Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:10:46 (3999): wrapper (7.7.26015): starting
12:10:46 (3999): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 12:10:46] Arguments: --nthreads 12
[2026-01-09 12:10:46] Threads: 12
[2026-01-09 12:10:46] Checking for CVMFS
[2026-01-09 12:10:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:10:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:10:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:10:46] 2.11.2.0 2924 351278 100072 154950 3 57 12842540 20275200 1 130560 4 150673976 99.953 21365288 16051 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:10:46] CVMFS is ok
[2026-01-09 12:10:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:10:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:10:46] Further information can be found at the LHC@home message board.
[2026-01-09 12:10:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:10:46] Checking for apptainer binary...
[2026-01-09 12:10:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:10:46] Running /usr/bin/apptainer --version
[2026-01-09 12:10:46] apptainer version 1.3.2-1.el7
[2026-01-09 12:10:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:10:48] c-205-28.aglt2.org
[2026-01-09 12:10:48] apptainer works
[2026-01-09 12:10:48] Set ATHENA_PROC_NUMBER=12
[2026-01-09 12:10:48] Set ATHENA_CORE_NUMBER=12
[2026-01-09 12:10:48] Starting ATLAS job with PandaID=6963167667
[2026-01-09 12:10:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:52:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:52:18]  is_tar=False
[2026-01-09 13:52:18]  lfn=log.47898826._035908.job.log.tgz.1
[2026-01-09 13:52:18]  mtime=0
[2026-01-09 13:52:18]  protocol_id=None
[2026-01-09 13:52:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 13:52:18]  replicas=None
[2026-01-09 13:52:18]  scope=mc23_13p6TeV
[2026-01-09 13:52:18]  status=None
[2026-01-09 13:52:18]  status_code=0
[2026-01-09 13:52:18]  storage_token=
[2026-01-09 13:52:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963167667/log.47898826._035908.job.log.tgz.1
[2026-01-09 13:52:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/dd/log.47898826._035908.job.log.tgz.1
[2026-01-09 13:52:18]  workdir=None
[2026-01-09 13:52:18] ]
[2026-01-09 13:52:18] 2026-01-09 18:51:31,721 | INFO     | transferring file log.47898826._035908.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963167667/log.47898826._035908.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 13:52:18] 2026-01-09 18:51:31,721 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963167667/log.47898826._035908.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._035908.job
[2026-01-09 13:52:18] 2026-01-09 18:51:31,743 | INFO     | adding to output.list: log.47898826._035908.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/dd/log.47898826._035908.job.log.tg
[2026-01-09 13:52:18] 2026-01-09 18:51:31,744 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 13:52:18] 2026-01-09 18:51:31,744 | INFO     | summary of transferred files:
[2026-01-09 13:52:18] 2026-01-09 18:51:31,744 | INFO     |  -- lfn=log.47898826._035908.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 13:52:18] 2026-01-09 18:51:31,745 | INFO     | stage-out finished correctly
[2026-01-09 13:52:18] 2026-01-09 18:51:31,827 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 13:52:18] 2026-01-09 18:51:33,293 | INFO     | time since job start (6030s) is within the limit (349056.0s)
[2026-01-09 13:52:18] 2026-01-09 18:51:34,363 | INFO     | job 6963167667 has state=finished
[2026-01-09 13:52:18] 2026-01-09 18:51:34,363 | INFO     | preparing for final server update for job 6963167667 in state='finished'
[2026-01-09 13:52:18] 2026-01-09 18:51:34,364 | INFO     | this job has now completed (state=finished)
[2026-01-09 13:52:18] 2026-01-09 18:51:34,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 13:52:18] 2026-01-09 18:51:34,364 | INFO     | log transfer has been attempted: DONE
[2026-01-09 13:52:18] 2026-01-09 18:51:34,364 | INFO     | job 6963167667 has finished - writing final server update
[2026-01-09 13:52:18] 2026-01-09 18:51:34,365 | INFO     | total number of processed events: 400 (read)
[2026-01-09 13:52:18] 2026-01-09 18:51:34,366 | INFO     | executing command: lscpu
[2026-01-09 13:52:18] 2026-01-09 18:51:34,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 13:52:18] 2026-01-09 18:51:35,298 | INFO     | time since job start (6032s) is within the limit (349056.0s)
[2026-01-09 13:52:18] 2026-01-09 18:51:36,628 | WARNING  | process 14086 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 13:52:18] 2026-01-09 18:51:36,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167667/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:52:18] 2026-01-09 18:51:36,718 | INFO     | number of running child processes to parent process 14086: 1
[2026-01-09 13:52:18] 2026-01-09 18:51:36,718 | INFO     | maximum number of monitored processes: 6
