Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:12:59 (30268): wrapper (7.7.26015): starting
12:12:59 (30268): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:12:59] Arguments: --nthreads 8
[2026-01-09 12:12:59] Threads: 8
[2026-01-09 12:12:59] Checking for CVMFS
[2026-01-09 12:13:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:13:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:13:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:13:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:13:00] 2.11.2.0 3869 167038 139456 154950 1 188 12337352 18432000 1833 130560 0 116094558 99.987 5968000 33047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:13:00] CVMFS is ok
[2026-01-09 12:13:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:13:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:13:00] Further information can be found at the LHC@home message board.
[2026-01-09 12:13:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:13:00] Checking for apptainer binary...
[2026-01-09 12:13:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:13:00] Running /usr/bin/apptainer --version
[2026-01-09 12:13:00] apptainer version 1.3.2-1.el7
[2026-01-09 12:13:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:13:01] c-206-12.aglt2.org
[2026-01-09 12:13:01] apptainer works
[2026-01-09 12:13:01] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:13:01] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:13:01] Starting ATLAS job with PandaID=6963167495
[2026-01-09 12:13:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:12:50 (14034): wrapper (7.7.26015): starting
15:12:50 (14034): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:12:50] Arguments: --nthreads 8
[2026-01-09 15:12:50] Threads: 8
[2026-01-09 15:12:50] This job has been restarted, cleaning up previous attempt
[2026-01-09 15:12:50] Checking for CVMFS
[2026-01-09 15:12:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:12:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:12:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:12:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:12:51] 2.11.2.0 3869 167218 141276 154955 2 39 12370207 18432001 1 130560 0 116301403 99.987 5976167 33053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 15:12:51] CVMFS is ok
[2026-01-09 15:12:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:12:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:12:51] Further information can be found at the LHC@home message board.
[2026-01-09 15:12:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:12:51] Checking for apptainer binary...
[2026-01-09 15:12:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:12:51] Running /usr/bin/apptainer --version
[2026-01-09 15:12:51] apptainer version 1.3.2-1.el7
[2026-01-09 15:12:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:12:52] c-206-12.aglt2.org
[2026-01-09 15:12:52] apptainer works
[2026-01-09 15:12:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:12:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:12:52] Starting ATLAS job with PandaID=6963167495
[2026-01-09 15:12:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:23:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:23:54] 2026-01-10 00:23:22,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:23:54] 2026-01-10 00:23:22,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:23:54] 2026-01-10 00:23:22,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:23:54] 2026-01-10 00:23:22,073 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:23:54] 2026-01-10 00:23:22,073 | INFO     | sum of square deviations: 4616114457.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,075 | INFO     | sum of deviations: 45345327982.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,075 | INFO     | mean x: 1767997083.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,075 | INFO     | mean y: 2467279.06097561
[2026-01-09 19:23:54] 2026-01-10 00:23:22,075 | INFO     | intersect: -17365041339.17847
[2026-01-09 19:23:54] 2026-01-10 00:23:22,076 | INFO     | chi2: 1.3113692449131882
[2026-01-09 19:23:54] 2026-01-10 00:23:22,076 | INFO     | sum of square deviations: 4340323240.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | sum of deviations: 44115799142.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | mean x: 1767996931.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | mean y: 2466599.257261411
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | intersect: -17967761233.743587
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | chi2: 1.3116442275967752
[2026-01-09 19:23:54] 2026-01-10 00:23:22,078 | INFO     | current chi2=1.3116442275967752 (change=-0.0209691270901552 %)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,079 | INFO     | right removable region: 240
[2026-01-09 19:23:54] 2026-01-10 00:23:22,079 | INFO     | sum of square deviations: 4340323240.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,080 | INFO     | sum of deviations: 9192262508.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,081 | INFO     | mean x: 1767997236.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,081 | INFO     | mean y: 2487106.7510373443
[2026-01-09 19:23:54] 2026-01-10 00:23:22,081 | INFO     | intersect: -3741910213.004905
[2026-01-09 19:23:54] 2026-01-10 00:23:22,081 | INFO     | chi2: 0.0238975585347558
[2026-01-09 19:23:54] 2026-01-10 00:23:22,081 | INFO     | current chi2=0.0238975585347558 (change=98.17766364222322 %)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,082 | INFO     | sum of square deviations: 4075741535.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,083 | INFO     | sum of deviations: 4590784970.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,083 | INFO     | mean x: 1767997388.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,083 | INFO     | mean y: 2489737.6694915253
[2026-01-09 19:23:54] 2026-01-10 00:23:22,083 | INFO     | intersect: -1988926000.6508853
[2026-01-09 19:23:54] 2026-01-10 00:23:22,084 | INFO     | chi2: 0.0027257600205348597
[2026-01-09 19:23:54] 2026-01-10 00:23:22,084 | INFO     | current chi2=0.0027257600205348597 (change=88.59398119447806 %)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,084 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | sum of deviations: 3300831999.9999995
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | mean x: 1767997541.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | mean y: 2490511.0995670995
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | intersect: -1524368205.6766837
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | chi2: 0.001970893510532591
[2026-01-09 19:23:54] 2026-01-10 00:23:22,086 | INFO     | current chi2=0.001970893510532591 (change=27.693799318919705 %)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,087 | INFO     | sum of square deviations: 3579276412.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,088 | INFO     | sum of deviations: 2621377674.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,088 | INFO     | mean x: 1767997693.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,088 | INFO     | mean y: 2490937.030973451
[2026-01-09 19:23:54] 2026-01-10 00:23:22,088 | INFO     | intersect: -1292348898.7869298
[2026-01-09 19:23:54] 2026-01-10 00:23:22,089 | INFO     | chi2: 0.0018052423379775176
[2026-01-09 19:23:54] 2026-01-10 00:23:22,089 | INFO     | current chi2=0.0018052423379775176 (change=8.404876857619255 %)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,089 | INFO     | left removable region: 40
[2026-01-09 19:23:54] 2026-01-10 00:23:22,089 | INFO     | sum of square deviations: 2480604650.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,090 | INFO     | sum of deviations: 2187304511.0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,090 | INFO     | mean x: 1767998120.5
[2026-01-09 19:23:54] 2026-01-10 00:23:22,090 | INFO     | mean y: 2490694.52
[2026-01-09 19:23:54] 2026-01-10 00:23:22,091 | INFO     | intersect: -1556464000.0175483
[2026-01-09 19:23:54] 2026-01-10 00:23:22,091 | INFO     | chi2: 0.0014956983022401708
[2026-01-09 19:23:54] 2026-01-10 00:23:22,091 | INFO     | current memory leak: 0.88 B/s (using 200 data points, chi2=0.00)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,091 | INFO     | could have reported an average CPU frequency of 2398 MHz (12 samples)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | ..............................
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . Timing measurements:
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . get job = 0 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . initial setup = 1 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . payload setup = 6 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . stage-in = 0 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . payload execution = 14978 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . stage-out = 2 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | . log creation = 0 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,092 | INFO     | ..............................
[2026-01-09 19:23:54] 2026-01-10 00:23:22,173 | INFO     | 
[2026-01-09 19:23:54] 2026-01-10 00:23:22,173 | INFO     | job summary report
[2026-01-09 19:23:54] 2026-01-10 00:23:22,173 | INFO     | --------------------------------------------------
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | PanDA job id: 6963167495
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | task id: 47898826
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | errors: (none)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | pilot state: finished 
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | transexitcode: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | exeerrorcode: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | exeerrordiag: 
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | exitcode: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,174 | INFO     | exitmsg: OK
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | cpuconsumptiontime: 114990 s
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | nevents: 400
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | neventsw: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | pid: 12231
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | pgrp: 12231
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | corecount: 8
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | event service: False
[2026-01-09 19:23:54] 2026-01-10 00:23:22,175 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 14989: 2315186, 14992: 2324184, 14996: 2324368, 15002: 2324562}
[2026-01-09 19:23:54] 2026-01-10 00:23:22,176 | INFO     | --------------------------------------------------
[2026-01-09 19:23:54] 2026-01-10 00:23:22,176 | INFO     | 
[2026-01-09 19:23:54] 2026-01-10 00:23:22,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | job 6963167495 has completed (purged errors)
[2026-01-09 19:23:54] 2026-01-10 00:23:22,194 | INFO     | overall cleanup function is called
[2026-01-09 19:23:54] 2026-01-10 00:23:23,200 | INFO     | --- collectZombieJob: --- 10, [12231]
[2026-01-09 19:23:54] 2026-01-10 00:23:23,201 | INFO     | zombie collector waiting for pid 12231
[2026-01-09 19:23:54] 2026-01-10 00:23:23,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:23:54] 2026-01-10 00:23:23,201 | INFO     | collected zombie processes
[2026-01-09 19:23:54] 2026-01-10 00:23:23,201 | INFO     | will attempt to kill all subprocesses of pid=12231
[2026-01-09 19:23:54] 2026-01-10 00:23:23,309 | INFO     | process IDs to be killed: [12231] (in reverse order)
[2026-01-09 19:23:54] 2026-01-10 00:23:23,349 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:23:54] 2026-01-10 00:23:23,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:23:54] 2026-01-10 00:23:23,352 | INFO     | did not find any defunct processes belonging to 12231
[2026-01-09 19:23:54] 2026-01-10 00:23:23,354 | INFO     | did not find any defunct processes belonging to 12231
[2026-01-09 19:23:54] 2026-01-10 00:23:23,355 | INFO     | ready for new job
[2026-01-09 19:23:54] 2026-01-10 00:23:23,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:23:54] 2026-01-10 00:23:23,356 | INFO     | ***************************************
[2026-01-09 19:23:54] 2026-01-10 00:23:23,356 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:23:54] 2026-01-10 00:23:23,356 | INFO     | ***************************************
[2026-01-09 19:23:54] 2026-01-10 00:23:23,357 | INFO     | 
[2026-01-09 19:23:54] 2026-01-10 00:23:23,357 | INFO     | architecture information:
[2026-01-09 19:23:54] 2026-01-10 00:23:23,358 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:23:54] 2026-01-10 00:23:23,370 | INFO     | cat /etc/os-release:
[2026-01-09 19:23:54] NAME="CentOS Linux"
[2026-01-09 19:23:54] VERSION="7 (Core)"
[2026-01-09 19:23:54] ID="centos"
[2026-01-09 19:23:54] ID_LIKE="rhel fedora"
[2026-01-09 19:23:54] VERSION_ID="7"
[2026-01-09 19:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:23:54] ANSI_COLOR="0;31"
[2026-01-09 19:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:23:54] HOME_URL="https://www.centos.org/"
[2026-01-09 19:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:23:54] 
[2026-01-09 19:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:23:54] 
[2026-01-09 19:23:54] 2026-01-10 00:23:23,370 | INFO     | ***************************************
[2026-01-09 19:23:54] 2026-01-10 00:23:23,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 19:23:54] 2026-01-10 00:23:23,890 | INFO     | sufficient remaining disk space (27865907200 B)
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | INFO     | update_server=False
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:23:54] 2026-01-10 00:23:23,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:23:54] 2026-01-10 00:23:23,892 | INFO     | aborting loop
[2026-01-09 19:23:54] 2026-01-10 00:23:23,966 | INFO     | all data control threads have been joined
[2026-01-09 19:23:54] 2026-01-10 00:23:24,689 | INFO     | all payload control threads have been joined
[2026-01-09 19:23:54] 2026-01-10 00:23:24,896 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:24,897 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:24,898 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:24,971 | INFO     | [data] control thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,081 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,089 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:23:54] 2026-01-10 00:23:25,151 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,157 | INFO     | [job] validate thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,386 | INFO     | all job control threads have been joined
[2026-01-09 19:23:54] 2026-01-10 00:23:25,629 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:25,694 | INFO     | [payload] control thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:26,023 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:26,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:26,089 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:26,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:23:54] 2026-01-10 00:23:26,392 | INFO     | [job] control thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:27,104 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:28,349 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:23:54] 2026-01-10 00:23:30,099 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:23:54] 2026-01-10 00:23:31,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784535570240)>', '<ExcThread(monitor, started 139784223692544)>']
[2026-01-09 19:23:54] 2026-01-10 00:23:36,972 | INFO     | all workflow threads have been joined
[2026-01-09 19:23:54] 2026-01-10 00:23:36,972 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:23:54] 2026-01-10 00:23:36,972 | INFO     | traces error code: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:36,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:23:54] 2026-01-10 00:23:54,575 | INFO     | PID=25393 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:23:54] 2026-01-10 00:23:54,575 | INFO     | .. there are 2 such processes running
[2026-01-09 19:23:54] 2026-01-10 00:23:54,576 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:23:54] 2026-01-10 00:23:54,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:23:54] 2026-01-10 00:23:54,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:23:54] 2026-01-10 00:23:54,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:23:54] 2026-01-10 00:23:54,576 | INFO     | [monitor] control thread has ended
[2026-01-09 19:23:54] 2026-01-10 00:23:54,656 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:23:54] 2026-01-10 00:23:54,657 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:23:54] 2026-01-10 00:23:54,659 [wrapper] pilotpid: 25393
[2026-01-09 19:23:54] 2026-01-10 00:23:54,661 [wrapper] Pilot exit status: 0
[2026-01-09 19:23:54] 2026-01-10 00:23:54,668 [wrapper] pandaids: 6963167495 6963167495
[2026-01-09 19:23:54] 2026-01-10 00:23:54,692 [wrapper] cleanup supervisor_pilot  6952 25394
[2026-01-09 19:23:54] 2026-01-10 00:23:54,694 [wrapper] Test setup, not cleaning
[2026-01-09 19:23:54] 2026-01-10 00:23:54,696 [wrapper] apfmon messages muted
[2026-01-09 19:23:54] 2026-01-10 00:23:54,698 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:23:54] 2026-01-10 00:23:54,700 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:23:54]  *** Error codes and diagnostics ***
[2026-01-09 19:23:54]     "exeErrorCode": 0,
[2026-01-09 19:23:54]     "exeErrorDiag": "",
[2026-01-09 19:23:54]     "pilotErrorCode": 0,
[2026-01-09 19:23:54]     "pilotErrorDiag": "",
[2026-01-09 19:23:54]  *** Listing of results directory ***
[2026-01-09 19:23:54] total 654140
[2026-01-09 19:23:54] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 19:23:54] -rwx------ 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:03 queuedata.json
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas       100 Jan  9 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:23:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 12:12 run_atlas
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas       105 Jan  9 12:12 job.xml
[2026-01-09 19:23:54] -rw-r--r-- 3 boincer umatlas 223632102 Jan  9 12:12 EVNT.47898824._001325.pool.root.1
[2026-01-09 19:23:54] -rw-r--r-- 3 boincer umatlas 223632102 Jan  9 12:12 ATLAS.root_0
[2026-01-09 19:23:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:12 start_atlas.sh
[2026-01-09 19:23:54] drwxrwx--x 2 boincer umatlas      4096 Jan  9 12:12 shared
[2026-01-09 19:23:54] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 12:12 input.tar.gz
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas         0 Jan  9 12:12 boinc_lockfile
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 15:12 pandaJob.out
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas        57 Jan  9 15:12 setup.sh.local
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas    989364 Jan  9 15:13 agis_schedconf.cvmfs.json
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 19:21 init_data.xml
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas 213538281 Jan  9 19:22 HITS.47898826._035736.pool.root.1
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas       532 Jan  9 19:23 boinc_task_state.xml
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas      1048 Jan  9 19:23 memory_monitor_summary.json
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas   1516240 Jan  9 19:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas    475008 Jan  9 19:23 log.47898826._035736.job.log.tgz.1
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas      7851 Jan  9 19:23 heartbeat.json
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 19:23 boinc_mmap_file
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas        29 Jan  9 19:23 wrapper_checkpoint.txt
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas       820 Jan  9 19:23 pilotlog.txt
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas        96 Jan  9 19:23 pilot_heartbeat.json
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas   2089428 Jan  9 19:23 log.47898826._035736.job.log.1
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas       357 Jan  9 19:23 output.list
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas       620 Jan  9 19:23 runtime_log
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas   2580480 Jan  9 19:23 result.tar.gz
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas       788 Jan  9 19:23 yM8LDmY1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmulgKDmRMFDkn.diag
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas      9428 Jan  9 19:23 runtime_log.err
[2026-01-09 19:23:54] -rw-r--r-- 1 boincer umatlas     23036 Jan  9 19:23 stderr.txt
[2026-01-09 19:23:54] HITS file was successfully produced:
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas 213538281 Jan  9 19:22 shared/HITS.pool.root.1
[2026-01-09 19:23:54]  *** Contents of shared directory: ***
[2026-01-09 19:23:54] total 430048
[2026-01-09 19:23:54] -rw-r--r-- 3 boincer umatlas 223632102 Jan  9 12:12 ATLAS.root_0
[2026-01-09 19:23:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 12:12 start_atlas.sh
[2026-01-09 19:23:54] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 12:12 input.tar.gz
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas 213538281 Jan  9 19:22 HITS.pool.root.1
[2026-01-09 19:23:54] -rw------- 1 boincer umatlas   2580480 Jan  9 19:23 result.tar.gz
19:23:56 (14034): run_atlas exited; CPU time 115214.335123
19:23:56 (14034): called boinc_finish(0)

</stderr_txt>
]]>

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