Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:40:34 (16089): wrapper (7.7.26015): starting
20:40:34 (16089): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:40:34] Arguments: --nthreads 8
[2026-01-09 20:40:34] Threads: 8
[2026-01-09 20:40:34] Checking for CVMFS
[2026-01-09 20:40:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:40:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:40:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:40:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:40:35] 2.11.2.0 27707 35847 94780 154955 1 56 13952157 25165824 0 130560 0 15873659 99.861 9492335 2939 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:40:35] CVMFS is ok
[2026-01-09 20:40:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:40:35] Checking for apptainer binary...
[2026-01-09 20:40:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:40:35] Running /usr/bin/apptainer --version
[2026-01-09 20:40:35] apptainer version 1.3.2-1.el7
[2026-01-09 20:40:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:40:36] cg-vwn470.simple-grid.lan
[2026-01-09 20:40:36] apptainer works
[2026-01-09 20:40:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:40:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:40:36] Starting ATLAS job with PandaID=6963167686
[2026-01-09 20:40:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:30:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:30:25] 2026-01-09 23:29:11,048 | INFO     | time since job start (13702s) is within the limit (349056.0s)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,078 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:30:25] 2026-01-09 23:29:12,079 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-10 00:30:25] 2026-01-09 23:29:12,081 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963167686/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,082 | INFO     | extracted standard info from prmon json
[2026-01-10 00:30:25] 2026-01-09 23:29:12,082 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:30:25] 2026-01-09 23:29:12,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:30:25] 2026-01-09 23:29:12,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:30:25] 2026-01-09 23:29:12,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:30:25] 2026-01-09 23:29:12,087 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:30:25] 2026-01-09 23:29:12,087 | INFO     | sum of square deviations: 3438620752.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,094 | INFO     | sum of deviations: -29475990803.999992
[2026-01-10 00:30:25] 2026-01-09 23:29:12,095 | INFO     | mean x: 1767994449.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,095 | INFO     | mean y: 2501332.883408072
[2026-01-10 00:30:25] 2026-01-09 23:29:12,095 | INFO     | intersect: 15157818501.819937
[2026-01-10 00:30:25] 2026-01-09 23:29:12,095 | INFO     | chi2: 3.2230392695754304
[2026-01-10 00:30:25] 2026-01-09 23:29:12,096 | INFO     | sum of square deviations: 3212467674.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,097 | INFO     | sum of deviations: 1296527550.0000021
[2026-01-10 00:30:25] 2026-01-09 23:29:12,097 | INFO     | mean x: 1767994296.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,097 | INFO     | mean y: 2521808.5688073393
[2026-01-10 00:30:25] 2026-01-09 23:29:12,104 | INFO     | intersect: -711027258.9753188
[2026-01-10 00:30:25] 2026-01-09 23:29:12,104 | INFO     | chi2: 1.5911275546749992
[2026-01-10 00:30:25] 2026-01-09 23:29:12,104 | INFO     | current chi2=1.5911275546749992 (change=50.632697227899506 %)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,105 | INFO     | sum of square deviations: 2996454322.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,107 | INFO     | sum of deviations: 1416230534.0000222
[2026-01-10 00:30:25] 2026-01-09 23:29:12,107 | INFO     | mean x: 1767994144.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,107 | INFO     | mean y: 2521893.136150235
[2026-01-10 00:30:25] 2026-01-09 23:29:12,107 | INFO     | intersect: -833094813.009665
[2026-01-10 00:30:25] 2026-01-09 23:29:12,107 | INFO     | chi2: 1.591453860715482
[2026-01-10 00:30:25] 2026-01-09 23:29:12,108 | INFO     | current chi2=1.591453860715482 (change=-0.020507849262244277 %)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,108 | INFO     | right removable region: 212
[2026-01-10 00:30:25] 2026-01-09 23:29:12,108 | INFO     | sum of square deviations: 3212467674.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,110 | INFO     | sum of deviations: -61798652321.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,110 | INFO     | mean x: 1767994601.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,110 | INFO     | mean y: 2522891.357798165
[2026-01-10 00:30:25] 2026-01-09 23:29:12,110 | INFO     | intersect: 34013661602.818615
[2026-01-10 00:30:25] 2026-01-09 23:29:12,111 | INFO     | chi2: 1.8464961736531542
[2026-01-10 00:30:25] 2026-01-09 23:29:12,111 | INFO     | current chi2=1.8464961736531542 (change=42.709473288657996 %)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,111 | INFO     | sum of square deviations: 2996454322.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,113 | INFO     | sum of deviations: -61478932411.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,113 | INFO     | mean x: 1767994754.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,113 | INFO     | mean y: 2522628.61971831
[2026-01-10 00:30:25] 2026-01-09 23:29:12,113 | INFO     | intersect: 36276871677.137794
[2026-01-10 00:30:25] 2026-01-09 23:29:12,114 | INFO     | chi2: 1.8293236289372596
[2026-01-10 00:30:25] 2026-01-09 23:29:12,114 | INFO     | current chi2=1.8293236289372596 (change=0.9300070566580155 %)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,114 | INFO     | left removable region: 20
[2026-01-10 00:30:25] 2026-01-09 23:29:12,115 | INFO     | sum of square deviations: 2194675568.0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,116 | INFO     | sum of deviations: -17055169248.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,116 | INFO     | mean x: 1767994723.5
[2026-01-10 00:30:25] 2026-01-09 23:29:12,116 | INFO     | mean y: 2534107.390625
[2026-01-10 00:30:25] 2026-01-09 23:29:12,117 | INFO     | intersect: 13741899360.00798
[2026-01-10 00:30:25] 2026-01-09 23:29:12,117 | INFO     | chi2: 0.11256791484120018
[2026-01-10 00:30:25] 2026-01-09 23:29:12,117 | INFO     | current memory leak: -7.77 B/s (using 192 data points, chi2=0.11)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | ..............................
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | . Timing measurements:
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | . get job = 0 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | . initial setup = 1 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | . payload setup = 6 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,118 | INFO     | . stage-in = 0 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,119 | INFO     | . payload execution = 13557 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,119 | INFO     | . stage-out = 4 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,119 | INFO     | . log creation = 1 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,119 | INFO     | ..............................
[2026-01-10 00:30:25] 2026-01-09 23:29:12,275 | INFO     | 
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | job summary report
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | --------------------------------------------------
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | PanDA job id: 6963167686
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | task id: 47898826
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | errors: (none)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | pilot state: finished 
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | transexitcode: 0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,276 | INFO     | exeerrorcode: 0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | exeerrordiag: 
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | exitcode: 0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | exitmsg: OK
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | cpuconsumptiontime: 72637 s
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | nevents: 400
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | neventsw: 0
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | pid: 26267
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | pgrp: 26267
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | corecount: 8
[2026-01-10 00:30:25] 2026-01-09 23:29:12,277 | INFO     | event service: False
[2026-01-10 00:30:25] 2026-01-09 23:29:12,278 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 13567: 2314164, 13572: 2323218, 13687: 2323356}
[2026-01-10 00:30:25] 2026-01-09 23:29:12,278 | INFO     | --------------------------------------------------
[2026-01-10 00:30:25] 2026-01-09 23:29:12,278 | INFO     | 
[2026-01-10 00:30:25] 2026-01-09 23:29:12,278 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-10 00:30:25] 2026-01-09 23:29:12,854 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:30:25] 2026-01-09 23:29:12,857 | INFO     | job 6963167686 has completed (purged errors)
[2026-01-10 00:30:25] 2026-01-09 23:29:12,857 | INFO     | overall cleanup function is called
[2026-01-10 00:30:25] 2026-01-09 23:29:13,866 | INFO     | --- collectZombieJob: --- 10, [26267]
[2026-01-10 00:30:25] 2026-01-09 23:29:13,866 | INFO     | zombie collector waiting for pid 26267
[2026-01-10 00:30:25] 2026-01-09 23:29:13,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:30:25] 2026-01-09 23:29:13,866 | INFO     | collected zombie processes
[2026-01-10 00:30:25] 2026-01-09 23:29:13,866 | INFO     | will attempt to kill all subprocesses of pid=26267
[2026-01-10 00:30:25] 2026-01-09 23:29:13,951 | INFO     | process IDs to be killed: [26267] (in reverse order)
[2026-01-10 00:30:25] 2026-01-09 23:29:14,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:30:25] 2026-01-09 23:29:14,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:30:25] 2026-01-09 23:29:14,929 | INFO     | did not find any defunct processes belonging to 26267
[2026-01-10 00:30:25] 2026-01-09 23:29:14,930 | INFO     | did not find any defunct processes belonging to 26267
[2026-01-10 00:30:25] 2026-01-09 23:29:14,931 | INFO     | ready for new job
[2026-01-10 00:30:25] 2026-01-09 23:29:14,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:30:25] 2026-01-09 23:29:14,933 | INFO     | ***************************************
[2026-01-10 00:30:25] 2026-01-09 23:29:14,933 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:30:25] 2026-01-09 23:29:14,933 | INFO     | ***************************************
[2026-01-10 00:30:25] 2026-01-09 23:29:14,933 | INFO     | 
[2026-01-10 00:30:25] 2026-01-09 23:29:14,934 | INFO     | pilot is running in a VM
[2026-01-10 00:30:25] 2026-01-09 23:29:14,934 | INFO     | architecture information:
[2026-01-10 00:30:25] 2026-01-09 23:29:14,943 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:30:25] 2026-01-09 23:29:15,189 | INFO     | cat /etc/os-release:
[2026-01-10 00:30:25] NAME="CentOS Linux"
[2026-01-10 00:30:25] VERSION="7 (Core)"
[2026-01-10 00:30:25] ID="centos"
[2026-01-10 00:30:25] ID_LIKE="rhel fedora"
[2026-01-10 00:30:25] VERSION_ID="7"
[2026-01-10 00:30:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:30:25] ANSI_COLOR="0;31"
[2026-01-10 00:30:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:30:25] HOME_URL="https://www.centos.org/"
[2026-01-10 00:30:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:30:25] 
[2026-01-10 00:30:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:30:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:30:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:30:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:30:25] 
[2026-01-10 00:30:25] 2026-01-09 23:29:15,189 | INFO     | ***************************************
[2026-01-10 00:30:25] 2026-01-09 23:29:15,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-10 00:30:25] 2026-01-09 23:29:15,964 | INFO     | sufficient remaining disk space (497524146176 B)
[2026-01-10 00:30:25] 2026-01-09 23:29:15,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:30:25] 2026-01-09 23:29:15,965 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:30:25] 2026-01-09 23:29:15,965 | INFO     | update_server=False
[2026-01-10 00:30:25] 2026-01-09 23:29:15,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:30:25] 2026-01-09 23:29:15,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:30:25] 2026-01-09 23:29:15,966 | INFO     | aborting loop
[2026-01-10 00:30:25] 2026-01-09 23:29:15,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:30:25] 2026-01-09 23:29:16,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:30:25] 2026-01-09 23:29:16,454 | INFO     | all payload control threads have been joined
[2026-01-10 00:30:25] 2026-01-09 23:29:16,537 | INFO     | all data control threads have been joined
[2026-01-10 00:30:25] 2026-01-09 23:29:16,971 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:16,972 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,117 | INFO     | all job control threads have been joined
[2026-01-10 00:30:25] 2026-01-09 23:29:17,163 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:30:25] 2026-01-09 23:29:17,353 | INFO     | [job] validate thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,355 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,414 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,460 | INFO     | [payload] control thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,492 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,543 | INFO     | [data] control thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,623 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,771 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,898 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:17,980 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:18,123 | INFO     | [job] control thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:18,296 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:20,226 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:30:25] 2026-01-09 23:29:44,165 | INFO     | PID=19815 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:30:25] 2026-01-09 23:29:44,165 | INFO     | .. there are 2 such processes running
[2026-01-10 00:30:25] 2026-01-09 23:29:44,170 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:30:25] 2026-01-09 23:29:44,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:30:25] 2026-01-09 23:29:44,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:30:25] 2026-01-09 23:30:12,746 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:30:25] 2026-01-09 23:30:14,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667939620672)>', '<ExcThread(monitor, started 140667250517760)>']
[2026-01-10 00:30:25] 2026-01-09 23:30:14,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:30:25] 2026-01-09 23:30:14,350 | INFO     | [monitor] control thread has ended
[2026-01-10 00:30:25] 2026-01-09 23:30:19,200 | INFO     | all workflow threads have been joined
[2026-01-10 00:30:25] 2026-01-09 23:30:19,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:30:25] 2026-01-09 23:30:19,200 | INFO     | traces error code: 0
[2026-01-10 00:30:25] 2026-01-09 23:30:19,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:30:25] 2026-01-09 23:30:19,701 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:30:25] 2026-01-09 23:30:19,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:30:25] 2026-01-09 23:30:19,898 [wrapper] pilotpid: 19815
[2026-01-10 00:30:25] 2026-01-09 23:30:20,012 [wrapper] Pilot exit status: 0
[2026-01-10 00:30:25] 2026-01-09 23:30:20,518 [wrapper] pandaids: 6963167686
[2026-01-10 00:30:25] 2026-01-09 23:30:21,622 [wrapper] cleanup supervisor_pilot 30175 19816
[2026-01-10 00:30:25] 2026-01-09 23:30:21,738 [wrapper] Test setup, not cleaning
[2026-01-10 00:30:25] 2026-01-09 23:30:21,828 [wrapper] apfmon messages muted
[2026-01-10 00:30:25] 2026-01-09 23:30:21,929 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:30:25] 2026-01-09 23:30:22,061 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:30:25]  *** Error codes and diagnostics ***
[2026-01-10 00:30:25]     "exeErrorCode": 0,
[2026-01-10 00:30:25]     "exeErrorDiag": "",
[2026-01-10 00:30:25]     "pilotErrorCode": 0,
[2026-01-10 00:30:25]     "pilotErrorDiag": "",
[2026-01-10 00:30:25]  *** Listing of results directory ***
[2026-01-10 00:30:25] total 441832
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 00:30:25] -rwx------. 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:03 queuedata.json
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:30:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:40 run_atlas
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:40 job.xml
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc 223126381 Jan  9 20:40 EVNT.47898824._001336.pool.root.1
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc    592395 Jan  9 20:40 input.tar.gz
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc      6389 Jan  9 20:40 init_data.xml
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:40 start_atlas.sh
[2026-01-10 00:30:25] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:40 shared
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:40 boinc_lockfile
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc      2520 Jan  9 20:40 pandaJob.out
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc    989364 Jan  9 20:40 agis_schedconf.cvmfs.json
[2026-01-10 00:30:25] drwx------. 5 boinc boinc      4096 Jan  9 20:40 pilot3
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc 220856400 Jan 10 00:25 HITS.47898826._035927.pool.root.1
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc       530 Jan 10 00:26 boinc_task_state.xml
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc      1017 Jan 10 00:27 memory_monitor_summary.json
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc   1516240 Jan 10 00:27 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc    432923 Jan 10 00:27 log.47898826._035927.job.log.tgz.1
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc      7774 Jan 10 00:29 heartbeat.json
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc        95 Jan 10 00:29 pilot_heartbeat.json
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc      8192 Jan 10 00:29 boinc_mmap_file
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc        28 Jan 10 00:29 wrapper_checkpoint.txt
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc      4884 Jan 10 00:30 pilotlog.txt
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc   1843433 Jan 10 00:30 log.47898826._035927.job.log.1
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc       357 Jan 10 00:30 output.list
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc       620 Jan 10 00:30 runtime_log
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc   2293760 Jan 10 00:30 result.tar.gz
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc      8817 Jan 10 00:30 runtime_log.err
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc       656 Jan 10 00:30 9F4NDmY1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYmgKDmforE3n.diag
[2026-01-10 00:30:25] -rw-r--r--. 1 boinc boinc     20635 Jan 10 00:30 stderr.txt
[2026-01-10 00:30:25] HITS file was successfully produced:
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc 220856400 Jan 10 00:25 shared/HITS.pool.root.1
[2026-01-10 00:30:25]  *** Contents of shared directory: ***
[2026-01-10 00:30:25] total 436420
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc 223126381 Jan  9 20:40 ATLAS.root_0
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc    592395 Jan  9 20:40 input.tar.gz
[2026-01-10 00:30:25] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:40 start_atlas.sh
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc 220856400 Jan 10 00:25 HITS.pool.root.1
[2026-01-10 00:30:25] -rw-------. 1 boinc boinc   2293760 Jan 10 00:30 result.tar.gz
00:30:26 (16089): run_atlas exited; CPU time 72739.217052
00:30:26 (16089): called boinc_finish(0)

</stderr_txt>
]]>

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