Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:46 (27653): wrapper (7.7.26015): starting
20:46:46 (27653): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:46:46] Arguments: --nthreads 8
[2026-01-09 20:46:46] Threads: 8
[2026-01-09 20:46:46] Checking for CVMFS
[2026-01-09 20:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:46:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:46:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:46:46] 2.11.2.0 16377 35831 96088 154955 3 56 20975926 25165824 0 130560 0 15611700 99.833 9007164 2145 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:46:46] CVMFS is ok
[2026-01-09 20:46:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:46:46] Checking for apptainer binary...
[2026-01-09 20:46:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:46:46] Running /usr/bin/apptainer --version
[2026-01-09 20:46:46] apptainer version 1.3.2-1.el7
[2026-01-09 20:46:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:46:48] cg-vwn414.simple-grid.lan
[2026-01-09 20:46:48] apptainer works
[2026-01-09 20:46:48] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:46:48] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:46:48] Starting ATLAS job with PandaID=6963186973
[2026-01-09 20:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:43:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:43:38] 2026-01-09 23:42:30,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,630 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:43:38] 2026-01-09 23:42:30,631 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 00:43:38] 2026-01-09 23:42:30,633 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963186973/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,634 | INFO     | extracted standard info from prmon json
[2026-01-10 00:43:38] 2026-01-09 23:42:30,634 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:43:38] 2026-01-09 23:42:30,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:43:38] 2026-01-09 23:42:30,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:43:38] 2026-01-09 23:42:30,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:43:38] 2026-01-09 23:42:30,641 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:43:38] 2026-01-09 23:42:30,641 | INFO     | sum of square deviations: 3772712597.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,643 | INFO     | sum of deviations: -20016755391.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,643 | INFO     | mean x: 1767995040.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,644 | INFO     | mean y: 2489073.0086956522
[2026-01-10 00:43:38] 2026-01-09 23:42:30,644 | INFO     | intersect: 9382881388.511503
[2026-01-10 00:43:38] 2026-01-09 23:42:30,646 | INFO     | chi2: 3.1704142135029207
[2026-01-10 00:43:38] 2026-01-09 23:42:30,647 | INFO     | sum of square deviations: 3531973200.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,649 | INFO     | sum of deviations: 10735673650.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,649 | INFO     | mean x: 1767994888.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,649 | INFO     | mean y: 2508298.351111111
[2026-01-10 00:43:38] 2026-01-09 23:42:30,649 | INFO     | intersect: -5371432855.119787
[2026-01-10 00:43:38] 2026-01-09 23:42:30,650 | INFO     | chi2: 1.6004449601339292
[2026-01-10 00:43:38] 2026-01-09 23:42:30,650 | INFO     | current chi2=1.6004449601339292 (change=49.519373420748295 %)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,650 | INFO     | sum of square deviations: 3301699115.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,652 | INFO     | sum of deviations: 10431249459.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,652 | INFO     | mean x: 1767994735.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,653 | INFO     | mean y: 2508096.7409090907
[2026-01-10 00:43:38] 2026-01-09 23:42:30,653 | INFO     | intersect: -5583220186.401942
[2026-01-10 00:43:38] 2026-01-09 23:42:30,656 | INFO     | chi2: 1.6009919172550693
[2026-01-10 00:43:38] 2026-01-09 23:42:30,656 | INFO     | current chi2=1.6009919172550693 (change=-0.03417531591303748 %)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,657 | INFO     | right removable region: 219
[2026-01-10 00:43:38] 2026-01-09 23:42:30,657 | INFO     | sum of square deviations: 3531973200.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,659 | INFO     | sum of deviations: -53987365824.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,659 | INFO     | mean x: 1767995193.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,659 | INFO     | mean y: 2510368.1555555556
[2026-01-10 00:43:38] 2026-01-09 23:42:30,659 | INFO     | intersect: 27026895281.258656
[2026-01-10 00:43:38] 2026-01-09 23:42:30,660 | INFO     | chi2: 1.7610448696113954
[2026-01-10 00:43:38] 2026-01-09 23:42:30,660 | INFO     | current chi2=1.7610448696113954 (change=44.45379212246037 %)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,660 | INFO     | sum of square deviations: 3301699115.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,670 | INFO     | sum of deviations: -51247133675.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,670 | INFO     | mean x: 1767995345.5
