Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:33 (971721): wrapper (7.7.26015): starting
06:25:33 (971721): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 06:25:33] Arguments: --nthreads 4
[2026-01-10 06:25:33] Threads: 4
[2026-01-10 06:25:33] Checking for CVMFS
[2026-01-10 06:25:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:25:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:25:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:25:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:25:33] 2.9.2.0 4123 3350 95980 154969 0 56 27288482 36864000 0 130560 0 2501794 99.990 126567 6424 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 06:25:33] CVMFS is ok
[2026-01-10 06:25:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:25:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:25:33] Further information can be found at the LHC@home message board.
[2026-01-10 06:25:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:25:33] Checking for apptainer binary...
[2026-01-10 06:25:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:25:33] Running /usr/bin/apptainer --version
[2026-01-10 06:25:33] apptainer version 1.4.1-1.1
[2026-01-10 06:25:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:25:34] atlasA237
[2026-01-10 06:25:34] apptainer works
[2026-01-10 06:25:34] Set ATHENA_PROC_NUMBER=4
[2026-01-10 06:25:34] Set ATHENA_CORE_NUMBER=4
[2026-01-10 06:25:34] Starting ATLAS job with PandaID=6963167881
[2026-01-10 06:25:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:01:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:01:55] 2026-01-10 07:00:57,339 | INFO     | all data control threads have been joined
[2026-01-10 08:01:55] 2026-01-10 07:00:57,747 | INFO     | all payload control threads have been joined
[2026-01-10 08:01:55] 2026-01-10 07:00:57,918 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:57,919 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:57,952 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,073 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,345 | INFO     | [data] control thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,352 | INFO     | all job control threads have been joined
[2026-01-10 08:01:55] 2026-01-10 07:00:58,753 | INFO     | [payload] control thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,754 | INFO     | [job] validate thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,815 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,834 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:58,985 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:59,077 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:59,202 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:59,264 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:59,358 | INFO     | [job] control thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:00:59,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:01:55] 2026-01-10 07:01:03,419 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:01:55] 2026-01-10 07:01:27,260 | INFO     | PID=975516 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 08:01:55] 2026-01-10 07:01:27,261 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:01:55] 2026-01-10 07:01:27,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:01:55] 2026-01-10 07:01:27,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:01:55] 2026-01-10 07:01:48,296 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:01:55] 2026-01-10 07:01:50,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168440948544)>', '<ExcThread(monitor, started 140167692134144)>']
[2026-01-10 08:01:55] 2026-01-10 07:01:50,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:01:55] 2026-01-10 07:01:50,383 | INFO     | [monitor] control thread has ended
[2026-01-10 08:01:55] 2026-01-10 07:01:55,195 | INFO     | all workflow threads have been joined
[2026-01-10 08:01:55] 2026-01-10 07:01:55,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:01:55] 2026-01-10 07:01:55,195 | INFO     | traces error code: 0
[2026-01-10 08:01:55] 2026-01-10 07:01:55,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:01:55] 2026-01-10 07:01:55,266 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:01:55] 2026-01-10 07:01:55,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:01:55] 2026-01-10 07:01:55,274 [wrapper] pilotpid: 975516
[2026-01-10 08:01:55] 2026-01-10 07:01:55,278 [wrapper] Pilot exit status: 0
[2026-01-10 08:01:55] 2026-01-10 07:01:55,288 [wrapper] pandaids: 6963167881
