Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:03:32 (4110771): wrapper (7.7.26015): starting
19:03:32 (4110771): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 19:03:32] Arguments: --nthreads 4
[2026-01-09 19:03:32] Threads: 4
[2026-01-09 19:03:32] Checking for CVMFS
[2026-01-09 19:03:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:03:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:03:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:03:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:03:32] 2.11.0.0 87117 2693 131748 154956 1 188 3294108 4096001 5290 130560 0 11163897 99.998 100343 3693 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 19:03:32] CVMFS is ok
[2026-01-09 19:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:03:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 19:03:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 19:03:32] Further information can be found at the LHC@home message board.
[2026-01-09 19:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:03:32] Checking for apptainer binary...
[2026-01-09 19:03:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:03:32] Running /usr/bin/apptainer --version
[2026-01-09 19:03:32] apptainer version 1.4.5
[2026-01-09 19:03:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:03:32] x32-linux2
[2026-01-09 19:03:32] apptainer works
[2026-01-09 19:03:32] Set ATHENA_PROC_NUMBER=4
[2026-01-09 19:03:32] Set ATHENA_CORE_NUMBER=4
[2026-01-09 19:03:32] Starting ATLAS job with PandaID=6963168778
[2026-01-09 19:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:59:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:59:02] 2026-01-10 02:58:23,056 | INFO     | job 6963168778 has finished - writing final server update
[2026-01-09 21:59:02] 2026-01-10 02:58:23,056 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:59:02] 2026-01-10 02:58:23,056 | INFO     | executing command: lscpu
[2026-01-09 21:59:02] 2026-01-10 02:58:23,081 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:59:02] 2026-01-10 02:58:24,865 | INFO     | time since job start (10486s) is within the limit (349056.0s)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,605 | WARNING  | process 4121417 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 21:59:02] 2026-01-10 02:58:25,605 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6963168778/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,744 | INFO     | number of running child processes to parent process 4121417: 1
[2026-01-09 21:59:02] 2026-01-10 02:58:25,744 | INFO     | maximum number of monitored processes: 6
[2026-01-09 21:59:02] 2026-01-10 02:58:25,748 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:59:02] 2026-01-10 02:58:25,752 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3886.2789375
[2026-01-09 21:59:02] 2026-01-10 02:58:25,756 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6963168778/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,756 | INFO     | extracted standard info from prmon json
[2026-01-09 21:59:02] 2026-01-10 02:58:25,756 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:59:02] 2026-01-10 02:58:25,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:59:02] 2026-01-10 02:58:25,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:59:02] 2026-01-10 02:58:25,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:59:02] 2026-01-10 02:58:25,759 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:59:02] 2026-01-10 02:58:25,759 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | sum of deviations: 9024453094.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | mean x: 1768008652.5
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | mean y: 2315840.418604651
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | intersect: -10110129650.528965
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | chi2: 1.1228421700630027
[2026-01-09 21:59:02] 2026-01-10 02:58:25,760 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | sum of deviations: 8705412297.00001
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | mean x: 1768008500.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | mean y: 2315476.48502994
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | intersect: -10655333897.825296
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | chi2: 1.1235193032933182
[2026-01-09 21:59:02] 2026-01-10 02:58:25,761 | INFO     | current chi2=1.1235193032933182 (change=-0.060305290304290174 %)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,762 | INFO     | right removable region: 166
[2026-01-09 21:59:02] 2026-01-10 02:58:25,762 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,762 | INFO     | sum of deviations: -8301183292.000001
[2026-01-09 21:59:02] 2026-01-10 02:58:25,762 | INFO     | mean x: 1768008805.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,763 | INFO     | mean y: 2335265.1796407187
[2026-01-09 21:59:02] 2026-01-10 02:58:25,763 | INFO     | intersect: 10165106787.293499
[2026-01-09 21:59:02] 2026-01-10 02:58:25,763 | INFO     | chi2: 0.011156878817545127
[2026-01-09 21:59:02] 2026-01-10 02:58:25,763 | INFO     | current chi2=0.011156878817545127 (change=99.00637158854488 %)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,763 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | sum of deviations: -8059888703.0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | mean x: 1768008957.5
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | mean y: 2334968.950617284
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | intersect: 10811859385.218386
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | chi2: 0.010736421252366448
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | current chi2=0.010736421252366448 (change=3.7685948915880867 %)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | left removable region: 20
[2026-01-09 21:59:02] 2026-01-10 02:58:25,764 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | sum of deviations: -6287399655.499999
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | mean x: 1768009079.5
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | mean y: 2332983.8561643837
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | intersect: 11521973885.86063
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | chi2: 0.009956183558154596
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | current memory leak: -6.52 B/s (using 146 data points, chi2=0.01)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,765 | INFO     | could have reported an average CPU frequency of 3856 MHz (9 samples)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | ..............................
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . Timing measurements:
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . get job = 0 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . initial setup = 1 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . payload setup = 2 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . stage-in = 0 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . payload execution = 10460 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . stage-out = 0 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | . log creation = 0 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,766 | INFO     | ..............................
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | 
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | job summary report
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | --------------------------------------------------
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | PanDA job id: 6963168778
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | task id: 47898826
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | errors: (none)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | pilot state: finished 
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | transexitcode: 0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | exeerrorcode: 0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | exeerrordiag: 
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | exitcode: 0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | exitmsg: OK
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | cpuconsumptiontime: 40427 s
[2026-01-09 21:59:02] 2026-01-10 02:58:25,919 | INFO     | nevents: 400
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | neventsw: 0
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | pid: 4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | pgrp: 4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | corecount: 4
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | event service: False
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | sizes: {0: 2283978, 2: 2284240, 11: 2284268, 10466: 2313322, 10467: 2313321, 10468: 2322389, 10471: 2322573, 10474: 2322831}
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | --------------------------------------------------
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | 
[2026-01-09 21:59:02] 2026-01-10 02:58:25,920 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-09 21:59:02] 2026-01-10 02:58:25,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | job 6963168778 has completed (purged errors)
[2026-01-09 21:59:02] 2026-01-10 02:58:25,936 | INFO     | overall cleanup function is called
[2026-01-09 21:59:02] 2026-01-10 02:58:26,943 | INFO     | --- collectZombieJob: --- 10, [4121417]
[2026-01-09 21:59:02] 2026-01-10 02:58:26,944 | INFO     | zombie collector waiting for pid 4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:26,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:59:02] 2026-01-10 02:58:26,944 | INFO     | collected zombie processes
[2026-01-09 21:59:02] 2026-01-10 02:58:26,944 | INFO     | will attempt to kill all subprocesses of pid=4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:27,085 | INFO     | process IDs to be killed: [4121417] (in reverse order)
[2026-01-09 21:59:02] 2026-01-10 02:58:27,134 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:59:02] 2026-01-10 02:58:27,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:59:02] 2026-01-10 02:58:27,138 | INFO     | did not find any defunct processes belonging to 4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:27,141 | INFO     | did not find any defunct processes belonging to 4121417
[2026-01-09 21:59:02] 2026-01-10 02:58:27,141 | INFO     | ready for new job
[2026-01-09 21:59:02] 2026-01-10 02:58:27,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:59:02] 2026-01-10 02:58:27,142 | INFO     | ***************************************
[2026-01-09 21:59:02] 2026-01-10 02:58:27,142 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:59:02] 2026-01-10 02:58:27,142 | INFO     | ***************************************
[2026-01-09 21:59:02] 2026-01-10 02:58:27,142 | INFO     | 
[2026-01-09 21:59:02] 2026-01-10 02:58:27,143 | INFO     | architecture information:
[2026-01-09 21:59:02] 2026-01-10 02:58:27,144 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:59:02] 2026-01-10 02:58:27,154 | INFO     | cat /etc/os-release:
[2026-01-09 21:59:02] NAME="CentOS Linux"
[2026-01-09 21:59:02] VERSION="7 (Core)"
[2026-01-09 21:59:02] ID="centos"
[2026-01-09 21:59:02] ID_LIKE="rhel fedora"
[2026-01-09 21:59:02] VERSION_ID="7"
[2026-01-09 21:59:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:59:02] ANSI_COLOR="0;31"
[2026-01-09 21:59:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:59:02] HOME_URL="https://www.centos.org/"
[2026-01-09 21:59:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:59:02] 
[2026-01-09 21:59:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:59:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:59:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:59:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:59:02] 
[2026-01-09 21:59:02] 2026-01-10 02:58:27,154 | INFO     | ***************************************
[2026-01-09 21:59:02] 2026-01-10 02:58:27,657 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | INFO     | sufficient remaining disk space (413142089728 B)
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | INFO     | update_server=False
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:59:02] 2026-01-10 02:58:27,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:59:02] 2026-01-10 02:58:27,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:59:02] 2026-01-10 02:58:27,669 | INFO     | aborting loop
[2026-01-09 21:59:02] 2026-01-10 02:58:28,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:59:02] 2026-01-10 02:58:28,452 | INFO     | all job control threads have been joined
[2026-01-09 21:59:02] 2026-01-10 02:58:28,567 | INFO     | all data control threads have been joined
[2026-01-09 21:59:02] 2026-01-10 02:58:28,673 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:28,673 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:28,674 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:28,798 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:28,818 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:28,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:59:02] 2026-01-10 02:58:29,097 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,155 | INFO     | all payload control threads have been joined
[2026-01-09 21:59:02] 2026-01-10 02:58:29,457 | INFO     | [job] control thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,488 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,572 | INFO     | [data] control thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,805 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,859 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:29,967 | INFO     | [job] validate thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:30,139 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:30,148 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:30,160 | INFO     | [payload] control thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:32,949 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:59:02] 2026-01-10 02:58:55,834 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:59:02] 2026-01-10 02:58:57,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853218903872)>', '<ExcThread(monitor, started 139852945266432)>']
[2026-01-09 21:59:02] 2026-01-10 02:58:58,094 | INFO     | PID=4114700 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:59:02] 2026-01-10 02:58:58,094 | INFO     | .. there are 8 such processes running
[2026-01-09 21:59:02] 2026-01-10 02:58:58,095 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:59:02] 2026-01-10 02:58:58,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:59:02] 2026-01-10 02:58:58,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:59:02] 2026-01-10 02:58:58,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:59:02] 2026-01-10 02:58:58,095 | INFO     | [monitor] control thread has ended
[2026-01-09 21:59:02] 2026-01-10 02:59:02,215 | INFO     | all workflow threads have been joined
[2026-01-09 21:59:02] 2026-01-10 02:59:02,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:59:02] 2026-01-10 02:59:02,215 | INFO     | traces error code: 0
[2026-01-09 21:59:02] 2026-01-10 02:59:02,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:59:02] 2026-01-10 02:59:02,281 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:59:02] 2026-01-10 02:59:02,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:59:02] 2026-01-10 02:59:02,284 [wrapper] pilotpid: 4114700
[2026-01-09 21:59:02] 2026-01-10 02:59:02,286 [wrapper] Pilot exit status: 0
[2026-01-09 21:59:02] 2026-01-10 02:59:02,292 [wrapper] pandaids: 6963168778
[2026-01-09 21:59:02] 2026-01-10 02:59:02,325 [wrapper] cleanup supervisor_pilot   98594 4114701
[2026-01-09 21:59:02] 2026-01-10 02:59:02,327 [wrapper] Test setup, not cleaning
[2026-01-09 21:59:02] 2026-01-10 02:59:02,329 [wrapper] apfmon messages muted
[2026-01-09 21:59:02] 2026-01-10 02:59:02,330 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:59:02] 2026-01-10 02:59:02,332 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:59:02]  *** Error codes and diagnostics ***
[2026-01-09 21:59:02]     "exeErrorCode": 0,
[2026-01-09 21:59:02]     "exeErrorDiag": "",
[2026-01-09 21:59:02]     "pilotErrorCode": 0,
[2026-01-09 21:59:02]     "pilotErrorDiag": "",
[2026-01-09 21:59:02]  *** Listing of results directory ***
[2026-01-09 21:59:02] total 442588
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 21:59:02] -rwx------ 1 boinc boinc     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:03 queuedata.json
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc       100 Jan  9 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:59:02] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 19:03 run_atlas
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc       105 Jan  9 19:03 job.xml
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:03 start_atlas.sh
[2026-01-09 21:59:02] drwxrwx--x 2 boinc boinc      4096 Jan  9 19:03 shared
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc    592396 Jan  9 19:03 input.tar.gz
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc      9252 Jan  9 19:03 init_data.xml
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc 223708105 Jan  9 19:03 EVNT.47898824._001391.pool.root.1
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:03 boinc_setup_complete
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:03 boinc_lockfile
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc      2520 Jan  9 19:03 pandaJob.out
[2026-01-09 21:59:02] -rw------- 1 boinc boinc    989381 Jan  9 19:03 agis_schedconf.cvmfs.json
[2026-01-09 21:59:02] -rw------- 1 boinc boinc   1516240 Jan  9 19:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:59:02] drwx------ 5 boinc boinc      4096 Jan  9 19:03 pilot3
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc       530 Jan  9 21:57 boinc_task_state.xml
[2026-01-09 21:59:02] -rw------- 1 boinc boinc 221871340 Jan  9 21:57 HITS.47898826._036305.pool.root.1
[2026-01-09 21:59:02] -rw------- 1 boinc boinc      1025 Jan  9 21:58 memory_monitor_summary.json
[2026-01-09 21:59:02] -rw------- 1 boinc boinc    342302 Jan  9 21:58 log.47898826._036305.job.log.tgz.1
[2026-01-09 21:59:02] -rw------- 1 boinc boinc      7757 Jan  9 21:58 heartbeat.json
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc        28 Jan  9 21:58 wrapper_checkpoint.txt
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc      8192 Jan  9 21:58 boinc_mmap_file
[2026-01-09 21:59:02] -rw------- 1 boinc boinc        95 Jan  9 21:58 pilot_heartbeat.json
[2026-01-09 21:59:02] -rw------- 1 boinc boinc      4831 Jan  9 21:59 pilotlog.txt
[2026-01-09 21:59:02] -rw------- 1 boinc boinc   1513323 Jan  9 21:59 log.47898826._036305.job.log.1
[2026-01-09 21:59:02] -rw------- 1 boinc boinc       357 Jan  9 21:59 output.list
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc       620 Jan  9 21:59 runtime_log
[2026-01-09 21:59:02] -rw------- 1 boinc boinc   1873920 Jan  9 21:59 result.tar.gz
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc      8893 Jan  9 21:59 runtime_log.err
[2026-01-09 21:59:02] -rw------- 1 boinc boinc       647 Jan  9 21:59 mKJLDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm90lKDmIKOnam.diag
[2026-01-09 21:59:02] -rw-r--r-- 1 boinc boinc     21469 Jan  9 21:59 stderr.txt
[2026-01-09 21:59:02] HITS file was successfully produced:
[2026-01-09 21:59:02] -rw------- 1 boinc boinc 221871340 Jan  9 21:57 shared/HITS.pool.root.1
[2026-01-09 21:59:02]  *** Contents of shared directory: ***
[2026-01-09 21:59:02] total 437576
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:03 start_atlas.sh
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc    592396 Jan  9 19:03 input.tar.gz
[2026-01-09 21:59:02] -rw-r--r-- 2 boinc boinc 223708105 Jan  9 19:03 ATLAS.root_0
[2026-01-09 21:59:02] -rw------- 1 boinc boinc 221871340 Jan  9 21:57 HITS.pool.root.1
[2026-01-09 21:59:02] -rw------- 1 boinc boinc   1873920 Jan  9 21:59 result.tar.gz
21:59:03 (4110771): run_atlas exited; CPU time 40580.421957
21:59:03 (4110771): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN