707 | INFO     | mean y: 2519249.543942993
[2026-01-09 20:28:45] 2026-01-10 01:27:19,707 | INFO     | intersect: 63833020.13154818
[2026-01-09 20:28:45] 2026-01-10 01:27:19,707 | INFO     | chi2: 0.7007570472044591
[2026-01-09 20:28:45] 2026-01-10 01:27:19,708 | INFO     | current chi2=0.7007570472044591 (change=5.911850502383386 %)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,708 | INFO     | left removable region: 30
[2026-01-09 20:28:45] 2026-01-10 01:27:19,708 | INFO     | sum of square deviations: 19844824130.19749
[2026-01-09 20:28:45] 2026-01-10 01:27:19,716 | INFO     | sum of deviations: 15892185782.507496
[2026-01-09 20:28:45] 2026-01-10 01:27:19,716 | INFO     | mean x: 1767995825.5975
[2026-01-09 20:28:45] 2026-01-10 01:27:19,716 | INFO     | mean y: 2525784.3075
[2026-01-09 20:28:45] 2026-01-10 01:27:19,717 | INFO     | intersect: -1413325418.945949
[2026-01-09 20:28:45] 2026-01-10 01:27:19,717 | INFO     | chi2: 0.0035501637970239944
[2026-01-09 20:28:45] 2026-01-10 01:27:19,717 | INFO     | current memory leak: 0.80 B/s (using 400 data points, chi2=0.00)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,718 | INFO     | could have reported an average CPU frequency of 2661 MHz (18 samples)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | ..............................
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . Timing measurements:
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . get job = 0 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . initial setup = 3 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . payload setup = 39 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . stage-in = 0 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . payload execution = 26606 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . stage-out = 4 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | . log creation = 0 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,723 | INFO     | ..............................
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | 
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | job summary report
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | --------------------------------------------------
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | PanDA job id: 6963186914
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | task id: 47898826
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | errors: (none)
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | pilot state: finished 
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | transexitcode: 0
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | exeerrorcode: 0
[2026-01-09 20:28:45] 2026-01-10 01:27:19,960 | INFO     | exeerrordiag: 
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | exitcode: 0
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | exitmsg: OK
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | cpuconsumptiontime: 61838 s
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | nevents: 400
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | neventsw: 0
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | pid: 2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | pgrp: 2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | corecount: 8
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | event service: False
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 30: 2284316, 34: 2284344, 26649: 2320905, 26650: 2320904, 26655: 2329958, 26656: 2330014, 26683: 2330208}
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | --------------------------------------------------
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | 
[2026-01-09 20:28:45] 2026-01-10 01:27:19,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,041 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:28:45] 2026-01-10 01:27:20,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,046 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:28:45] 2026-01-10 01:27:20,046 | INFO     | job 6963186914 has completed (purged errors)
[2026-01-09 20:28:45] 2026-01-10 01:27:20,046 | INFO     | overall cleanup function is called
[2026-01-09 20:28:45] 2026-01-10 01:27:21,019 | INFO     | PID=2388654 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:28:45] 2026-01-10 01:27:21,020 | INFO     | .. there are 15 such processes running
[2026-01-09 20:28:45] 2026-01-10 01:27:21,063 | INFO     | --- collectZombieJob: --- 10, [2397472]
[2026-01-09 20:28:45] 2026-01-10 01:27:21,064 | INFO     | zombie collector waiting for pid 2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:21,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:28:45] 2026-01-10 01:27:21,064 | INFO     | collected zombie processes
[2026-01-09 20:28:45] 2026-01-10 01:27:21,064 | INFO     | will attempt to kill all subprocesses of pid=2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:21,731 | INFO     | process IDs to be killed: [2397472] (in reverse order)
