Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:34 (1098872): wrapper (7.7.26015): starting
12:37:34 (1098872): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:37:34] Arguments: --nthreads 8
[2026-01-09 12:37:34] Threads: 8
[2026-01-09 12:37:34] Checking for CVMFS
[2026-01-09 12:37:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:37:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:37:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:37:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:37:35] 2.13.3.0 8635 23187 157860 154951 2 307 31219648 40960001 17833 16776704 0 35502346 99.755 21632259 38966 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:37:35] CVMFS is ok
[2026-01-09 12:37:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:37:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:37:35] Further information can be found at the LHC@home message board.
[2026-01-09 12:37:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:37:35] Checking for apptainer binary...
[2026-01-09 12:37:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:37:35] Running /usr/bin/apptainer --version
[2026-01-09 12:37:35] apptainer version 1.4.5-2.el9
[2026-01-09 12:37:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:37:35] c-212-8.aglt2.org
[2026-01-09 12:37:35] apptainer works
[2026-01-09 12:37:35] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:37:35] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:37:35] Starting ATLAS job with PandaID=6963186488
[2026-01-09 12:37:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:49:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:49:18] 2026-01-09 19:48:15,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:49:18] 2026-01-09 19:48:15,258 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3131.4974687500003
[2026-01-09 14:49:18] 2026-01-09 19:48:15,267 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963186488/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,268 | INFO     | extracted standard info from prmon json
[2026-01-09 14:49:18] 2026-01-09 19:48:15,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:49:18] 2026-01-09 19:48:15,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:49:18] 2026-01-09 19:48:15,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:49:18] 2026-01-09 19:48:15,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | sum of deviations: -660981604.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | mean x: 1767984207.5
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | mean y: 2491783.578125
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | intersect: 1799648412.494216
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | chi2: 2.3031643254517413
[2026-01-09 14:49:18] 2026-01-09 19:48:15,270 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | sum of deviations: 7319479669.999998
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | mean x: 1767984055.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | mean y: 2507871.8943089433
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | intersect: -22425644684.746788
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | chi2: 1.633587110035833
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | current chi2=1.633587110035833 (change=29.072055693836692 %)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | sum of square deviations: 509440249.5
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | sum of deviations: 7205320488.000002
[2026-01-09 14:49:18] 2026-01-09 19:48:15,271 | INFO     | mean x: 1767983902.5
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | mean y: 2507614.084745763
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | intersect: -25003154281.771103
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | chi2: 1.636208119452445
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | current chi2=1.636208119452445 (change=-0.16044503537704988 %)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | right removable region: 117
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | sum of deviations: -20577912264.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | mean x: 1767984360.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | mean y: 2532527.837398374
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | intersect: 63056828185.59044
[2026-01-09 14:49:18] 2026-01-09 19:48:15,272 | INFO     | chi2: 0.788436759446153
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | current chi2=0.788436759446153 (change=65.76723811091901 %)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | sum of square deviations: 509440249.5
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | sum of deviations: -21112446876.500008
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | mean x: 1767984512.5
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | mean y: 2533617.838983051
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | intersect: 73272125361.45526
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | chi2: 0.7628302418307282
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | current chi2=0.7628302418307282 (change=3.2477579601200195 %)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | left removable region: 20
[2026-01-09 14:49:18] 2026-01-09 19:48:15,273 | INFO     | sum of square deviations: 282974608.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | sum of deviations: -7840473045.000002
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | mean x: 1767984482.0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | mean y: 2541392.237113402
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | intersect: 48988684612.19447
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | chi2: 0.05212677999551747
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | current memory leak: -27.71 B/s (using 97 data points, chi2=0.05)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | could have reported an average CPU frequency of 3155 MHz (8 samples)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | ..............................
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . Timing measurements:
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . get job = 0 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . initial setup = 3 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . payload setup = 13 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . stage-in = 0 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . payload execution = 7759 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . stage-out = 0 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,274 | INFO     | . log creation = 0 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,275 | INFO     | ..............................
