Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:02:20 (999230): wrapper (7.7.26015): starting
08:02:20 (999230): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 08:02:20] Arguments: --nthreads 4
[2026-01-10 08:02:20] Threads: 4
[2026-01-10 08:02:20] Checking for CVMFS
[2026-01-10 08:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:02:20] 2.9.2.0 4123 3447 96304 154970 0 57 27294361 36864000 0 130560 0 2573106 99.990 127930 6468 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 08:02:20] CVMFS is ok
[2026-01-10 08:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:02:20] Further information can be found at the LHC@home message board.
[2026-01-10 08:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:02:20] Checking for apptainer binary...
[2026-01-10 08:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:02:20] Running /usr/bin/apptainer --version
[2026-01-10 08:02:20] apptainer version 1.4.1-1.1
[2026-01-10 08:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:02:20] atlasA237
[2026-01-10 08:02:20] apptainer works
[2026-01-10 08:02:20] Set ATHENA_PROC_NUMBER=4
[2026-01-10 08:02:20] Set ATHENA_CORE_NUMBER=4
[2026-01-10 08:02:20] Starting ATLAS job with PandaID=6963186990
[2026-01-10 08:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:41:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:41:42] 2026-01-10 08:40:43,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:41:42] 2026-01-10 08:40:43,391 | INFO     | all payload control threads have been joined
[2026-01-10 09:41:42] 2026-01-10 08:40:43,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:41:42] 2026-01-10 08:40:43,847 | INFO     | all data control threads have been joined
[2026-01-10 09:41:42] 2026-01-10 08:40:44,054 | INFO     | all job control threads have been joined
[2026-01-10 09:41:42] 2026-01-10 08:40:44,092 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,093 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,093 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,129 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,385 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,396 | INFO     | [payload] control thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,425 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,852 | INFO     | [data] control thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:44,921 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,043 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,060 | INFO     | [job] control thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,486 | INFO     | [job] validate thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,559 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,560 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,834 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:40:45,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:41:42] 2026-01-10 08:40:49,920 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:41:42] 2026-01-10 08:41:12,680 | INFO     | PID=1003039 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:41:42] 2026-01-10 08:41:12,681 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:41:42] 2026-01-10 08:41:12,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:41:42] 2026-01-10 08:41:12,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:41:42] 2026-01-10 08:41:35,028 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:41:42] 2026-01-10 08:41:37,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723491481408)>', '<ExcThread(monitor, started 139722701649664)>']
[2026-01-10 09:41:42] 2026-01-10 08:41:37,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:41:42] 2026-01-10 08:41:37,815 | INFO     | [monitor] control thread has ended
[2026-01-10 09:41:42] 2026-01-10 08:41:42,091 | INFO     | all workflow threads have been joined
[2026-01-10 09:41:42] 2026-01-10 08:41:42,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:41:42] 2026-01-10 08:41:42,092 | INFO     | traces error code: 0
[2026-01-10 09:41:42] 2026-01-10 08:41:42,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:41:42] 2026-01-10 08:41:42,160 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:41:42] 2026-01-10 08:41:42,164 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:41:42] 2026-01-10 08:41:42,168 [wrapper] pilotpid: 1003039
[2026-01-10 09:41:42] 2026-01-10 08:41:42,171 [wrapper] Pilot exit status: 0
