Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:03:57 (331600): wrapper (7.7.26015): starting
12:03:57 (331600): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:03:57] Arguments: --nthreads 8
[2026-01-09 12:03:57] Threads: 8
[2026-01-09 12:03:57] Checking for CVMFS
[2026-01-09 12:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:03:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:03:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:03:59] 2.13.3.0 8993 14469 104328 154950 3 344 32856448 40960001 28569 16776704 0 50799087 99.883 26227442 45245 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:03:59] CVMFS is ok
[2026-01-09 12:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:03:59] Further information can be found at the LHC@home message board.
[2026-01-09 12:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:03:59] Checking for apptainer binary...
[2026-01-09 12:03:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:03:59] Running /usr/bin/apptainer --version
[2026-01-09 12:03:59] apptainer version 1.4.5-2.el9
[2026-01-09 12:03:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:03:59] c-208-40.aglt2.org
[2026-01-09 12:03:59] apptainer works
[2026-01-09 12:03:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:03:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:03:59] Starting ATLAS job with PandaID=6963165853
[2026-01-09 12:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:42:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:42:51] 2026-01-09 23:41:45,757 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 18:42:51] 2026-01-09 23:41:45,766 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1843281249985
[2026-01-09 18:42:51] 2026-01-09 23:41:45,791 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963165853/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,792 | INFO     | extracted standard info from prmon json
[2026-01-09 18:42:51] 2026-01-09 23:41:45,792 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:42:51] 2026-01-09 23:41:45,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:42:51] 2026-01-09 23:41:45,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:42:51] 2026-01-09 23:41:45,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:42:51] 2026-01-09 23:41:45,795 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:42:51] 2026-01-09 23:41:45,796 | INFO     | sum of square deviations: 18112027633.54639
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | sum of deviations: 224757433506.196
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | mean x: 1767990253.6185567
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | mean y: 2442542.0283505153
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | intersect: -21937064171.802193
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | chi2: 5.281627262564007
[2026-01-09 18:42:51] 2026-01-09 23:41:45,802 | INFO     | sum of square deviations: 17420810098.475178
[2026-01-09 18:42:51] 2026-01-09 23:41:45,808 | INFO     | sum of deviations: 247230098964.79126
[2026-01-09 18:42:51] 2026-01-09 23:41:45,808 | INFO     | mean x: 1767990101.1201046
[2026-01-09 18:42:51] 2026-01-09 23:41:45,808 | INFO     | mean y: 2447440.221932115
[2026-01-09 18:42:51] 2026-01-09 23:41:45,808 | INFO     | intersect: -25088255299.655453
[2026-01-09 18:42:51] 2026-01-09 23:41:45,809 | INFO     | chi2: 4.5110584421795386
[2026-01-09 18:42:51] 2026-01-09 23:41:45,809 | INFO     | current chi2=4.5110584421795386 (change=14.589610021256782 %)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,809 | INFO     | right removable region: 382
[2026-01-09 18:42:51] 2026-01-09 23:41:45,809 | INFO     | sum of square deviations: 17420782038.475178
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | sum of deviations: 109870929468.62125
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | mean x: 1767990406.1201046
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | mean y: 2467860.4647519584
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | intersect: -11148050456.279173
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | chi2: 1.9463280481780167
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | current chi2=1.9463280481780167 (change=63.14908357934451 %)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,811 | INFO     | sum of square deviations: 16747350730.902147
[2026-01-09 18:42:51] 2026-01-09 23:41:45,817 | INFO     | sum of deviations: 55753651448.8597
[2026-01-09 18:42:51] 2026-01-09 23:41:45,817 | INFO     | mean x: 1767990558.6216931
[2026-01-09 18:42:51] 2026-01-09 23:41:45,817 | INFO     | mean y: 2480081.187830688
[2026-01-09 18:42:51] 2026-01-09 23:41:45,818 | INFO     | intersect: -5883342157.453418
[2026-01-09 18:42:51] 2026-01-09 23:41:45,818 | INFO     | chi2: 1.0897437968812385
[2026-01-09 18:42:51] 2026-01-09 23:41:45,818 | INFO     | current chi2=1.0897437968812385 (change=44.01027114101541 %)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,818 | INFO     | sum of square deviations: 16091501148.327171
[2026-01-09 18:42:51] 2026-01-09 23:41:45,820 | INFO     | sum of deviations: 30377576137.262745