[2026-01-10 00:43:38] 2026-01-09 23:42:30,670 | INFO     | mean y: 2508516.4318181816
[2026-01-10 00:43:38] 2026-01-09 23:42:30,670 | INFO     | intersect: 27444346991.922432
[2026-01-10 00:43:38] 2026-01-09 23:42:30,671 | INFO     | chi2: 1.746735629656591
[2026-01-10 00:43:38] 2026-01-09 23:42:30,671 | INFO     | current chi2=1.746735629656591 (change=0.8125426104538696 %)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,671 | INFO     | left removable region: 20
[2026-01-10 00:43:38] 2026-01-09 23:42:30,671 | INFO     | sum of square deviations: 2443580700.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,673 | INFO     | sum of deviations: -5674406049.999996
[2026-01-10 00:43:38] 2026-01-09 23:42:30,673 | INFO     | mean x: 1767995315.0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,673 | INFO     | mean y: 2517571.879396985
[2026-01-10 00:43:38] 2026-01-09 23:42:30,673 | INFO     | intersect: 4108100543.5437455
[2026-01-10 00:43:38] 2026-01-09 23:42:30,674 | INFO     | chi2: 0.06782184497360894
[2026-01-10 00:43:38] 2026-01-09 23:42:30,674 | INFO     | current memory leak: -2.32 B/s (using 199 data points, chi2=0.07)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | ..............................
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | . Timing measurements:
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | . get job = 0 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | . initial setup = 2 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,675 | INFO     | . payload setup = 7 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,676 | INFO     | . stage-in = 0 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,676 | INFO     | . payload execution = 13981 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,676 | INFO     | . stage-out = 4 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,676 | INFO     | . log creation = 1 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,676 | INFO     | ..............................
[2026-01-10 00:43:38] 2026-01-09 23:42:30,855 | INFO     | 
[2026-01-10 00:43:38] 2026-01-09 23:42:30,855 | INFO     | job summary report
[2026-01-10 00:43:38] 2026-01-09 23:42:30,855 | INFO     | --------------------------------------------------
[2026-01-10 00:43:38] 2026-01-09 23:42:30,855 | INFO     | PanDA job id: 6963186973
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | task id: 47898826
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | errors: (none)
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | pilot state: finished 
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | transexitcode: 0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | exeerrorcode: 0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | exeerrordiag: 
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | exitcode: 0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | exitmsg: OK
[2026-01-10 00:43:38] 2026-01-09 23:42:30,856 | INFO     | cpuconsumptiontime: 82091 s
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | nevents: 400
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | neventsw: 0
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | pid: 5422
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | pgrp: 5422
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | corecount: 8
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | event service: False
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | sizes: {0: 2283142, 1: 2283998, 7: 2284260, 12: 2284288, 13993: 2314427, 13994: 2314426, 13999: 2323608, 14002: 2323664, 14110: 2323858}
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | --------------------------------------------------
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | 
[2026-01-10 00:43:38] 2026-01-09 23:42:30,857 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 00:43:38] 2026-01-09 23:42:31,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:43:38] 2026-01-09 23:42:31,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,332 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:43:38] 2026-01-09 23:42:31,332 | INFO     | job 6963186973 has completed (purged errors)
[2026-01-10 00:43:38] 2026-01-09 23:42:31,332 | INFO     | overall cleanup function is called
[2026-01-10 00:43:38] 2026-01-09 23:42:32,341 | INFO     | --- collectZombieJob: --- 10, [5422]
[2026-01-10 00:43:38] 2026-01-09 23:42:32,341 | INFO     | zombie collector waiting for pid 5422
[2026-01-10 00:43:38] 2026-01-09 23:42:32,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:43:38] 2026-01-09 23:42:32,341 | INFO     | collected zombie processes
[2026-01-10 00:43:38] 2026-01-09 23:42:32,342 | INFO     | will attempt to kill all subprocesses of pid=5422
[2026-01-10 00:43:38] 2026-01-09 23:42:32,424 | INFO     | process IDs to be killed: [5422] (in reverse order)
[2026-01-10 00:43:38] 2026-01-09 23:42:33,351 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:43:38] 2026-01-09 23:42:33,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:43:38] 2026-01-09 23:42:33,361 | INFO     | did not find any defunct processes belonging to 5422
[2026-01-10 00:43:38] 2026-01-09 23:42:33,363 | INFO     | did not find any defunct processes belonging to 5422
[2026-01-10 00:43:38] 2026-01-09 23:42:33,363 | INFO     | ready for new job
[2026-01-10 00:43:38] 2026-01-09 23:42:33,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:43:38] 2026-01-09 23:42:33,365 | INFO     | ***************************************
[2026-01-10 00:43:38] 2026-01-09 23:42:33,366 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:43:38] 2026-01-09 23:42:33,366 | INFO     | ***************************************
[2026-01-10 00:43:38] 2026-01-09 23:42:33,366 | INFO     | 
[2026-01-10 00:43:38] 2026-01-09 23:42:33,367 | INFO     | pilot is running in a VM
[2026-01-10 00:43:38] 2026-01-09 23:42:33,367 | INFO     | architecture information:
[2026-01-10 00:43:38] 2026-01-09 23:42:33,382 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:43:38] 2026-01-09 23:42:33,623 | INFO     | cat /etc/os-release:
[2026-01-10 00:43:38] NAME="CentOS Linux"
[2026-01-10 00:43:38] VERSION="7 (Core)"
[2026-01-10 00:43:38] ID="centos"
[2026-01-10 00:43:38] ID_LIKE="rhel fedora"
[2026-01-10 00:43:38] VERSION_ID="7"
[2026-01-10 00:43:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:43:38] ANSI_COLOR="0;31"
[2026-01-10 00:43:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:43:38] HOME_URL="https://www.centos.org/"
[2026-01-10 00:43:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:43:38] 
[2026-01-10 00:43:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:43:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:43:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:43:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:43:38] 
[2026-01-10 00:43:38] 2026-01-09 23:42:33,624 | INFO     | ***************************************
[2026-01-10 00:43:38] 2026-01-09 23:42:34,127 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 00:43:38] 2026-01-09 23:42:34,418 | INFO     | sufficient remaining disk space (497583915008 B)
[2026-01-10 00:43:38] 2026-01-09 23:42:34,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:43:38] 2026-01-09 23:42:34,419 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:43:38] 2026-01-09 23:42:34,419 | INFO     | update_server=False
[2026-01-10 00:43:38] 2026-01-09 23:42:34,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:43:38] 2026-01-09 23:42:34,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:43:38] 2026-01-09 23:42:34,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:43:38] 2026-01-09 23:42:34,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:43:38] 2026-01-09 23:42:34,427 | INFO     | aborting loop
[2026-01-10 00:43:38] 2026-01-09 23:42:34,864 | INFO     | all job control threads have been joined
[2026-01-10 00:43:38] 2026-01-09 23:42:34,961 | INFO     | all data control threads have been joined
[2026-01-10 00:43:38] 2026-01-09 23:42:35,424 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:35,433 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:35,869 | INFO     | all payload control threads have been joined
[2026-01-10 00:43:38] 2026-01-09 23:42:35,870 | INFO     | [job] control thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:35,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:43:38] 2026-01-09 23:42:35,950 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:35,967 | INFO     | [data] control thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,138 | INFO     | [job] validate thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,148 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,257 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,272 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,434 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,661 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,703 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,811 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,876 | INFO     | [payload] control thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:36,880 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:42:38,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:43:38] 2026-01-09 23:43:03,150 | INFO     | PID=31395 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:43:38] 2026-01-09 23:43:03,150 | INFO     | .. there are 2 such processes running
[2026-01-10 00:43:38] 2026-01-09 23:43:03,151 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:43:38] 2026-01-09 23:43:03,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:43:38] 2026-01-09 23:43:03,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:43:38] 2026-01-09 23:43:28,347 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:43:38] 2026-01-09 23:43:29,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180670007104)>', '<ExcThread(monitor, started 140179880802048)>']
[2026-01-10 00:43:38] 2026-01-09 23:43:30,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:43:38] 2026-01-09 23:43:30,313 | INFO     | [monitor] control thread has ended
[2026-01-10 00:43:38] 2026-01-09 23:43:34,692 | INFO     | all workflow threads have been joined
[2026-01-10 00:43:38] 2026-01-09 23:43:34,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:43:38] 2026-01-09 23:43:34,692 | INFO     | traces error code: 0
[2026-01-10 00:43:38] 2026-01-09 23:43:34,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:43:38] 2026-01-09 23:43:34,917 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:43:38] 2026-01-09 23:43:34,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:43:38] 2026-01-09 23:43:34,923 [wrapper] pilotpid: 31395
[2026-01-10 00:43:38] 2026-01-09 23:43:34,926 [wrapper] Pilot exit status: 0
[2026-01-10 00:43:38] 2026-01-09 23:43:34,979 [wrapper] pandaids: 6963186973
[2026-01-10 00:43:38] 2026-01-09 23:43:35,024 [wrapper] cleanup supervisor_pilot  9432 31396
[2026-01-10 00:43:38] 2026-01-09 23:43:35,061 [wrapper] Test setup, not cleaning
[2026-01-10 00:43:38] 2026-01-09 23:43:35,178 [wrapper] apfmon messages muted
[2026-01-10 00:43:38] 2026-01-09 23:43:35,278 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:43:38] 2026-01-09 23:43:35,393 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:43:38]  *** Error codes and diagnostics ***
[2026-01-10 00:43:38]     "exeErrorCode": 0,
[2026-01-10 00:43:38]     "exeErrorDiag": "",
[2026-01-10 00:43:38]     "pilotErrorCode": 0,
[2026-01-10 00:43:38]     "pilotErrorDiag": "",
[2026-01-10 00:43:38]  *** Listing of results directory ***
[2026-01-10 00:43:38] total 451008
[2026-01-10 00:43:38] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:43:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:46 run_atlas
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:46 job.xml
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc 225061110 Jan  9 20:46 EVNT.47898824._001414.pool.root.1
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:46 start_atlas.sh
[2026-01-10 00:43:38] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:46 shared
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc    592404 Jan  9 20:46 input.tar.gz
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc      6390 Jan  9 20:46 init_data.xml
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:46 boinc_lockfile
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc      2519 Jan  9 20:46 pandaJob.out
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc    989364 Jan  9 20:47 agis_schedconf.cvmfs.json
[2026-01-10 00:43:38] drwx------. 5 boinc boinc      4096 Jan  9 20:47 pilot3
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc 228201857 Jan 10 00:39 HITS.47898826._036881.pool.root.1
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc       530 Jan 10 00:39 boinc_task_state.xml
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc      1015 Jan 10 00:40 memory_monitor_summary.json
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc   1516240 Jan 10 00:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc    444822 Jan 10 00:40 log.47898826._036881.job.log.tgz.1
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc      7777 Jan 10 00:42 heartbeat.json
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc        95 Jan 10 00:43 pilot_heartbeat.json
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc      8192 Jan 10 00:43 boinc_mmap_file
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc        28 Jan 10 00:43 wrapper_checkpoint.txt
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc      4884 Jan 10 00:43 pilotlog.txt
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc   1888421 Jan 10 00:43 log.47898826._036881.job.log.1
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc       357 Jan 10 00:43 output.list
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc       620 Jan 10 00:43 runtime_log
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc   2355200 Jan 10 00:43 result.tar.gz
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc      8817 Jan 10 00:43 runtime_log.err
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc       656 Jan 10 00:43 cdQODmu3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm72lKDmkIJRRn.diag
[2026-01-10 00:43:38] -rw-r--r--. 1 boinc boinc     20744 Jan 10 00:43 stderr.txt
[2026-01-10 00:43:38] HITS file was successfully produced:
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc 228201857 Jan 10 00:39 shared/HITS.pool.root.1
[2026-01-10 00:43:38]  *** Contents of shared directory: ***
[2026-01-10 00:43:38] total 445540
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc 225061110 Jan  9 20:46 ATLAS.root_0
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:46 start_atlas.sh
[2026-01-10 00:43:38] -rw-r--r--. 2 boinc boinc    592404 Jan  9 20:46 input.tar.gz
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc 228201857 Jan 10 00:39 HITS.pool.root.1
[2026-01-10 00:43:38] -rw-------. 1 boinc boinc   2355200 Jan 10 00:43 result.tar.gz
00:43:40 (27653): run_atlas exited; CPU time 82202.160765
00:43:40 (27653): called boinc_finish(0)

</stderr_txt>
]]>

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