[2026-01-09 20:28:45] 2026-01-10 01:27:21,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:28:45] 2026-01-10 01:27:21,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:28:45] 2026-01-10 01:27:22,032 | INFO     | did not find any defunct processes belonging to 2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:22,058 | INFO     | did not find any defunct processes belonging to 2397472
[2026-01-09 20:28:45] 2026-01-10 01:27:22,058 | INFO     | ready for new job
[2026-01-09 20:28:45] 2026-01-10 01:27:22,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:28:45] 2026-01-10 01:27:22,067 | INFO     | ***************************************
[2026-01-09 20:28:45] 2026-01-10 01:27:22,069 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:28:45] 2026-01-10 01:27:22,069 | INFO     | ***************************************
[2026-01-09 20:28:45] 2026-01-10 01:27:22,069 | INFO     | 
[2026-01-09 20:28:45] 2026-01-10 01:27:22,082 | INFO     | architecture information:
[2026-01-09 20:28:45] 2026-01-10 01:27:22,084 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:28:45] 2026-01-10 01:27:22,143 | INFO     | cat /etc/os-release:
[2026-01-09 20:28:45] NAME="CentOS Linux"
[2026-01-09 20:28:45] VERSION="7 (Core)"
[2026-01-09 20:28:45] ID="centos"
[2026-01-09 20:28:45] ID_LIKE="rhel fedora"
[2026-01-09 20:28:45] VERSION_ID="7"
[2026-01-09 20:28:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:28:45] ANSI_COLOR="0;31"
[2026-01-09 20:28:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:28:45] HOME_URL="https://www.centos.org/"
[2026-01-09 20:28:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:28:45] 
[2026-01-09 20:28:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:28:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:28:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:28:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:28:45] 
[2026-01-09 20:28:45] 2026-01-10 01:27:22,143 | INFO     | ***************************************
[2026-01-09 20:28:45] 2026-01-10 01:27:22,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 20:28:45] 2026-01-10 01:27:22,706 | INFO     | sufficient remaining disk space (74820091904 B)
[2026-01-09 20:28:45] 2026-01-10 01:27:22,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:28:45] 2026-01-10 01:27:22,706 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:28:45] 2026-01-10 01:27:22,706 | INFO     | update_server=False
[2026-01-09 20:28:45] 2026-01-10 01:27:22,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:28:45] 2026-01-10 01:27:22,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:28:45] 2026-01-10 01:27:22,938 | INFO     | all data control threads have been joined
[2026-01-09 20:28:45] 2026-01-10 01:27:23,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:28:45] 2026-01-10 01:27:23,010 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:28:45] 2026-01-10 01:27:23,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:28:45] 2026-01-10 01:27:23,010 | INFO     | will abort loop
[2026-01-09 20:28:45] 2026-01-10 01:27:23,045 | INFO     | all job control threads have been joined
[2026-01-09 20:28:45] 2026-01-10 01:27:23,241 | INFO     | all payload control threads have been joined
[2026-01-09 20:28:45] 2026-01-10 01:27:23,714 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:23,945 | INFO     | [data] control thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:23,984 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,016 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,052 | INFO     | [job] control thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,248 | INFO     | [payload] control thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,387 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,436 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,695 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,700 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,822 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:24,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:28:45] 2026-01-10 01:27:25,016 | INFO     | [job] validate thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:25,256 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:25,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:28:45] 2026-01-10 01:27:25,980 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:29,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:33,469 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:28:45] 2026-01-10 01:27:34,474 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:28:45] 2026-01-10 01:27:54,317 | INFO     | PID=2388654 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:28:45] 2026-01-10 01:27:54,317 | INFO     | .. there are 15 such processes running
[2026-01-09 20:28:45] 2026-01-10 01:27:54,318 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:28:45] 2026-01-10 01:27:54,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:28:45] 2026-01-10 01:27:54,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:28:45] 2026-01-10 01:28:18,694 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:28:45] 2026-01-10 01:28:19,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954789627712)>', '<ExcThread(monitor, started 139954294339328)>']