[2026-01-09 13:52:18] 2026-01-09 18:51:37,304 | INFO     | time since job start (6034s) is within the limit (349056.0s)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,097 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 13:52:18] 2026-01-09 18:51:39,101 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 13:52:18] 2026-01-09 18:51:39,103 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167667/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,104 | INFO     | extracted standard info from prmon json
[2026-01-09 13:52:18] 2026-01-09 18:51:39,104 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:52:18] 2026-01-09 18:51:39,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:52:18] 2026-01-09 18:51:39,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:52:18] 2026-01-09 18:51:39,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:52:18] 2026-01-09 18:51:39,106 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:52:18] 2026-01-09 18:51:39,106 | INFO     | sum of square deviations: 241429643.0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | sum of deviations: 2685103612.0000005
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | mean x: 1767981772.5
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | mean y: 2691634.8695652173
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | intersect: -19660238667.727592
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | chi2: 0.07368677345064265
[2026-01-09 13:52:18] 2026-01-09 18:51:39,107 | INFO     | current memory leak: 11.12 B/s (using 92 data points, chi2=0.07)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | could have reported an average CPU frequency of 2117 MHz (7 samples)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | ..............................
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . Timing measurements:
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . get job = 0 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . initial setup = 2 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . payload setup = 7 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . stage-in = 0 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,108 | INFO     | . payload execution = 6000 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,109 | INFO     | . stage-out = 0 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,109 | INFO     | . log creation = 0 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,109 | INFO     | ..............................
[2026-01-09 13:52:18] 2026-01-09 18:51:39,190 | INFO     | 
[2026-01-09 13:52:18] 2026-01-09 18:51:39,190 | INFO     | job summary report
[2026-01-09 13:52:18] 2026-01-09 18:51:39,190 | INFO     | --------------------------------------------------
[2026-01-09 13:52:18] 2026-01-09 18:51:39,190 | INFO     | PanDA job id: 6963167667
[2026-01-09 13:52:18] 2026-01-09 18:51:39,190 | INFO     | task id: 47898826
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | errors: (none)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | pilot state: finished 
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | transexitcode: 0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | exeerrorcode: 0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,191 | INFO     | exeerrordiag: 
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | exitcode: 0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | exitmsg: OK
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | cpuconsumptiontime: 64548 s
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | nevents: 400
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | neventsw: 0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | pid: 14086
[2026-01-09 13:52:18] 2026-01-09 18:51:39,192 | INFO     | pgrp: 14086
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | corecount: 12
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | event service: False
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 6011: 2311013, 6012: 2320067, 6019: 2320205}
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | --------------------------------------------------
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | 
[2026-01-09 13:52:18] 2026-01-09 18:51:39,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 13:52:18] 2026-01-09 18:51:39,216 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:52:18] 2026-01-09 18:51:39,220 | INFO     | job 6963167667 has completed (purged errors)
[2026-01-09 13:52:18] 2026-01-09 18:51:39,220 | INFO     | overall cleanup function is called
[2026-01-09 13:52:18] 2026-01-09 18:51:40,228 | INFO     | --- collectZombieJob: --- 10, [14086]
[2026-01-09 13:52:18] 2026-01-09 18:51:40,228 | INFO     | zombie collector waiting for pid 14086
[2026-01-09 13:52:18] 2026-01-09 18:51:40,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:52:18] 2026-01-09 18:51:40,228 | INFO     | collected zombie processes
[2026-01-09 13:52:18] 2026-01-09 18:51:40,228 | INFO     | will attempt to kill all subprocesses of pid=14086
[2026-01-09 13:52:18] 2026-01-09 18:51:40,319 | INFO     | process IDs to be killed: [14086] (in reverse order)
[2026-01-09 13:52:18] 2026-01-09 18:51:40,370 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:52:18] 2026-01-09 18:51:40,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:52:18] 2026-01-09 18:51:40,374 | INFO     | did not find any defunct processes belonging to 14086
[2026-01-09 13:52:18] 2026-01-09 18:51:40,377 | INFO     | did not find any defunct processes belonging to 14086
[2026-01-09 13:52:18] 2026-01-09 18:51:40,377 | INFO     | ready for new job
[2026-01-09 13:52:18] 2026-01-09 18:51:40,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:52:18] 2026-01-09 18:51:40,379 | INFO     | ***************************************
[2026-01-09 13:52:18] 2026-01-09 18:51:40,379 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:52:18] 2026-01-09 18:51:40,379 | INFO     | ***************************************
[2026-01-09 13:52:18] 2026-01-09 18:51:40,379 | INFO     | 
[2026-01-09 13:52:18] 2026-01-09 18:51:40,380 | INFO     | architecture information:
[2026-01-09 13:52:18] 2026-01-09 18:51:40,380 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:52:18] 2026-01-09 18:51:40,395 | INFO     | cat /etc/os-release:
[2026-01-09 13:52:18] NAME="CentOS Linux"
[2026-01-09 13:52:18] VERSION="7 (Core)"
[2026-01-09 13:52:18] ID="centos"
[2026-01-09 13:52:18] ID_LIKE="rhel fedora"
[2026-01-09 13:52:18] VERSION_ID="7"
[2026-01-09 13:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:52:18] ANSI_COLOR="0;31"
[2026-01-09 13:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:52:18] HOME_URL="https://www.centos.org/"
[2026-01-09 13:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:52:18] 
[2026-01-09 13:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:52:18] 
[2026-01-09 13:52:18] 2026-01-09 18:51:40,395 | INFO     | ***************************************
[2026-01-09 13:52:18] 2026-01-09 18:51:40,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 13:52:18] 2026-01-09 18:51:40,983 | INFO     | sufficient remaining disk space (29315039232 B)
[2026-01-09 13:52:18] 2026-01-09 18:51:40,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:52:18] 2026-01-09 18:51:40,984 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:52:18] 2026-01-09 18:51:40,984 | INFO     | update_server=False
[2026-01-09 13:52:18] 2026-01-09 18:51:40,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:52:18] 2026-01-09 18:51:40,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:52:18] 2026-01-09 18:51:40,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:52:18] 2026-01-09 18:51:40,985 | INFO     | aborting loop
[2026-01-09 13:52:18] 2026-01-09 18:51:41,104 | INFO     | all payload control threads have been joined
[2026-01-09 13:52:18] 2026-01-09 18:51:41,115 | INFO     | all job control threads have been joined
[2026-01-09 13:52:18] 2026-01-09 18:51:41,799 | INFO     | all data control threads have been joined
[2026-01-09 13:52:18] 2026-01-09 18:51:41,990 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:41,991 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:41,991 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,031 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,110 | INFO     | [payload] control thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,121 | INFO     | [job] control thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,251 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:52:18] 2026-01-09 18:51:42,345 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,397 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:52:18] 2026-01-09 18:51:42,578 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:42,809 | INFO     | [data] control thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:43,167 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:43,312 | INFO     | [job] validate thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:44,347 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:46,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:51:51,088 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:52:18] 2026-01-09 18:51:52,092 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:52:18] 2026-01-09 18:52:10,508 | INFO     | PID=7680 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 13:52:18] 2026-01-09 18:52:10,509 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:52:18] 2026-01-09 18:52:10,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:52:18] 2026-01-09 18:52:10,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:52:18] 2026-01-09 18:52:12,377 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:52:18] 2026-01-09 18:52:13,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237448447808)>', '<ExcThread(monitor, started 140236629722880)>']
[2026-01-09 13:52:18] 2026-01-09 18:52:13,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:52:18] 2026-01-09 18:52:13,524 | INFO     | [monitor] control thread has ended
[2026-01-09 13:52:18] 2026-01-09 18:52:18,366 | INFO     | all workflow threads have been joined
[2026-01-09 13:52:18] 2026-01-09 18:52:18,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:52:18] 2026-01-09 18:52:18,370 | INFO     | traces error code: 0
[2026-01-09 13:52:18] 2026-01-09 18:52:18,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:52:18] 2026-01-09 18:52:18,464 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:52:18] 2026-01-09 18:52:18,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:52:18] 2026-01-09 18:52:18,471 [wrapper] pilotpid: 7680
[2026-01-09 13:52:18] 2026-01-09 18:52:18,475 [wrapper] Pilot exit status: 0
[2026-01-09 13:52:18] 2026-01-09 18:52:18,490 [wrapper] pandaids: 6963167667
[2026-01-09 13:52:18] 2026-01-09 18:52:18,530 [wrapper] cleanup supervisor_pilot 14058 7681
[2026-01-09 13:52:18] 2026-01-09 18:52:18,534 [wrapper] Test setup, not cleaning
[2026-01-09 13:52:18] 2026-01-09 18:52:18,538 [wrapper] apfmon messages muted
[2026-01-09 13:52:18] 2026-01-09 18:52:18,542 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:52:18] 2026-01-09 18:52:18,546 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:52:18]  *** Error codes and diagnostics ***
[2026-01-09 13:52:18]     "exeErrorCode": 0,
[2026-01-09 13:52:18]     "exeErrorDiag": "",
[2026-01-09 13:52:18]     "pilotErrorCode": 0,
[2026-01-09 13:52:18]     "pilotErrorDiag": "",
[2026-01-09 13:52:18]  *** Listing of results directory ***
[2026-01-09 13:52:18] total 437956
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 13:52:18] -rwx------ 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:03 queuedata.json
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas       100 Jan  9 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:52:18] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 12:10 run_atlas
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas       105 Jan  9 12:10 job.xml
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas 223873151 Jan  9 12:10 EVNT.47898824._001335.pool.root.1
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:10 start_atlas.sh
[2026-01-09 13:52:18] drwxrwx--x 2 boincer umatlas      4096 Jan  9 12:10 shared
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 12:10 input.tar.gz
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas         0 Jan  9 12:10 boinc_lockfile
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 12:10 pandaJob.out
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas        57 Jan  9 12:10 setup.sh.local
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas    989356 Jan  9 12:11 agis_schedconf.cvmfs.json
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas   1516240 Jan  9 12:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:52:18] drwx------ 5 boincer umatlas      4096 Jan  9 12:11 pilot3
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 13:49 init_data.xml
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas 218159430 Jan  9 13:50 HITS.47898826._035908.pool.root.1
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas       529 Jan  9 13:51 boinc_task_state.xml
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas        95 Jan  9 13:51 pilot_heartbeat.json
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas      1047 Jan  9 13:51 memory_monitor_summary.json
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas    400996 Jan  9 13:51 log.47898826._035908.job.log.tgz.1
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas      7852 Jan  9 13:51 heartbeat.json
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 13:52 boinc_mmap_file
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas        27 Jan  9 13:52 wrapper_checkpoint.txt
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas      4817 Jan  9 13:52 pilotlog.txt
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas    857235 Jan  9 13:52 log.47898826._035908.job.log.1
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas       357 Jan  9 13:52 output.list
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas       620 Jan  9 13:52 runtime_log
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas   1280000 Jan  9 13:52 result.tar.gz
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 13:52 runtime_log.err
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas       659 Jan  9 13:52 7gsNDmY1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUmgKDm8CvJQm.diag
[2026-01-09 13:52:18] -rw-r--r-- 1 boincer umatlas     21566 Jan  9 13:52 stderr.txt
[2026-01-09 13:52:18] HITS file was successfully produced:
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas 218159430 Jan  9 13:50 shared/HITS.pool.root.1
[2026-01-09 13:52:18]  *** Contents of shared directory: ***
[2026-01-09 13:52:18] total 433528
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas 223873151 Jan  9 12:10 ATLAS.root_0
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:10 start_atlas.sh
[2026-01-09 13:52:18] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 12:10 input.tar.gz
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas 218159430 Jan  9 13:50 HITS.pool.root.1
[2026-01-09 13:52:18] -rw------- 1 boincer umatlas   1280000 Jan  9 13:52 result.tar.gz
13:52:20 (3999): run_atlas exited; CPU time 64532.933467
13:52:20 (3999): called boinc_finish(0)

</stderr_txt>
]]>

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