Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:22 (1542183): wrapper (7.7.26015): starting
12:21:22 (1542183): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:21:22] Arguments: --nthreads 8
[2026-01-09 12:21:22] Threads: 8
[2026-01-09 12:21:22] Checking for CVMFS
[2026-01-09 12:21:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:21:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:21:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:21:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:21:22] 2.13.3.0 779065 17221 79364 154951 0 96 29955965 39288833 3768 16776704 0 7624023 99.929 835773 48349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:21:22] CVMFS is ok
[2026-01-09 12:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:21:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:21:22] Further information can be found at the LHC@home message board.
[2026-01-09 12:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:21:22] Checking for apptainer binary...
[2026-01-09 12:21:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:21:22] Running /usr/bin/apptainer --version
[2026-01-09 12:21:22] apptainer version 1.4.5-2.el9
[2026-01-09 12:21:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:21:22] c-210-16.aglt2.org
[2026-01-09 12:21:22] apptainer works
[2026-01-09 12:21:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:21:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:21:22] Starting ATLAS job with PandaID=6963186502
[2026-01-09 12:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:58:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:58:54] 2026-01-09 19:58:18,414 | INFO     | job 6963186502 has finished - writing final server update
[2026-01-09 14:58:54] 2026-01-09 19:58:18,415 | INFO     | total number of processed events: 400 (read)
[2026-01-09 14:58:54] 2026-01-09 19:58:18,415 | INFO     | executing command: lscpu
[2026-01-09 14:58:54] 2026-01-09 19:58:18,452 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 14:58:54] 2026-01-09 19:58:18,678 | INFO     | time since job start (9405s) is within the limit (349056.0s)
[2026-01-09 14:58:54] 2026-01-09 19:58:19,889 | INFO     | monitor loop #685: job 0:6963186502 is in state 'finished'
[2026-01-09 14:58:54] 2026-01-09 19:58:19,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:58:54] 2026-01-09 19:58:20,684 | INFO     | time since job start (9407s) is within the limit (349056.0s)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,902 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:58:54] 2026-01-09 19:58:21,909 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.006625
[2026-01-09 14:58:54] 2026-01-09 19:58:21,915 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963186502/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,916 | INFO     | extracted standard info from prmon json
[2026-01-09 14:58:54] 2026-01-09 19:58:21,916 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:58:54] 2026-01-09 19:58:21,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:58:54] 2026-01-09 19:58:21,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:58:54] 2026-01-09 19:58:21,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:58:54] 2026-01-09 19:58:21,921 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:58:54] 2026-01-09 19:58:21,921 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 14:58:54] 2026-01-09 19:58:21,922 | INFO     | sum of deviations: -34403867172.50001
[2026-01-09 14:58:54] 2026-01-09 19:58:21,923 | INFO     | mean x: 1767983983.5
[2026-01-09 14:58:54] 2026-01-09 19:58:21,923 | INFO     | mean y: 2654263.3571428573
[2026-01-09 14:58:54] 2026-01-09 19:58:21,923 | INFO     | intersect: 53713663735.07243
[2026-01-09 14:58:54] 2026-01-09 19:58:21,923 | INFO     | chi2: 1.6771825396674171
[2026-01-09 14:58:54] 2026-01-09 19:58:21,924 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,924 | INFO     | sum of deviations: -32190023239.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | mean x: 1767983831.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | mean y: 2657426.6577181206
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | intersect: 55488465110.13733
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | chi2: 1.672339022475344
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | current chi2=1.672339022475344 (change=0.288788911017018 %)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,925 | INFO     | right removable region: 148
[2026-01-09 14:58:54] 2026-01-09 19:58:21,926 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | sum of deviations: -56144537006.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | mean x: 1767984136.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | mean y: 2684800.2416107384
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | intersect: 96778803819.476
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | chi2: 0.29316124377913333
[2026-01-09 14:58:54] 2026-01-09 19:58:21,927 | INFO     | current chi2=0.29316124377913333 (change=82.52061198793145 %)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,928 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | sum of deviations: -54083762385.499985
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | mean x: 1767984288.5
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | mean y: 2681567.034722222
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | intersect: 103278903367.2899
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | chi2: 0.26700091159782424
[2026-01-09 14:58:54] 2026-01-09 19:58:21,929 | INFO     | current chi2=0.26700091159782424 (change=8.923530219778366 %)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,930 | INFO     | left removable region: 20
[2026-01-09 14:58:54] 2026-01-09 19:58:21,930 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | sum of deviations: -40207213528.0
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | mean x: 1767984410.5
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | mean y: 2667002.21875
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | intersect: 109322908566.50818
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | chi2: 0.2510536214533028
[2026-01-09 14:58:54] 2026-01-09 19:58:21,931 | INFO     | current memory leak: -61.83 B/s (using 128 data points, chi2=0.25)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | could have reported an average CPU frequency of 2604 MHz (9 samples)
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | ..............................