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | mean x: 1767990711.1233244
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | mean y: 2485971.820375335
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | intersect: -3335131317.0865297
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | chi2: 0.9426476529664063
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | current chi2=0.9426476529664063 (change=13.498231817039 %)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,824 | INFO     | left removable region: 30
[2026-01-09 18:42:51] 2026-01-09 23:41:45,825 | INFO     | sum of square deviations: 13523710539.988699
[2026-01-09 18:42:51] 2026-01-09 23:41:45,826 | INFO     | sum of deviations: 16460646319.409096
[2026-01-09 18:42:51] 2026-01-09 23:41:45,826 | INFO     | mean x: 1767990985.6306818
[2026-01-09 18:42:51] 2026-01-09 23:41:45,826 | INFO     | mean y: 2501063.2954545454
[2026-01-09 18:42:51] 2026-01-09 23:41:45,826 | INFO     | intersect: -2149443421.4904833
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | chi2: 0.0023948116422448547
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | current memory leak: 1.22 B/s (using 352 data points, chi2=0.00)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | could have reported an average CPU frequency of 3800 MHz (16 samples)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | ..............................
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | . Timing measurements:
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | . get job = 0 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | . initial setup = 8 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | . payload setup = 55 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,827 | INFO     | . stage-in = 0 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,828 | INFO     | . payload execution = 23639 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,828 | INFO     | . stage-out = 3 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,828 | INFO     | . log creation = 0 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,828 | INFO     | ..............................
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | 
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | job summary report
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | --------------------------------------------------
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | PanDA job id: 6963165853
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | task id: 47898826
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | errors: (none)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:42:51] 2026-01-09 23:41:45,928 | INFO     | pilot state: finished 
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | transexitcode: 0
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | exeerrorcode: 0
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | exeerrordiag: 
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | exitcode: 0
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | exitmsg: OK
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | cpuconsumptiontime: 31502 s
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | nevents: 400
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | neventsw: 0
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | pid: 347002
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | pgrp: 347002
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | corecount: 8
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | event service: False
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 32: 2284317, 33: 2284345, 23698: 2319826, 23703: 2328824, 23704: 2328880, 23739: 2329074}
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | --------------------------------------------------
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | 
[2026-01-09 18:42:51] 2026-01-09 23:41:45,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 18:42:51] 2026-01-09 23:41:45,981 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,981 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,981 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,981 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,982 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:42:51] 2026-01-09 23:41:45,983 | INFO     | job 6963165853 has completed (purged errors)
[2026-01-09 18:42:51] 2026-01-09 23:41:45,983 | INFO     | overall cleanup function is called
[2026-01-09 18:42:51] 2026-01-09 23:41:46,991 | INFO     | --- collectZombieJob: --- 10, [347002]
[2026-01-09 18:42:51] 2026-01-09 23:41:46,991 | INFO     | zombie collector waiting for pid 347002
[2026-01-09 18:42:51] 2026-01-09 23:41:46,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:42:51] 2026-01-09 23:41:46,991 | INFO     | collected zombie processes
[2026-01-09 18:42:51] 2026-01-09 23:41:46,991 | INFO     | will attempt to kill all subprocesses of pid=347002
[2026-01-09 18:42:51] 2026-01-09 23:41:48,463 | INFO     | process IDs to be killed: [347002] (in reverse order)
