Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:55 (2753146): wrapper (7.7.26015): starting
12:21:55 (2753146): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:21:55] Arguments: --nthreads 8
[2026-01-09 12:21:55] Threads: 8
[2026-01-09 12:21:55] Checking for CVMFS
[2026-01-09 12:21:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:21:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:21:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:21:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:21:57] 2.13.3.0 12942 39265 466868 154951 3 191 29657760 32935936 59171 16776704 0 411062497 99.768 232230738 28958 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 12:21:57] CVMFS is ok
[2026-01-09 12:21:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:21:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:21:57] Further information can be found at the LHC@home message board.
[2026-01-09 12:21:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:21:57] Checking for apptainer binary...
[2026-01-09 12:21:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:21:57] Running /usr/bin/apptainer --version
[2026-01-09 12:21:57] apptainer version 1.4.5-2.el9
[2026-01-09 12:21:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:21:58] lc-10-9.aglt2.org
[2026-01-09 12:21:58] apptainer works
[2026-01-09 12:21:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:21:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:21:58] Starting ATLAS job with PandaID=6963168694
[2026-01-09 12:21:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:04:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:04:01] 2026-01-10 01:02:52,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:04:01] 2026-01-10 01:02:53,694 | INFO     | time since job start (27592s) is within the limit (349056.0s)
[2026-01-09 20:04:01] 2026-01-10 01:02:55,402 | INFO     | monitor loop #1341: job 0:6963168694 is in state 'finished'
[2026-01-09 20:04:01] 2026-01-10 01:02:55,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:04:01] 2026-01-10 01:02:55,701 | INFO     | time since job start (27594s) is within the limit (349056.0s)
[2026-01-09 20:04:01] 2026-01-10 01:02:57,876 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 20:04:01] 2026-01-10 01:02:57,902 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2920.5420624999992
[2026-01-09 20:04:01] 2026-01-10 01:02:57,938 | INFO     | monitor loop #1342: job 0:6963168694 is in state 'finished'
[2026-01-09 20:04:01] 2026-01-10 01:02:57,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,031 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963168694/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,032 | INFO     | extracted standard info from prmon json
[2026-01-09 20:04:01] 2026-01-10 01:02:58,032 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:04:01] 2026-01-10 01:02:58,032 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:04:01] 2026-01-10 01:02:58,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:04:01] 2026-01-10 01:02:58,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:04:01] 2026-01-10 01:02:58,059 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:04:01] 2026-01-10 01:02:58,059 | INFO     | sum of square deviations: 28256655334.86453
[2026-01-09 20:04:01] 2026-01-10 01:02:58,081 | INFO     | sum of deviations: 132327168647.3913
[2026-01-09 20:04:01] 2026-01-10 01:02:58,081 | INFO     | mean x: 1767993210.708889
[2026-01-09 20:04:01] 2026-01-10 01:02:58,081 | INFO     | mean y: 2496945.1022222224
[2026-01-09 20:04:01] 2026-01-10 01:02:58,081 | INFO     | intersect: -8277093579.267232
[2026-01-09 20:04:01] 2026-01-10 01:02:58,086 | INFO     | chi2: 3.1680913245557365
[2026-01-09 20:04:01] 2026-01-10 01:02:58,086 | INFO     | sum of square deviations: 27325206531.5639
[2026-01-09 20:04:01] 2026-01-10 01:02:58,093 | INFO     | sum of deviations: 160577061165.88766
[2026-01-09 20:04:01] 2026-01-10 01:02:58,094 | INFO     | mean x: 1767993058.2089887
[2026-01-09 20:04:01] 2026-01-10 01:02:58,094 | INFO     | mean y: 2501525.5280898875
[2026-01-09 20:04:01] 2026-01-10 01:02:58,094 | INFO     | intersect: -10387141060.37339
[2026-01-09 20:04:01] 2026-01-10 01:02:58,094 | INFO     | chi2: 2.390426426226616
[2026-01-09 20:04:01] 2026-01-10 01:02:58,095 | INFO     | current chi2=2.390426426226616 (change=24.54679548854776 %)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,095 | INFO     | right removable region: 444
[2026-01-09 20:04:01] 2026-01-10 01:02:58,095 | INFO     | sum of square deviations: 27325176642.143833
[2026-01-09 20:04:01] 2026-01-10 01:02:58,108 | INFO     | sum of deviations: 31802918119.660686
[2026-01-09 20:04:01] 2026-01-10 01:02:58,108 | INFO     | mean x: 1767993363.211236
[2026-01-09 20:04:01] 2026-01-10 01:02:58,108 | INFO     | mean y: 2513354.9078651685
[2026-01-09 20:04:01] 2026-01-10 01:02:58,108 | INFO     | intersect: -2055198802.0042543
[2026-01-09 20:04:01] 2026-01-10 01:02:58,109 | INFO     | chi2: 1.0317646278661663
[2026-01-09 20:04:01] 2026-01-10 01:02:58,109 | INFO     | current chi2=1.0317646278661663 (change=67.43261092667993 %)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,114 | INFO     | sum of square deviations: 26414396011.918358
[2026-01-09 20:04:01] 2026-01-10 01:02:58,122 | INFO     | sum of deviations: 2593709951.695446
[2026-01-09 20:04:01] 2026-01-10 01:02:58,122 | INFO     | mean x: 1767993515.7136364
[2026-01-09 20:04:01] 2026-01-10 01:02:58,122 | INFO     | mean y: 2518237.934090909
[2026-01-09 20:04:01] 2026-01-10 01:02:58,122 | INFO     | intersect: -171086427.2708373
[2026-01-09 20:04:01] 2026-01-10 01:02:58,123 | INFO     | chi2: 0.8827351221786286
[2026-01-09 20:04:01] 2026-01-10 01:02:58,123 | INFO     | current chi2=0.8827351221786286 (change=14.444137903404538 %)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,123 | INFO     | left removable region: 20
[2026-01-09 20:04:01] 2026-01-10 01:02:58,123 | INFO     | sum of square deviations: 23636349626.03781
[2026-01-09 20:04:01] 2026-01-10 01:02:58,138 | INFO     | sum of deviations: 9507767978.547178
[2026-01-09 20:04:01] 2026-01-10 01:02:58,138 | INFO     | mean x: 1767993637.7169812
[2026-01-09 20:04:01] 2026-01-10 01:02:58,138 | INFO     | mean y: 2526999.771226415
[2026-01-09 20:04:01] 2026-01-10 01:02:58,138 | INFO     | intersect: -708651907.3322254
[2026-01-09 20:04:01] 2026-01-10 01:02:58,139 | INFO     | chi2: 0.024876918781540743
[2026-01-09 20:04:01] 2026-01-10 01:02:58,139 | INFO     | current memory leak: 0.40 B/s (using 424 data points, chi2=0.02)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,140 | INFO     | could have reported an average CPU frequency of 2868 MHz (18 samples)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,140 | INFO     | ..............................
[2026-01-09 20:04:01] 2026-01-10 01:02:58,140 | INFO     | . Timing measurements:
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . get job = 0 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . initial setup = 5 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . payload setup = 38 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . stage-in = 0 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . payload execution = 27449 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . stage-out = 6 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | . log creation = 1 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,147 | INFO     | ..............................
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | 
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | job summary report
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | --------------------------------------------------
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | PanDA job id: 6963168694
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | task id: 47898826
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | errors: (none)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | pilot state: finished 
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | transexitcode: 0
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | exeerrorcode: 0
[2026-01-09 20:04:01] 2026-01-10 01:02:58,797 | INFO     | exeerrordiag: 
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | exitcode: 0
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | exitmsg: OK
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | cpuconsumptiontime: 59973 s
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | nevents: 400
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | neventsw: 0
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | pid: 2797031
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | pgrp: 2797031
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | corecount: 8
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | event service: False
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2284027, 12: 2284027, 24: 2284055, 29: 2284345, 34: 2284501, 27492: 2320846, 27499: 2329844, 27501: 2329900, 27532: 2330094}
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | --------------------------------------------------
[2026-01-09 20:04:01] 2026-01-10 01:02:58,798 | INFO     | 
[2026-01-09 20:04:01] 2026-01-10 01:02:58,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 20:04:01] 2026-01-10 01:02:58,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,861 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,861 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | job 6963168694 has completed (purged errors)
[2026-01-09 20:04:01] 2026-01-10 01:02:58,863 | INFO     | overall cleanup function is called
[2026-01-09 20:04:01] 2026-01-10 01:02:59,907 | INFO     | --- collectZombieJob: --- 10, [2797031]
[2026-01-09 20:04:01] 2026-01-10 01:02:59,907 | INFO     | zombie collector waiting for pid 2797031
[2026-01-09 20:04:01] 2026-01-10 01:02:59,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:04:01] 2026-01-10 01:02:59,907 | INFO     | collected zombie processes
[2026-01-09 20:04:01] 2026-01-10 01:02:59,907 | INFO     | will attempt to kill all subprocesses of pid=2797031
[2026-01-09 20:04:01] 2026-01-10 01:03:01,099 | INFO     | PID=2769021 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:04:01] 2026-01-10 01:03:01,099 | INFO     | .. there are 93 such processes running
[2026-01-09 20:04:01] 2026-01-10 01:03:02,425 | INFO     | process IDs to be killed: [2797031] (in reverse order)
[2026-01-09 20:04:01] 2026-01-10 01:03:03,313 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:04:01] 2026-01-10 01:03:03,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:04:01] 2026-01-10 01:03:03,345 | INFO     | did not find any defunct processes belonging to 2797031
[2026-01-09 20:04:01] 2026-01-10 01:03:03,472 | INFO     | did not find any defunct processes belonging to 2797031
[2026-01-09 20:04:01] 2026-01-10 01:03:03,472 | INFO     | ready for new job
[2026-01-09 20:04:01] 2026-01-10 01:03:03,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:04:01] 2026-01-10 01:03:03,475 | INFO     | ***************************************
[2026-01-09 20:04:01] 2026-01-10 01:03:03,475 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:04:01] 2026-01-10 01:03:03,475 | INFO     | ***************************************
[2026-01-09 20:04:01] 2026-01-10 01:03:03,475 | INFO     | 
[2026-01-09 20:04:01] 2026-01-10 01:03:03,496 | INFO     | architecture information:
[2026-01-09 20:04:01] 2026-01-10 01:03:03,511 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:04:01] 2026-01-10 01:03:03,609 | INFO     | cat /etc/os-release:
[2026-01-09 20:04:01] NAME="CentOS Linux"
[2026-01-09 20:04:01] VERSION="7 (Core)"
[2026-01-09 20:04:01] ID="centos"
[2026-01-09 20:04:01] ID_LIKE="rhel fedora"
[2026-01-09 20:04:01] VERSION_ID="7"
[2026-01-09 20:04:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:04:01] ANSI_COLOR="0;31"
[2026-01-09 20:04:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:04:01] HOME_URL="https://www.centos.org/"
[2026-01-09 20:04:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:04:01] 
[2026-01-09 20:04:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:04:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:04:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:04:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:04:01] 
[2026-01-09 20:04:01] 2026-01-10 01:03:03,609 | INFO     | ***************************************
[2026-01-09 20:04:01] 2026-01-10 01:03:04,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 20:04:01] 2026-01-10 01:03:04,166 | INFO     | sufficient remaining disk space (94165270528 B)
[2026-01-09 20:04:01] 2026-01-10 01:03:04,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | INFO     | update_server=False
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:04:01] 2026-01-10 01:03:04,167 | INFO     | aborting loop
[2026-01-09 20:04:01] 2026-01-10 01:03:04,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:04:01] 2026-01-10 01:03:04,455 | INFO     | all job control threads have been joined
[2026-01-09 20:04:01] 2026-01-10 01:03:04,587 | INFO     | all payload control threads have been joined
[2026-01-09 20:04:01] 2026-01-10 01:03:04,785 | INFO     | all data control threads have been joined
[2026-01-09 20:04:01] 2026-01-10 01:03:05,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:04:01] 2026-01-10 01:03:05,173 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,189 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,189 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,321 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,461 | INFO     | [job] control thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,568 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,593 | INFO     | [payload] control thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,792 | INFO     | [data] control thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,796 | INFO     | [job] validate thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:05,905 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:06,175 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:06,257 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:06,257 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:06,734 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:09,112 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:04:01] 2026-01-10 01:03:35,551 | INFO     | PID=2769021 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:04:01] 2026-01-10 01:03:35,553 | INFO     | .. there are 93 such processes running
[2026-01-09 20:04:01] 2026-01-10 01:03:35,554 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:04:01] 2026-01-10 01:03:35,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:04:01] 2026-01-10 01:03:35,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:04:01] 2026-01-10 01:03:53,497 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:04:01] 2026-01-10 01:03:53,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002624677696)>', '<ExcThread(monitor, started 140002268784384)>']
[2026-01-09 20:04:01] 2026-01-10 01:03:53,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:04:01] 2026-01-10 01:03:53,771 | INFO     | [monitor] control thread has ended
[2026-01-09 20:04:01] 2026-01-10 01:03:58,643 | INFO     | all workflow threads have been joined
[2026-01-09 20:04:01] 2026-01-10 01:03:58,674 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:04:01] 2026-01-10 01:03:58,674 | INFO     | traces error code: 0
[2026-01-09 20:04:01] 2026-01-10 01:03:58,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:04:01] 2026-01-10 01:04:00,143 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:04:01] 2026-01-10 01:04:00,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:04:01] 2026-01-10 01:04:00,194 [wrapper] pilotpid: 2769021
[2026-01-09 20:04:01] 2026-01-10 01:04:00,209 [wrapper] Pilot exit status: 0
[2026-01-09 20:04:01] 2026-01-10 01:04:00,368 [wrapper] pandaids: 6963168694
[2026-01-09 20:04:01] 2026-01-10 01:04:00,787 [wrapper] cleanup supervisor_pilot 3099925 2769022
[2026-01-09 20:04:01] 2026-01-10 01:04:00,804 [wrapper] Test setup, not cleaning
[2026-01-09 20:04:01] 2026-01-10 01:04:00,819 [wrapper] apfmon messages muted
[2026-01-09 20:04:01] 2026-01-10 01:04:00,846 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:04:01] 2026-01-10 01:04:00,867 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:04:01]  *** Error codes and diagnostics ***
[2026-01-09 20:04:01]     "exeErrorCode": 0,
[2026-01-09 20:04:01]     "exeErrorDiag": "",
[2026-01-09 20:04:01]     "pilotErrorCode": 0,
[2026-01-09 20:04:01]     "pilotErrorDiag": "",
[2026-01-09 20:04:01]  *** Listing of results directory ***
[2026-01-09 20:04:01] total 435060
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 20:04:01] -rwx------. 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:03 queuedata.json
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:04:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:21 run_atlas
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:21 job.xml
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas 221518766 Jan  9 12:21 EVNT.47898824._001387.pool.root.1
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:21 start_atlas.sh
[2026-01-09 20:04:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:21 shared
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 12:21 input.tar.gz
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:21 boinc_lockfile
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:21 pandaJob.out
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas        57 Jan  9 12:21 setup.sh.local
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas    989356 Jan  9 12:22 agis_schedconf.cvmfs.json
[2026-01-09 20:04:01] drwx------. 5 boincer umatlas      4096 Jan  9 12:23 pilot3
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas 212811826 Jan  9 20:01 HITS.47898826._036221.pool.root.1
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:01 boinc_task_state.xml
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas      1049 Jan  9 20:02 memory_monitor_summary.json
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas    604294 Jan  9 20:02 log.47898826._036221.job.log.tgz.1
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas        95 Jan  9 20:02 pilot_heartbeat.json
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas      6864 Jan  9 20:02 init_data.xml
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas      7827 Jan  9 20:02 heartbeat.json
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas      4824 Jan  9 20:03 pilotlog.txt
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:03 boinc_mmap_file
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:04 wrapper_checkpoint.txt
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas   3021680 Jan  9 20:04 log.47898826._036221.job.log.1
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas       357 Jan  9 20:04 output.list
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:04 runtime_log
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas   3645440 Jan  9 20:04 result.tar.gz
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 20:04 runtime_log.err
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas       656 Jan  9 20:04 ETrKDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn0lKDmFqwaXm.diag
[2026-01-09 20:04:01] -rw-r--r--. 1 boincer umatlas     21535 Jan  9 20:04 stderr.txt
[2026-01-09 20:04:01] HITS file was successfully produced:
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas 212811826 Jan  9 20:01 shared/HITS.pool.root.1
[2026-01-09 20:04:01]  *** Contents of shared directory: ***
[2026-01-09 20:04:01] total 428320
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas 221518766 Jan  9 12:21 ATLAS.root_0
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:21 start_atlas.sh
[2026-01-09 20:04:01] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 12:21 input.tar.gz
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas 212811826 Jan  9 20:01 HITS.pool.root.1
[2026-01-09 20:04:01] -rw-------. 1 boincer umatlas   3645440 Jan  9 20:04 result.tar.gz
20:04:03 (2753146): run_atlas exited; CPU time 61760.760566
20:04:03 (2753146): called boinc_finish(0)

</stderr_txt>
]]>

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