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | . Timing measurements:
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | . get job = 0 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | . initial setup = 2 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,932 | INFO     | . payload setup = 5 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,933 | INFO     | . stage-in = 0 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,933 | INFO     | . payload execution = 9378 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,933 | INFO     | . stage-out = 0 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,933 | INFO     | . log creation = 0 s
[2026-01-09 14:58:54] 2026-01-09 19:58:21,933 | INFO     | ..............................
[2026-01-09 14:58:54] 2026-01-09 19:58:22,042 | INFO     | 
[2026-01-09 14:58:54] 2026-01-09 19:58:22,042 | INFO     | job summary report
[2026-01-09 14:58:54] 2026-01-09 19:58:22,042 | INFO     | --------------------------------------------------
[2026-01-09 14:58:54] 2026-01-09 19:58:22,042 | INFO     | PanDA job id: 6963186502
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | task id: 47898826
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | errors: (none)
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | pilot state: finished 
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | transexitcode: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | exeerrorcode: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | exeerrordiag: 
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | exitcode: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:22,043 | INFO     | exitmsg: OK
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | cpuconsumptiontime: 68992 s
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | nevents: 400
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | neventsw: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | pid: 1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | pgrp: 1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | corecount: 8
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | event service: False
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | sizes: {0: 2283971, 4: 2284233, 11: 2284261, 9386: 2312649, 9387: 2312648, 9389: 2321702, 9390: 2321886, 9393: 2322144}
[2026-01-09 14:58:54] 2026-01-09 19:58:22,044 | INFO     | --------------------------------------------------
[2026-01-09 14:58:54] 2026-01-09 19:58:22,045 | INFO     | 
[2026-01-09 14:58:54] 2026-01-09 19:58:22,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 14:58:54] 2026-01-09 19:58:22,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:58:54] 2026-01-09 19:58:22,067 | INFO     | job 6963186502 has completed (purged errors)
[2026-01-09 14:58:54] 2026-01-09 19:58:22,067 | INFO     | overall cleanup function is called
[2026-01-09 14:58:54] 2026-01-09 19:58:23,075 | INFO     | --- collectZombieJob: --- 10, [1554711]
[2026-01-09 14:58:54] 2026-01-09 19:58:23,075 | INFO     | zombie collector waiting for pid 1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:23,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:58:54] 2026-01-09 19:58:23,076 | INFO     | collected zombie processes
[2026-01-09 14:58:54] 2026-01-09 19:58:23,076 | INFO     | will attempt to kill all subprocesses of pid=1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:23,314 | INFO     | process IDs to be killed: [1554711] (in reverse order)
[2026-01-09 14:58:54] 2026-01-09 19:58:23,381 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:58:54] 2026-01-09 19:58:23,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:58:54] 2026-01-09 19:58:23,388 | INFO     | did not find any defunct processes belonging to 1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:23,393 | INFO     | did not find any defunct processes belonging to 1554711
[2026-01-09 14:58:54] 2026-01-09 19:58:23,394 | INFO     | ready for new job
[2026-01-09 14:58:54] 2026-01-09 19:58:23,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:58:54] 2026-01-09 19:58:23,396 | INFO     | ***************************************
[2026-01-09 14:58:54] 2026-01-09 19:58:23,396 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:58:54] 2026-01-09 19:58:23,396 | INFO     | ***************************************
[2026-01-09 14:58:54] 2026-01-09 19:58:23,396 | INFO     | 
[2026-01-09 14:58:54] 2026-01-09 19:58:23,398 | INFO     | architecture information:
[2026-01-09 14:58:54] 2026-01-09 19:58:23,399 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:58:54] 2026-01-09 19:58:23,413 | INFO     | cat /etc/os-release:
[2026-01-09 14:58:54] NAME="CentOS Linux"
[2026-01-09 14:58:54] VERSION="7 (Core)"
[2026-01-09 14:58:54] ID="centos"
[2026-01-09 14:58:54] ID_LIKE="rhel fedora"
[2026-01-09 14:58:54] VERSION_ID="7"
[2026-01-09 14:58:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:58:54] ANSI_COLOR="0;31"
[2026-01-09 14:58:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:58:54] HOME_URL="https://www.centos.org/"
[2026-01-09 14:58:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:58:54] 
[2026-01-09 14:58:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:58:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:58:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:58:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:58:54] 
[2026-01-09 14:58:54] 2026-01-09 19:58:23,414 | INFO     | ***************************************
[2026-01-09 14:58:54] 2026-01-09 19:58:23,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 14:58:54] 2026-01-09 19:58:23,932 | INFO     | sufficient remaining disk space (49377443840 B)
[2026-01-09 14:58:54] 2026-01-09 19:58:23,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | INFO     | update_server=False
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:58:54] 2026-01-09 19:58:23,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:58:54] 2026-01-09 19:58:23,934 | INFO     | aborting loop
[2026-01-09 14:58:54] 2026-01-09 19:58:24,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:58:54] 2026-01-09 19:58:24,919 | INFO     | all job control threads have been joined
[2026-01-09 14:58:54] 2026-01-09 19:58:24,921 | INFO     | all data control threads have been joined
[2026-01-09 14:58:54] 2026-01-09 19:58:24,938 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:24,939 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:24,939 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,050 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,144 | INFO     | all payload control threads have been joined