[2026-01-10 09:41:42] 2026-01-10 08:41:42,182 [wrapper] pandaids: 6963186990
[2026-01-10 09:41:42] 2026-01-10 08:41:42,204 [wrapper] cleanup supervisor_pilot 1021920 1003040
[2026-01-10 09:41:42] 2026-01-10 08:41:42,208 [wrapper] Test setup, not cleaning
[2026-01-10 09:41:42] 2026-01-10 08:41:42,212 [wrapper] apfmon messages muted
[2026-01-10 09:41:42] 2026-01-10 08:41:42,215 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:41:42] 2026-01-10 08:41:42,218 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:41:42]  *** Error codes and diagnostics ***
[2026-01-10 09:41:42]     "exeErrorCode": 0,
[2026-01-10 09:41:42]     "exeErrorDiag": "",
[2026-01-10 09:41:42]     "pilotErrorCode": 0,
[2026-01-10 09:41:42]     "pilotErrorDiag": "",
[2026-01-10 09:41:42]  *** Listing of results directory ***
[2026-01-10 09:41:42] total 444224
[2026-01-10 09:41:42] -rwx------ 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:41:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:02 run_atlas
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:02 job.xml
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc 225061110 Jan 10 08:02 EVNT.47898824._001414.pool.root.1
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc    592404 Jan 10 08:02 input.tar.gz
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:02 start_atlas.sh
[2026-01-10 09:41:42] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:02 shared
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:02 boinc_setup_complete
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      6371 Jan 10 08:02 init_data.xml
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:02 boinc_lockfile
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      2519 Jan 10 08:02 pandaJob.out
[2026-01-10 09:41:42] -rw------- 1 boinc boinc    989374 Jan 10 08:02 agis_schedconf.cvmfs.json
[2026-01-10 09:41:42] -rw------- 1 boinc boinc   1516240 Jan 10 08:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:41:42] drwx------ 5 boinc boinc      4096 Jan 10 08:02 pilot3
[2026-01-10 09:41:42] -rw------- 1 boinc boinc 223625480 Jan 10 09:40 HITS.47898826._036898.pool.root.1
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc       529 Jan 10 09:40 boinc_task_state.xml
[2026-01-10 09:41:42] -rw------- 1 boinc boinc      1015 Jan 10 09:40 memory_monitor_summary.json
[2026-01-10 09:41:42] -rw------- 1 boinc boinc    296802 Jan 10 09:40 log.47898826._036898.job.log.tgz.1
[2026-01-10 09:41:42] -rw------- 1 boinc boinc      7757 Jan 10 09:40 heartbeat.json
[2026-01-10 09:41:42] -rw------- 1 boinc boinc        95 Jan 10 09:41 pilot_heartbeat.json
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc        27 Jan 10 09:41 wrapper_checkpoint.txt
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      8192 Jan 10 09:41 boinc_mmap_file
[2026-01-10 09:41:42] -rw------- 1 boinc boinc      4752 Jan 10 09:41 pilotlog.txt
[2026-01-10 09:41:42] -rw------- 1 boinc boinc    855730 Jan 10 09:41 log.47898826._036898.job.log.1
[2026-01-10 09:41:42] -rw------- 1 boinc boinc       357 Jan 10 09:41 output.list
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc       620 Jan 10 09:41 runtime_log
[2026-01-10 09:41:42] -rw------- 1 boinc boinc   1167360 Jan 10 09:41 result.tar.gz
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      8912 Jan 10 09:41 runtime_log.err
[2026-01-10 09:41:42] -rw------- 1 boinc boinc       662 Jan 10 09:41 L4bKDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO3lKDmk487Wo.diag
[2026-01-10 09:41:42] -rw-r--r-- 1 boinc boinc      6993 Jan 10 09:41 stderr.txt
[2026-01-10 09:41:42] HITS file was successfully produced:
[2026-01-10 09:41:42] -rw------- 1 boinc boinc 223625480 Jan 10 09:40 shared/HITS.pool.root.1
[2026-01-10 09:41:42]  *** Contents of shared directory: ***
[2026-01-10 09:41:42] total 439920
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc 225061110 Jan 10 08:02 ATLAS.root_0
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc    592404 Jan 10 08:02 input.tar.gz
[2026-01-10 09:41:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:02 start_atlas.sh
[2026-01-10 09:41:42] -rw------- 1 boinc boinc 223625480 Jan 10 09:40 HITS.pool.root.1
[2026-01-10 09:41:42] -rw------- 1 boinc boinc   1167360 Jan 10 09:41 result.tar.gz
09:41:43 (999230): run_atlas exited; CPU time 22435.361264
09:41:43 (999230): called boinc_finish(0)

</stderr_txt>
]]>

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