Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:14 (2508923): wrapper (7.7.26015): starting
15:01:14 (2508923): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:01:14] Arguments: --nthreads 8
[2026-01-09 15:01:14] Threads: 8
[2026-01-09 15:01:14] Checking for CVMFS
[2026-01-09 15:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:01:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:01:14] 2.13.3.0 7345 23333 173944 154955 1 332 39758781 40960001 21177 16776704 0 40701407 99.781 21905830 44061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 15:01:14] CVMFS is ok
[2026-01-09 15:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:01:14] Further information can be found at the LHC@home message board.
[2026-01-09 15:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:01:14] Checking for apptainer binary...
[2026-01-09 15:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:01:14] Running /usr/bin/apptainer --version
[2026-01-09 15:01:14] apptainer version 1.4.5-2.el9
[2026-01-09 15:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:01:15] c-212-14.aglt2.org
[2026-01-09 15:01:15] apptainer works
[2026-01-09 15:01:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:01:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:01:15] Starting ATLAS job with PandaID=6963187031
[2026-01-09 15:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:54:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:54:58] 2026-01-09 22:54:13,176 | INFO     | time since job start (10359s) is within the limit (349056.0s)
[2026-01-09 17:54:58] 2026-01-09 22:54:14,896 | INFO     | monitor loop #698: job 0:6963187031 is in state 'finished'
[2026-01-09 17:54:58] 2026-01-09 22:54:14,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:54:58] 2026-01-09 22:54:15,183 | INFO     | time since job start (10361s) is within the limit (349056.0s)
[2026-01-09 17:54:58] 2026-01-09 22:54:17,190 | INFO     | time since job start (10363s) is within the limit (349056.0s)
[2026-01-09 17:54:58] 2026-01-09 22:54:17,417 | INFO     | monitor loop #699: job 0:6963187031 is in state 'finished'
[2026-01-09 17:54:58] 2026-01-09 22:54:17,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,343 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:54:58] 2026-01-09 22:54:18,391 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3275.3505625
[2026-01-09 17:54:58] 2026-01-09 22:54:18,500 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963187031/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,501 | INFO     | extracted standard info from prmon json
[2026-01-09 17:54:58] 2026-01-09 22:54:18,502 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:54:58] 2026-01-09 22:54:18,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:54:58] 2026-01-09 22:54:18,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:54:58] 2026-01-09 22:54:18,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:54:58] 2026-01-09 22:54:18,505 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:54:58] 2026-01-09 22:54:18,506 | INFO     | sum of square deviations: 1496716023.408283
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | sum of deviations: 28384040279.615395
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | mean x: 1767994060.0591717
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | mean y: 2475669.5384615385
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | intersect: -33526138863.875355
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | chi2: 1.4443140915936108
[2026-01-09 17:54:58] 2026-01-09 22:54:18,507 | INFO     | sum of square deviations: 1367757386.5060978
[2026-01-09 17:54:58] 2026-01-09 22:54:18,508 | INFO     | sum of deviations: 27326783787.542667
[2026-01-09 17:54:58] 2026-01-09 22:54:18,508 | INFO     | mean x: 1767993907.554878
[2026-01-09 17:54:58] 2026-01-09 22:54:18,508 | INFO     | mean y: 2474418.8841463416
[2026-01-09 17:54:58] 2026-01-09 22:54:18,508 | INFO     | intersect: -35320739863.19018
[2026-01-09 17:54:58] 2026-01-09 22:54:18,508 | INFO     | chi2: 1.445382260384125
[2026-01-09 17:54:58] 2026-01-09 22:54:18,509 | INFO     | current chi2=1.445382260384125 (change=-0.07395682121578674 %)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,509 | INFO     | right removable region: 163
[2026-01-09 17:54:58] 2026-01-09 22:54:18,509 | INFO     | sum of square deviations: 1367761718.3902426
[2026-01-09 17:54:58] 2026-01-09 22:54:18,509 | INFO     | sum of deviations: 3212145415.6585364
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | mean x: 1767994212.5609756
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | mean y: 2505063.3841463416
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | intersect: -4149573788.0932894
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | chi2: 0.06250500057203376
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | current chi2=0.06250500057203376 (change=95.67234018307835 %)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,510 | INFO     | sum of square deviations: 1246435463.3710754