[2026-01-09 20:28:45] 2026-01-10 01:28:19,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:28:45] 2026-01-10 01:28:19,495 | INFO     | [monitor] control thread has ended
[2026-01-09 20:28:45] 2026-01-10 01:28:24,271 | INFO     | all workflow threads have been joined
[2026-01-09 20:28:45] 2026-01-10 01:28:24,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:28:45] 2026-01-10 01:28:24,272 | INFO     | traces error code: 0
[2026-01-09 20:28:45] 2026-01-10 01:28:24,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:28:45] 2026-01-10 01:28:24,735 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:28:45] 2026-01-10 01:28:24,751 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:28:45] 2026-01-10 01:28:24,778 [wrapper] pilotpid: 2388654
[2026-01-09 20:28:45] 2026-01-10 01:28:24,800 [wrapper] Pilot exit status: 0
[2026-01-09 20:28:45] 2026-01-10 01:28:24,874 [wrapper] pandaids: 6963186914
[2026-01-09 20:28:45] 2026-01-10 01:28:25,202 [wrapper] cleanup supervisor_pilot 3414646 2388655
[2026-01-09 20:28:45] 2026-01-10 01:28:25,222 [wrapper] Test setup, not cleaning
[2026-01-09 20:28:45] 2026-01-10 01:28:25,234 [wrapper] apfmon messages muted
[2026-01-09 20:28:45] 2026-01-10 01:28:25,256 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:28:45] 2026-01-10 01:28:25,274 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:28:45]  *** Error codes and diagnostics ***
[2026-01-09 20:28:45]     "exeErrorCode": 0,
[2026-01-09 20:28:45]     "exeErrorDiag": "",
[2026-01-09 20:28:45]     "pilotErrorCode": 0,
[2026-01-09 20:28:45]     "pilotErrorDiag": "",
[2026-01-09 20:28:45]  *** Listing of results directory ***
[2026-01-09 20:28:45] total 454148
[2026-01-09 20:28:45] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:28:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:00 run_atlas
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:00 job.xml
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas 224246184 Jan  9 13:00 EVNT.47898824._001411.pool.root.1
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:00 start_atlas.sh
[2026-01-09 20:28:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:00 shared
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 13:00 input.tar.gz
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:00 boinc_lockfile
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 13:00 pandaJob.out
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas        57 Jan  9 13:00 setup.sh.local
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas    989356 Jan  9 13:01 agis_schedconf.cvmfs.json
[2026-01-09 20:28:45] drwx------. 5 boincer umatlas      4096 Jan  9 13:01 pilot3
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas      6876 Jan  9 20:18 init_data.xml
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:25 boinc_task_state.xml
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas 228792397 Jan  9 20:25 HITS.47898826._036822.pool.root.1
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas      1040 Jan  9 20:26 memory_monitor_summary.json
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas    634455 Jan  9 20:26 log.47898826._036822.job.log.tgz.1
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas      7828 Jan  9 20:27 heartbeat.json
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas        95 Jan  9 20:27 pilot_heartbeat.json
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas      5082 Jan  9 20:28 pilotlog.txt
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas   3411742 Jan  9 20:28 log.47898826._036822.job.log.1
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas       357 Jan  9 20:28 output.list
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:28 runtime_log
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas   4065280 Jan  9 20:28 result.tar.gz
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 20:28 runtime_log.err
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas       657 Jan  9 20:28 QXqKDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlpgKDmHL5ynm.diag
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:28 wrapper_checkpoint.txt
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:28 boinc_mmap_file
[2026-01-09 20:28:45] -rw-r--r--. 1 boincer umatlas     20990 Jan  9 20:28 stderr.txt
[2026-01-09 20:28:45] HITS file was successfully produced:
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas 228792397 Jan  9 20:25 shared/HITS.pool.root.1
[2026-01-09 20:28:45]  *** Contents of shared directory: ***
[2026-01-09 20:28:45] total 447000
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas 224246184 Jan  9 13:00 ATLAS.root_0
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:00 start_atlas.sh
[2026-01-09 20:28:45] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 13:00 input.tar.gz
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas 228792397 Jan  9 20:25 HITS.pool.root.1
[2026-01-09 20:28:45] -rw-------. 1 boincer umatlas   4065280 Jan  9 20:28 result.tar.gz
20:28:47 (2384294): run_atlas exited; CPU time 62907.974448
20:28:47 (2384294): called boinc_finish(0)

</stderr_txt>
]]>

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