[2026-01-10 08:01:55] 2026-01-10 07:01:55,311 [wrapper] cleanup supervisor_pilot  994414 975517
[2026-01-10 08:01:55] 2026-01-10 07:01:55,315 [wrapper] Test setup, not cleaning
[2026-01-10 08:01:55] 2026-01-10 07:01:55,319 [wrapper] apfmon messages muted
[2026-01-10 08:01:55] 2026-01-10 07:01:55,322 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:01:55] 2026-01-10 07:01:55,326 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:01:55]  *** Error codes and diagnostics ***
[2026-01-10 08:01:55]     "exeErrorCode": 0,
[2026-01-10 08:01:55]     "exeErrorDiag": "",
[2026-01-10 08:01:55]     "pilotErrorCode": 0,
[2026-01-10 08:01:55]     "pilotErrorDiag": "",
[2026-01-10 08:01:55]  *** Listing of results directory ***
[2026-01-10 08:01:55] total 437324
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 08:01:55] -rwx------ 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:03 queuedata.json
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc       100 Jan 10 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:01:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 06:25 run_atlas
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc       105 Jan 10 06:25 job.xml
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc 224693909 Jan 10 06:25 EVNT.47898824._001342.pool.root.1
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc    592401 Jan 10 06:25 input.tar.gz
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:25 start_atlas.sh
[2026-01-10 08:01:55] drwxrwx--x 2 boinc boinc      4096 Jan 10 06:25 shared
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:25 boinc_setup_complete
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      6371 Jan 10 06:25 init_data.xml
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:25 boinc_lockfile
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      2520 Jan 10 06:25 pandaJob.out
[2026-01-10 08:01:55] -rw------- 1 boinc boinc    989374 Jan 10 06:25 agis_schedconf.cvmfs.json
[2026-01-10 08:01:55] -rw------- 1 boinc boinc   1516240 Jan 10 06:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:01:55] drwx------ 5 boinc boinc      4096 Jan 10 06:25 pilot3
[2026-01-10 08:01:55] -rw------- 1 boinc boinc 217017697 Jan 10 08:00 HITS.47898826._036083.pool.root.1
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc       529 Jan 10 08:00 boinc_task_state.xml
[2026-01-10 08:01:55] -rw------- 1 boinc boinc      1018 Jan 10 08:00 memory_monitor_summary.json
[2026-01-10 08:01:55] -rw------- 1 boinc boinc    276103 Jan 10 08:00 log.47898826._036083.job.log.tgz.1
[2026-01-10 08:01:55] -rw------- 1 boinc boinc      7769 Jan 10 08:00 heartbeat.json
[2026-01-10 08:01:55] -rw------- 1 boinc boinc        95 Jan 10 08:01 pilot_heartbeat.json
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      8192 Jan 10 08:01 boinc_mmap_file
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc        27 Jan 10 08:01 wrapper_checkpoint.txt
[2026-01-10 08:01:55] -rw------- 1 boinc boinc      4751 Jan 10 08:01 pilotlog.txt
[2026-01-10 08:01:55] -rw------- 1 boinc boinc    831380 Jan 10 08:01 log.47898826._036083.job.log.1
[2026-01-10 08:01:55] -rw------- 1 boinc boinc       357 Jan 10 08:01 output.list
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc       620 Jan 10 08:01 runtime_log
[2026-01-10 08:01:55] -rw------- 1 boinc boinc   1126400 Jan 10 08:01 result.tar.gz
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      8912 Jan 10 08:01 runtime_log.err
[2026-01-10 08:01:55] -rw------- 1 boinc boinc       662 Jan 10 08:01 bQdLDmZ1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDngKDmPD5mun.diag
[2026-01-10 08:01:55] -rw-r--r-- 1 boinc boinc      6733 Jan 10 08:01 stderr.txt
[2026-01-10 08:01:55] HITS file was successfully produced:
[2026-01-10 08:01:55] -rw------- 1 boinc boinc 217017697 Jan 10 08:00 shared/HITS.pool.root.1
[2026-01-10 08:01:55]  *** Contents of shared directory: ***
[2026-01-10 08:01:55] total 433064
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc 224693909 Jan 10 06:25 ATLAS.root_0
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc    592401 Jan 10 06:25 input.tar.gz
[2026-01-10 08:01:55] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:25 start_atlas.sh
[2026-01-10 08:01:55] -rw------- 1 boinc boinc 217017697 Jan 10 08:00 HITS.pool.root.1
[2026-01-10 08:01:55] -rw------- 1 boinc boinc   1126400 Jan 10 08:01 result.tar.gz
08:02:17 (971721): run_atlas exited; CPU time 21750.606841
08:02:17 (971721): called boinc_finish(0)

</stderr_txt>
]]>

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