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | sum of deviations: 1785096724.1886787
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | mean x: 1767994365.0628932
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | mean y: 2506803.9811320757
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | intersect: -2529546432.7922115
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | chi2: 0.05071502492997104
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | current chi2=0.05071502492997104 (change=18.86245185851232 %)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | left removable region: 20
[2026-01-09 17:54:58] 2026-01-09 22:54:18,511 | INFO     | sum of square deviations: 906741102.4335685
[2026-01-09 17:54:58] 2026-01-09 22:54:18,512 | INFO     | sum of deviations: 4475896986.699303
[2026-01-09 17:54:58] 2026-01-09 22:54:18,512 | INFO     | mean x: 1767994487.062937
[2026-01-09 17:54:58] 2026-01-09 22:54:18,512 | INFO     | mean y: 2502269.811188811
[2026-01-09 17:54:58] 2026-01-09 22:54:18,512 | INFO     | intersect: -8724753146.213964
[2026-01-09 17:54:58] 2026-01-09 22:54:18,512 | INFO     | chi2: 0.0007829443720970087
[2026-01-09 17:54:58] 2026-01-09 22:54:18,513 | INFO     | current memory leak: 4.94 B/s (using 143 data points, chi2=0.00)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,513 | INFO     | could have reported an average CPU frequency of 3228 MHz (9 samples)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | ..............................
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . Timing measurements:
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . get job = 0 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . initial setup = 2 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . payload setup = 11 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . stage-in = 0 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . payload execution = 10304 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . stage-out = 2 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | . log creation = 0 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,514 | INFO     | ..............................
[2026-01-09 17:54:58] 2026-01-09 22:54:18,762 | INFO     | 
[2026-01-09 17:54:58] 2026-01-09 22:54:18,762 | INFO     | job summary report
[2026-01-09 17:54:58] 2026-01-09 22:54:18,762 | INFO     | --------------------------------------------------
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | PanDA job id: 6963187031
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | task id: 47898826
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | errors: (none)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | pilot state: finished 
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | transexitcode: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | exeerrorcode: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | exeerrordiag: 
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | exitcode: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | exitmsg: OK
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | cpuconsumptiontime: 45332 s
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | nevents: 400
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | neventsw: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:18,763 | INFO     | pid: 2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | pgrp: 2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | corecount: 8
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | event service: False
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | sizes: {0: 2283799, 1: 2283998, 8: 2284260, 11: 2284288, 10320: 2313235, 10322: 2322233, 10323: 2322417, 10344: 2322675}
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | --------------------------------------------------
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | 
[2026-01-09 17:54:58] 2026-01-09 22:54:18,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | job 6963187031 has completed (purged errors)
[2026-01-09 17:54:58] 2026-01-09 22:54:18,946 | INFO     | overall cleanup function is called
[2026-01-09 17:54:58] 2026-01-09 22:54:19,686 | INFO     | PID=2512691 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:54:58] 2026-01-09 22:54:19,686 | INFO     | .. there are 17 such processes running
[2026-01-09 17:54:58] 2026-01-09 22:54:19,973 | INFO     | --- collectZombieJob: --- 10, [2519470]
[2026-01-09 17:54:58] 2026-01-09 22:54:19,973 | INFO     | zombie collector waiting for pid 2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:19,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:54:58] 2026-01-09 22:54:19,974 | INFO     | collected zombie processes
[2026-01-09 17:54:58] 2026-01-09 22:54:19,974 | INFO     | will attempt to kill all subprocesses of pid=2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:20,826 | INFO     | process IDs to be killed: [2519470] (in reverse order)