[2026-01-09 18:42:51] 2026-01-09 23:41:49,201 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:42:51] 2026-01-09 23:41:49,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:42:51] 2026-01-09 23:41:49,254 | INFO     | did not find any defunct processes belonging to 347002
[2026-01-09 18:42:51] 2026-01-09 23:41:49,312 | INFO     | did not find any defunct processes belonging to 347002
[2026-01-09 18:42:51] 2026-01-09 23:41:49,313 | INFO     | ready for new job
[2026-01-09 18:42:51] 2026-01-09 23:41:49,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:42:51] 2026-01-09 23:41:49,330 | INFO     | ***************************************
[2026-01-09 18:42:51] 2026-01-09 23:41:49,330 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:42:51] 2026-01-09 23:41:49,330 | INFO     | ***************************************
[2026-01-09 18:42:51] 2026-01-09 23:41:49,330 | INFO     | 
[2026-01-09 18:42:51] 2026-01-09 23:41:49,351 | INFO     | architecture information:
[2026-01-09 18:42:51] 2026-01-09 23:41:49,403 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:42:51] 2026-01-09 23:41:49,429 | INFO     | cat /etc/os-release:
[2026-01-09 18:42:51] NAME="CentOS Linux"
[2026-01-09 18:42:51] VERSION="7 (Core)"
[2026-01-09 18:42:51] ID="centos"
[2026-01-09 18:42:51] ID_LIKE="rhel fedora"
[2026-01-09 18:42:51] VERSION_ID="7"
[2026-01-09 18:42:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:42:51] ANSI_COLOR="0;31"
[2026-01-09 18:42:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:42:51] HOME_URL="https://www.centos.org/"
[2026-01-09 18:42:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:42:51] 
[2026-01-09 18:42:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:42:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:42:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:42:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:42:51] 
[2026-01-09 18:42:51] 2026-01-09 23:41:49,429 | INFO     | ***************************************
[2026-01-09 18:42:51] 2026-01-09 23:41:49,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 18:42:51] 2026-01-09 23:41:49,990 | INFO     | sufficient remaining disk space (170623238144 B)
[2026-01-09 18:42:51] 2026-01-09 23:41:49,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:42:51] 2026-01-09 23:41:49,991 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:42:51] 2026-01-09 23:41:49,991 | INFO     | update_server=False
[2026-01-09 18:42:51] 2026-01-09 23:41:49,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:42:51] 2026-01-09 23:41:49,996 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:42:51] 2026-01-09 23:41:49,996 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:42:51] 2026-01-09 23:41:49,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:42:51] 2026-01-09 23:41:49,996 | INFO     | will abort loop
[2026-01-09 18:42:51] 2026-01-09 23:41:50,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:42:51] 2026-01-09 23:41:50,375 | INFO     | all payload control threads have been joined
[2026-01-09 18:42:51] 2026-01-09 23:41:50,923 | INFO     | all data control threads have been joined
[2026-01-09 18:42:51] 2026-01-09 23:41:50,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:42:51] 2026-01-09 23:41:50,996 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,002 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,035 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,211 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,370 | INFO     | all job control threads have been joined
[2026-01-09 18:42:51] 2026-01-09 23:41:51,381 | INFO     | [payload] control thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,929 | INFO     | [data] control thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:51,955 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,068 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,095 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,169 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,252 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,358 | INFO     | [job] validate thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,362 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,376 | INFO     | [job] control thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:41:52,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:42:51] 2026-01-09 23:41:56,457 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:42:51] 2026-01-09 23:42:19,772 | INFO     | PID=338358 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 18:42:51] 2026-01-09 23:42:19,772 | INFO     | .. there are 22 such processes running
[2026-01-09 18:42:51] 2026-01-09 23:42:19,773 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:42:51] 2026-01-09 23:42:19,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:42:51] 2026-01-09 23:42:19,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:42:51] 2026-01-09 23:42:43,459 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:42:51] 2026-01-09 23:42:44,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958962857792)>', '<ExcThread(monitor, started 139958580913920)>']
[2026-01-09 18:42:51] 2026-01-09 23:42:44,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:42:51] 2026-01-09 23:42:44,926 | INFO     | [monitor] control thread has ended
[2026-01-09 18:42:51] 2026-01-09 23:42:49,522 | INFO     | all workflow threads have been joined
[2026-01-09 18:42:51] 2026-01-09 23:42:49,522 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:42:51] 2026-01-09 23:42:49,522 | INFO     | traces error code: 0
[2026-01-09 18:42:51] 2026-01-09 23:42:49,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:42:51] 2026-01-09 23:42:49,723 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:42:51] 2026-01-09 23:42:49,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:42:51] 2026-01-09 23:42:49,771 [wrapper] pilotpid: 338358
[2026-01-09 18:42:51] 2026-01-09 23:42:49,789 [wrapper] Pilot exit status: 0
[2026-01-09 18:42:51] 2026-01-09 23:42:49,942 [wrapper] pandaids: 6963165853
[2026-01-09 18:42:51] 2026-01-09 23:42:50,303 [wrapper] cleanup supervisor_pilot 1494352 338359
[2026-01-09 18:42:51] 2026-01-09 23:42:50,315 [wrapper] Test setup, not cleaning
[2026-01-09 18:42:51] 2026-01-09 23:42:50,336 [wrapper] apfmon messages muted
[2026-01-09 18:42:51] 2026-01-09 23:42:50,371 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:42:51] 2026-01-09 23:42:50,403 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:42:51]  *** Error codes and diagnostics ***
[2026-01-09 18:42:51]     "exeErrorCode": 0,
[2026-01-09 18:42:51]     "exeErrorDiag": "",
[2026-01-09 18:42:51]     "pilotErrorCode": 0,
[2026-01-09 18:42:51]     "pilotErrorDiag": "",
[2026-01-09 18:42:51]  *** Listing of results directory ***
[2026-01-09 18:42:51] total 447116
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 18:42:51] -rwx------. 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:42:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:03 run_atlas
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:03 job.xml
[2026-01-09 18:42:51] -rw-r--r--. 2 boincer umatlas 225261758 Jan  9 12:03 EVNT.47898824._001354.pool.root.1
[2026-01-09 18:42:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:03 start_atlas.sh
[2026-01-09 18:42:51] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:03 shared
[2026-01-09 18:42:51] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 12:03 input.tar.gz
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:03 boinc_lockfile
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:03 pandaJob.out
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas        57 Jan  9 12:04 setup.sh.local
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas    989356 Jan  9 12:04 agis_schedconf.cvmfs.json
[2026-01-09 18:42:51] drwx------. 5 boincer umatlas      4096 Jan  9 12:05 pilot3
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas 221212548 Jan  9 18:40 HITS.47898826._034966.pool.root.1
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas       531 Jan  9 18:40 boinc_task_state.xml
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas      7184 Jan  9 18:40 init_data.xml
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas      1032 Jan  9 18:41 memory_monitor_summary.json
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas    595850 Jan  9 18:41 log.47898826._034966.job.log.tgz.1
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas      7776 Jan  9 18:41 heartbeat.json
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas        95 Jan  9 18:42 pilot_heartbeat.json
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas      5010 Jan  9 18:42 pilotlog.txt
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas        28 Jan  9 18:42 wrapper_checkpoint.txt
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas   3134244 Jan  9 18:42 log.47898826._034966.job.log.1
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas       357 Jan  9 18:42 output.list
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:42 runtime_log
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas   3747840 Jan  9 18:42 result.tar.gz
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:42 boinc_mmap_file
[2026-01-09 18:42:51] -rw-------. 1 boincer umatlas       655 Jan  9 18:42 zzhMDmM1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNzlKDmmV5rZn.diag
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 18:42 runtime_log.err
[2026-01-09 18:42:51] -rw-r--r--. 1 boincer umatlas     21195 Jan  9 18:42 stderr.txt
[2026-01-09 18:43:12] HITS file was successfully produced:
[2026-01-09 18:43:12] -rw-------. 1 boincer umatlas 221212548 Jan  9 18:40 shared/HITS.pool.root.1
[2026-01-09 18:43:12]  *** Contents of shared directory: ***
[2026-01-09 18:43:12] total 440272
[2026-01-09 18:43:12] -rw-r--r--. 2 boincer umatlas 225261758 Jan  9 12:03 ATLAS.root_0
[2026-01-09 18:43:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:03 start_atlas.sh
[2026-01-09 18:43:12] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 12:03 input.tar.gz
[2026-01-09 18:43:12] -rw-------. 1 boincer umatlas 221212548 Jan  9 18:40 HITS.pool.root.1
[2026-01-09 18:43:12] -rw-------. 1 boincer umatlas   3747840 Jan  9 18:42 result.tar.gz
18:43:14 (331600): run_atlas exited; CPU time 32247.951139
18:43:14 (331600): called boinc_finish(0)

</stderr_txt>
]]>

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