[2026-01-09 14:49:18] 2026-01-09 19:48:15,314 | INFO     | 
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | job summary report
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | --------------------------------------------------
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | PanDA job id: 6963186488
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | task id: 47898826
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | errors: (none)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | pilot state: finished 
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | transexitcode: 0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | exeerrorcode: 0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | exeerrordiag: 
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | exitcode: 0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | exitmsg: OK
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | cpuconsumptiontime: 45824 s
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | nevents: 400
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | neventsw: 0
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | pid: 1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | pgrp: 1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | corecount: 8
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | event service: False
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2284289, 22: 2284289, 7776: 2311771, 7777: 2320953, 7782: 2321091}
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | --------------------------------------------------
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | 
[2026-01-09 14:49:18] 2026-01-09 19:48:15,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 14:49:18] 2026-01-09 19:48:15,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | job 6963186488 has completed (purged errors)
[2026-01-09 14:49:18] 2026-01-09 19:48:15,331 | INFO     | overall cleanup function is called
[2026-01-09 14:49:18] 2026-01-09 19:48:16,340 | INFO     | --- collectZombieJob: --- 10, [1109363]
[2026-01-09 14:49:18] 2026-01-09 19:48:16,341 | INFO     | zombie collector waiting for pid 1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:16,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:49:18] 2026-01-09 19:48:16,341 | INFO     | collected zombie processes
[2026-01-09 14:49:18] 2026-01-09 19:48:16,341 | INFO     | will attempt to kill all subprocesses of pid=1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:16,748 | INFO     | process IDs to be killed: [1109363] (in reverse order)
[2026-01-09 14:49:18] 2026-01-09 19:48:16,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:49:18] 2026-01-09 19:48:16,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:49:18] 2026-01-09 19:48:16,890 | INFO     | did not find any defunct processes belonging to 1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:16,905 | INFO     | did not find any defunct processes belonging to 1109363
[2026-01-09 14:49:18] 2026-01-09 19:48:16,906 | INFO     | ready for new job
[2026-01-09 14:49:18] 2026-01-09 19:48:16,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:49:18] 2026-01-09 19:48:16,908 | INFO     | ***************************************
[2026-01-09 14:49:18] 2026-01-09 19:48:16,908 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:49:18] 2026-01-09 19:48:16,908 | INFO     | ***************************************
[2026-01-09 14:49:18] 2026-01-09 19:48:16,908 | INFO     | 
[2026-01-09 14:49:18] 2026-01-09 19:48:16,913 | INFO     | architecture information:
[2026-01-09 14:49:18] 2026-01-09 19:48:16,913 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:49:18] 2026-01-09 19:48:16,928 | INFO     | cat /etc/os-release:
[2026-01-09 14:49:18] NAME="CentOS Linux"
[2026-01-09 14:49:18] VERSION="7 (Core)"
[2026-01-09 14:49:18] ID="centos"
[2026-01-09 14:49:18] ID_LIKE="rhel fedora"
[2026-01-09 14:49:18] VERSION_ID="7"
[2026-01-09 14:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:49:18] ANSI_COLOR="0;31"
[2026-01-09 14:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:49:18] HOME_URL="https://www.centos.org/"
[2026-01-09 14:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:49:18] 
[2026-01-09 14:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:49:18] 
[2026-01-09 14:49:18] 2026-01-09 19:48:16,928 | INFO     | ***************************************
[2026-01-09 14:49:18] 2026-01-09 19:48:17,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 14:49:18] 2026-01-09 19:48:17,441 | INFO     | sufficient remaining disk space (127874891776 B)
[2026-01-09 14:49:18] 2026-01-09 19:48:17,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:49:18] 2026-01-09 19:48:17,441 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:49:18] 2026-01-09 19:48:17,441 | INFO     | update_server=False
[2026-01-09 14:49:18] 2026-01-09 19:48:17,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:49:18] 2026-01-09 19:48:17,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:49:18] 2026-01-09 19:48:17,531 | INFO     | all payload control threads have been joined
[2026-01-09 14:49:18] 2026-01-09 19:48:17,622 | INFO     | all data control threads have been joined
[2026-01-09 14:49:18] 2026-01-09 19:48:17,631 | INFO     | all job control threads have been joined
[2026-01-09 14:49:18] 2026-01-09 19:48:18,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:49:18] 2026-01-09 19:48:18,111 | INFO     | aborting loop
[2026-01-09 14:49:18] 2026-01-09 19:48:18,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:49:18] 2026-01-09 19:48:18,447 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,536 | INFO     | [payload] control thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,627 | INFO     | [data] control thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,638 | INFO     | [job] control thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,645 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,655 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:18,961 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:19,134 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:19,161 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:19,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:19,690 | INFO     | [job] validate thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:20,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:49:18] 2026-01-09 19:48:20,447 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:21,334 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:21,461 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:28,050 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:49:18] 2026-01-09 19:48:29,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:49:18] 2026-01-09 19:48:46,168 | INFO     | 7820s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 14:49:18] 2026-01-09 19:48:47,765 | INFO     | PID=1102877 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:49:18] 2026-01-09 19:48:47,766 | INFO     | .. there are 16 such processes running
[2026-01-09 14:49:18] 2026-01-09 19:48:47,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:49:18] 2026-01-09 19:48:47,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:49:18] 2026-01-09 19:48:47,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:49:18] 2026-01-09 19:49:11,511 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:49:18] 2026-01-09 19:49:12,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785914853184)>', '<ExcThread(monitor, started 139785632974592)>']
[2026-01-09 14:49:18] 2026-01-09 19:49:12,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:49:18] 2026-01-09 19:49:12,917 | INFO     | [monitor] control thread has ended
[2026-01-09 14:49:18] 2026-01-09 19:49:17,578 | INFO     | all workflow threads have been joined
[2026-01-09 14:49:18] 2026-01-09 19:49:17,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:49:18] 2026-01-09 19:49:17,578 | INFO     | traces error code: 0
[2026-01-09 14:49:18] 2026-01-09 19:49:17,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:49:18] 2026-01-09 19:49:17,908 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:49:18] 2026-01-09 19:49:17,911 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:49:18] 2026-01-09 19:49:17,913 [wrapper] pilotpid: 1102877
[2026-01-09 14:49:18] 2026-01-09 19:49:17,916 [wrapper] Pilot exit status: 0
[2026-01-09 14:49:18] 2026-01-09 19:49:17,945 [wrapper] pandaids: 6963186488
[2026-01-09 14:49:18] 2026-01-09 19:49:18,078 [wrapper] cleanup supervisor_pilot 1289169 1102878
[2026-01-09 14:49:18] 2026-01-09 19:49:18,097 [wrapper] Test setup, not cleaning
[2026-01-09 14:49:18] 2026-01-09 19:49:18,107 [wrapper] apfmon messages muted
[2026-01-09 14:49:18] 2026-01-09 19:49:18,130 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:49:18] 2026-01-09 19:49:18,182 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:49:18]  *** Error codes and diagnostics ***
[2026-01-09 14:49:18]     "exeErrorCode": 0,
[2026-01-09 14:49:18]     "exeErrorDiag": "",
[2026-01-09 14:49:18]     "pilotErrorCode": 0,
[2026-01-09 14:49:18]     "pilotErrorDiag": "",
[2026-01-09 14:49:18]  *** Listing of results directory ***
[2026-01-09 14:49:18] total 447360
[2026-01-09 14:49:18] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:49:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:37 run_atlas
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:37 job.xml
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas 225825360 Jan  9 12:37 EVNT.47898824._001397.pool.root.1
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:37 start_atlas.sh
[2026-01-09 14:49:18] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:37 shared
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 12:37 input.tar.gz
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:37 boinc_lockfile
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:37 pandaJob.out
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas        57 Jan  9 12:37 setup.sh.local
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas    989356 Jan  9 12:37 agis_schedconf.cvmfs.json
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:49:18] drwx------. 5 boincer umatlas      4096 Jan  9 12:37 pilot3
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas      6953 Jan  9 14:47 init_data.xml
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas 225378583 Jan  9 14:47 HITS.47898826._036464.pool.root.1
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:47 boinc_task_state.xml
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas      1025 Jan  9 14:48 memory_monitor_summary.json
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas        95 Jan  9 14:48 pilot_heartbeat.json
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas    377726 Jan  9 14:48 log.47898826._036464.job.log.tgz.1
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas      7766 Jan  9 14:48 heartbeat.json
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:49 boinc_mmap_file
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas        27 Jan  9 14:49 wrapper_checkpoint.txt
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas      5012 Jan  9 14:49 pilotlog.txt
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas   1103646 Jan  9 14:49 log.47898826._036464.job.log.1
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas       357 Jan  9 14:49 output.list
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:49 runtime_log
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas   1505280 Jan  9 14:49 result.tar.gz
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 14:49 runtime_log.err
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas       651 Jan  9 14:49 79JKDma3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKogKDmRf3jQo.diag
[2026-01-09 14:49:18] -rw-r--r--. 1 boincer umatlas     21064 Jan  9 14:49 stderr.txt
[2026-01-09 14:49:18] HITS file was successfully produced:
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas 225378583 Jan  9 14:47 shared/HITS.pool.root.1
[2026-01-09 14:49:18]  *** Contents of shared directory: ***
[2026-01-09 14:49:18] total 442712
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas 225825360 Jan  9 12:37 ATLAS.root_0
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:37 start_atlas.sh
[2026-01-09 14:49:18] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 12:37 input.tar.gz
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas 225378583 Jan  9 14:47 HITS.pool.root.1
[2026-01-09 14:49:18] -rw-------. 1 boincer umatlas   1505280 Jan  9 14:49 result.tar.gz
14:49:20 (1098872): run_atlas exited; CPU time 45963.862952
14:49:20 (1098872): called boinc_finish(0)

</stderr_txt>
]]>

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