[2026-01-09 17:54:58] 2026-01-09 22:54:20,949 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:54:58] 2026-01-09 22:54:20,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:54:58] 2026-01-09 22:54:20,963 | INFO     | did not find any defunct processes belonging to 2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:20,976 | INFO     | did not find any defunct processes belonging to 2519470
[2026-01-09 17:54:58] 2026-01-09 22:54:20,976 | INFO     | ready for new job
[2026-01-09 17:54:58] 2026-01-09 22:54:20,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:54:58] 2026-01-09 22:54:20,979 | INFO     | ***************************************
[2026-01-09 17:54:58] 2026-01-09 22:54:20,979 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:54:58] 2026-01-09 22:54:20,979 | INFO     | ***************************************
[2026-01-09 17:54:58] 2026-01-09 22:54:20,979 | INFO     | 
[2026-01-09 17:54:58] 2026-01-09 22:54:20,998 | INFO     | architecture information:
[2026-01-09 17:54:58] 2026-01-09 22:54:21,003 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:54:58] 2026-01-09 22:54:21,043 | INFO     | cat /etc/os-release:
[2026-01-09 17:54:58] NAME="CentOS Linux"
[2026-01-09 17:54:58] VERSION="7 (Core)"
[2026-01-09 17:54:58] ID="centos"
[2026-01-09 17:54:58] ID_LIKE="rhel fedora"
[2026-01-09 17:54:58] VERSION_ID="7"
[2026-01-09 17:54:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:54:58] ANSI_COLOR="0;31"
[2026-01-09 17:54:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:54:58] HOME_URL="https://www.centos.org/"
[2026-01-09 17:54:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:54:58] 
[2026-01-09 17:54:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:54:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:54:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:54:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:54:58] 
[2026-01-09 17:54:58] 2026-01-09 22:54:21,044 | INFO     | ***************************************
[2026-01-09 17:54:58] 2026-01-09 22:54:21,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 17:54:58] 2026-01-09 22:54:21,627 | INFO     | sufficient remaining disk space (126790664192 B)
[2026-01-09 17:54:58] 2026-01-09 22:54:21,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:54:58] 2026-01-09 22:54:21,627 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:54:58] 2026-01-09 22:54:21,627 | INFO     | update_server=False
[2026-01-09 17:54:58] 2026-01-09 22:54:21,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:54:58] 2026-01-09 22:54:21,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:54:58] 2026-01-09 22:54:21,629 | INFO     | aborting loop
[2026-01-09 17:54:58] 2026-01-09 22:54:21,748 | INFO     | all job control threads have been joined
[2026-01-09 17:54:58] 2026-01-09 22:54:22,106 | INFO     | all payload control threads have been joined
[2026-01-09 17:54:58] 2026-01-09 22:54:22,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:54:58] 2026-01-09 22:54:22,521 | INFO     | all data control threads have been joined
[2026-01-09 17:54:58] 2026-01-09 22:54:22,634 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:22,638 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:22,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:54:58] 2026-01-09 22:54:22,694 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:22,755 | INFO     | [job] control thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:22,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,035 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,115 | INFO     | [payload] control thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,527 | INFO     | [data] control thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,549 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,666 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:54:58] 2026-01-09 22:54:23,876 | INFO     | [job] validate thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:23,946 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:24,668 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:24,781 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:26,356 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:54:58] 2026-01-09 22:54:52,206 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:54:58] 2026-01-09 22:54:52,585 | INFO     | PID=2512691 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:54:58] 2026-01-09 22:54:52,586 | INFO     | .. there are 17 such processes running
[2026-01-09 17:54:58] 2026-01-09 22:54:52,609 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:54:58] 2026-01-09 22:54:52,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:54:58] 2026-01-09 22:54:52,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:54:58] 2026-01-09 22:54:52,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846966515520)>', '<ExcThread(monitor, started 139846609790720)>']
[2026-01-09 17:54:58] 2026-01-09 22:54:53,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:54:58] 2026-01-09 22:54:53,616 | INFO     | [monitor] control thread has ended