[2026-01-09 14:58:54] 2026-01-09 19:58:25,282 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,584 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,924 | INFO     | [job] control thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,926 | INFO     | [data] control thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:25,939 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:26,146 | INFO     | [payload] control thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:26,188 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:26,305 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:26,306 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:26,308 | INFO     | [job] validate thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:28,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:34,637 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:58:54] 2026-01-09 19:58:35,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:58:54] 2026-01-09 19:58:48,642 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:58:54] 2026-01-09 19:58:49,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285790054208)>', '<ExcThread(monitor, started 140285241718528)>']
[2026-01-09 14:58:54] 2026-01-09 19:58:54,060 | INFO     | PID=1545862 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | INFO     | .. there are 5 such processes running
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:58:54] 2026-01-09 19:58:54,061 | INFO     | [monitor] control thread has ended
[2026-01-09 14:58:54] 2026-01-09 19:58:54,287 | INFO     | all workflow threads have been joined
[2026-01-09 14:58:54] 2026-01-09 19:58:54,287 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:58:54] 2026-01-09 19:58:54,287 | INFO     | traces error code: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:54,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:58:54] 2026-01-09 19:58:54,413 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:58:54] 2026-01-09 19:58:54,415 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:58:54] 2026-01-09 19:58:54,418 [wrapper] pilotpid: 1545862
[2026-01-09 14:58:54] 2026-01-09 19:58:54,420 [wrapper] Pilot exit status: 0
[2026-01-09 14:58:54] 2026-01-09 19:58:54,429 [wrapper] pandaids: 6963186502
[2026-01-09 14:58:54] 2026-01-09 19:58:54,473 [wrapper] cleanup supervisor_pilot 1780512 1545863
[2026-01-09 14:58:54] 2026-01-09 19:58:54,475 [wrapper] Test setup, not cleaning
[2026-01-09 14:58:54] 2026-01-09 19:58:54,478 [wrapper] apfmon messages muted
[2026-01-09 14:58:54] 2026-01-09 19:58:54,480 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:58:54] 2026-01-09 19:58:54,482 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:58:54]  *** Error codes and diagnostics ***
[2026-01-09 14:58:54]     "exeErrorCode": 0,
[2026-01-09 14:58:54]     "exeErrorDiag": "",
[2026-01-09 14:58:54]     "pilotErrorCode": 0,
[2026-01-09 14:58:54]     "pilotErrorDiag": "",
[2026-01-09 14:58:54]  *** Listing of results directory ***
[2026-01-09 14:58:54] total 441100
[2026-01-09 14:58:54] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:58:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:21 run_atlas
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:21 job.xml
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas 225515846 Jan  9 12:21 EVNT.47898824._001398.pool.root.1
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:21 start_atlas.sh
[2026-01-09 14:58:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:21 shared
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 12:21 input.tar.gz
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:21 boinc_lockfile
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:21 pandaJob.out
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas        57 Jan  9 12:21 setup.sh.local
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas    989356 Jan  9 12:21 agis_schedconf.cvmfs.json
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:58:54] drwx------. 5 boincer umatlas      4096 Jan  9 12:21 pilot3
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 14:56 init_data.xml
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas       529 Jan  9 14:57 boinc_task_state.xml
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas 218814511 Jan  9 14:57 HITS.47898826._036478.pool.root.1
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas        95 Jan  9 14:58 pilot_heartbeat.json
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas      1030 Jan  9 14:58 memory_monitor_summary.json
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas    385295 Jan  9 14:58 log.47898826._036478.job.log.tgz.1
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas      7815 Jan  9 14:58 heartbeat.json
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas        27 Jan  9 14:58 wrapper_checkpoint.txt
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:58 boinc_mmap_file
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas      4895 Jan  9 14:58 pilotlog.txt
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas   1332918 Jan  9 14:58 log.47898826._036478.job.log.1
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas       357 Jan  9 14:58 output.list
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:58 runtime_log
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas   1740800 Jan  9 14:58 result.tar.gz
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas       653 Jan  9 14:58 X2TKDma3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRogKDmOcS5Tm.diag
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 14:58 runtime_log.err
[2026-01-09 14:58:54] -rw-r--r--. 1 boincer umatlas     21307 Jan  9 14:58 stderr.txt
[2026-01-09 14:58:54] HITS file was successfully produced:
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas 218814511 Jan  9 14:57 shared/HITS.pool.root.1
[2026-01-09 14:58:54]  *** Contents of shared directory: ***
[2026-01-09 14:58:54] total 436220
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas 225515846 Jan  9 12:21 ATLAS.root_0
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:21 start_atlas.sh
[2026-01-09 14:58:54] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 12:21 input.tar.gz
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas 218814511 Jan  9 14:57 HITS.pool.root.1
[2026-01-09 14:58:54] -rw-------. 1 boincer umatlas   1740800 Jan  9 14:58 result.tar.gz
14:58:56 (1542183): run_atlas exited; CPU time 69146.069756
14:58:56 (1542183): called boinc_finish(0)

</stderr_txt>
]]>

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