[2026-01-09 17:54:58] 2026-01-09 22:54:57,923 | INFO     | all workflow threads have been joined
[2026-01-09 17:54:58] 2026-01-09 22:54:57,924 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:54:58] 2026-01-09 22:54:57,924 | INFO     | traces error code: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:57,925 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:54:58] 2026-01-09 22:54:58,132 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:54:58] 2026-01-09 22:54:58,134 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:54:58] 2026-01-09 22:54:58,136 [wrapper] pilotpid: 2512691
[2026-01-09 17:54:58] 2026-01-09 22:54:58,139 [wrapper] Pilot exit status: 0
[2026-01-09 17:54:58] 2026-01-09 22:54:58,156 [wrapper] pandaids: 6963187031
[2026-01-09 17:54:58] 2026-01-09 22:54:58,248 [wrapper] cleanup supervisor_pilot 2891136 2512692
[2026-01-09 17:54:58] 2026-01-09 22:54:58,251 [wrapper] Test setup, not cleaning
[2026-01-09 17:54:58] 2026-01-09 22:54:58,253 [wrapper] apfmon messages muted
[2026-01-09 17:54:58] 2026-01-09 22:54:58,255 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:54:58] 2026-01-09 22:54:58,265 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:54:58]  *** Error codes and diagnostics ***
[2026-01-09 17:54:58]     "exeErrorCode": 0,
[2026-01-09 17:54:58]     "exeErrorDiag": "",
[2026-01-09 17:54:58]     "pilotErrorCode": 0,
[2026-01-09 17:54:58]     "pilotErrorDiag": "",
[2026-01-09 17:54:58]  *** Listing of results directory ***
[2026-01-09 17:54:58] total 441592
[2026-01-09 17:54:58] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:54:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:01 run_atlas
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:01 job.xml
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 15:01 EVNT.47898824._001416.pool.root.1
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 17:54:58] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:01 shared
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:01 input.tar.gz
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:01 boinc_lockfile
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 15:01 pandaJob.out
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas        57 Jan  9 15:01 setup.sh.local
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas    989364 Jan  9 15:01 agis_schedconf.cvmfs.json
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:54:58] drwx------. 5 boincer umatlas      4096 Jan  9 15:01 pilot3
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas      6956 Jan  9 17:47 init_data.xml
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas 217472864 Jan  9 17:53 HITS.47898826._036939.pool.root.1
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas       529 Jan  9 17:53 boinc_task_state.xml
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas      1032 Jan  9 17:53 memory_monitor_summary.json
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas    408352 Jan  9 17:53 log.47898826._036939.job.log.tgz.1
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas      7772 Jan  9 17:54 heartbeat.json
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas        95 Jan  9 17:54 pilot_heartbeat.json
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas        27 Jan  9 17:54 wrapper_checkpoint.txt
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 17:54 boinc_mmap_file
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas      4825 Jan  9 17:54 pilotlog.txt
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas   1407735 Jan  9 17:54 log.47898826._036939.job.log.1
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas       357 Jan  9 17:54 output.list
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas       620 Jan  9 17:54 runtime_log
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas   1832960 Jan  9 17:54 result.tar.gz
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas       656 Jan  9 17:54 UmMLDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm13lKDm7hVqIn.diag
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 17:54 runtime_log.err
[2026-01-09 17:54:58] -rw-r--r--. 1 boincer umatlas     21482 Jan  9 17:54 stderr.txt
[2026-01-09 17:54:58] HITS file was successfully produced:
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas 217472864 Jan  9 17:53 shared/HITS.pool.root.1
[2026-01-09 17:54:58]  *** Contents of shared directory: ***
[2026-01-09 17:54:58] total 436620
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 15:01 ATLAS.root_0
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 17:54:58] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:01 input.tar.gz
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas 217472864 Jan  9 17:53 HITS.pool.root.1
[2026-01-09 17:54:58] -rw-------. 1 boincer umatlas   1832960 Jan  9 17:54 result.tar.gz
17:55:00 (2508923): run_atlas exited; CPU time 45639.156488
17:55:00 (2508923): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN