Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:49:15 (28458): wrapper (7.7.26015): starting
11:49:15 (28458): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:49:15] Arguments: --nthreads 8
[2026-01-09 11:49:15] Threads: 8
[2026-01-09 11:49:15] Checking for CVMFS
[2026-01-09 11:49:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:49:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:49:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:49:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:49:16] 2.11.2.0 2866 136920 114000 154950 3 57 19518626 20275200 1 130560 0 37372031 99.813 9587785 24916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:49:16] CVMFS is ok
[2026-01-09 11:49:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:49:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:49:16] Further information can be found at the LHC@home message board.
[2026-01-09 11:49:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:49:16] Checking for apptainer binary...
[2026-01-09 11:49:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:49:16] Running /usr/bin/apptainer --version
[2026-01-09 11:49:16] apptainer version 1.3.2-1.el7
[2026-01-09 11:49:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:49:18] c-204-35.aglt2.org
[2026-01-09 11:49:18] apptainer works
[2026-01-09 11:49:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:49:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:49:18] Starting ATLAS job with PandaID=6963165548
[2026-01-09 11:49:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:44:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:44:59] 2026-01-09 19:44:13,662 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 14:44:59] 2026-01-09 19:44:13,665 | INFO     | time since job start (10478s) is within the limit (349056.0s)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,667 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 14:44:59] 2026-01-09 19:44:13,669 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963165548/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,670 | INFO     | extracted standard info from prmon json
[2026-01-09 14:44:59] 2026-01-09 19:44:13,671 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:44:59] 2026-01-09 19:44:13,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:44:59] 2026-01-09 19:44:13,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:44:59] 2026-01-09 19:44:13,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:44:59] 2026-01-09 19:44:13,676 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:44:59] 2026-01-09 19:44:13,676 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,677 | INFO     | sum of deviations: -5988683173.999998
[2026-01-09 14:44:59] 2026-01-09 19:44:13,677 | INFO     | mean x: 1767982621.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,678 | INFO     | mean y: 2494660.7441860465
[2026-01-09 14:44:59] 2026-01-09 19:44:13,678 | INFO     | intersect: 6713077549.223973
[2026-01-09 14:44:59] 2026-01-09 19:44:13,678 | INFO     | chi2: 2.324767889801084
[2026-01-09 14:44:59] 2026-01-09 19:44:13,679 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,680 | INFO     | sum of deviations: 5428520295.999997
[2026-01-09 14:44:59] 2026-01-09 19:44:13,680 | INFO     | mean x: 1767982469.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,680 | INFO     | mean y: 2507384.1976047903
[2026-01-09 14:44:59] 2026-01-09 19:44:13,680 | INFO     | intersect: -6643290900.734056
[2026-01-09 14:44:59] 2026-01-09 19:44:13,680 | INFO     | chi2: 1.5625894831371498
[2026-01-09 14:44:59] 2026-01-09 19:44:13,681 | INFO     | current chi2=1.5625894831371498 (change=32.78513997064666 %)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,681 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,682 | INFO     | sum of deviations: 5287666964.999998
[2026-01-09 14:44:59] 2026-01-09 19:44:13,682 | INFO     | mean x: 1767982316.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,682 | INFO     | mean y: 2507213.5061728396
[2026-01-09 14:44:59] 2026-01-09 19:44:13,683 | INFO     | intersect: -7088943550.211869
[2026-01-09 14:44:59] 2026-01-09 19:44:13,683 | INFO     | chi2: 1.5634203062344452
[2026-01-09 14:44:59] 2026-01-09 19:44:13,683 | INFO     | current chi2=1.5634203062344452 (change=-0.05316963324412679 %)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,683 | INFO     | right removable region: 161
[2026-01-09 14:44:59] 2026-01-09 19:44:13,683 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,684 | INFO     | sum of deviations: -30773621112.000008
[2026-01-09 14:44:59] 2026-01-09 19:44:13,685 | INFO     | mean x: 1767982774.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,685 | INFO     | mean y: 2522545.0778443115
[2026-01-09 14:44:59] 2026-01-09 19:44:13,685 | INFO     | intersect: 37676750978.8395
[2026-01-09 14:44:59] 2026-01-09 19:44:13,685 | INFO     | chi2: 0.9315010393060302
[2026-01-09 14:44:59] 2026-01-09 19:44:13,685 | INFO     | current chi2=0.9315010393060302 (change=59.931439031286125 %)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,686 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,686 | INFO     | sum of deviations: -28946588548.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | mean x: 1767982926.5
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | mean y: 2520262.734567901
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | intersect: 38823682724.870834
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | chi2: 0.9163121791957233
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | current chi2=0.9163121791957233 (change=1.6305789762320266 %)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,687 | INFO     | left removable region: 20
[2026-01-09 14:44:59] 2026-01-09 19:44:13,688 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,688 | INFO     | sum of deviations: -6404209928.000001
[2026-01-09 14:44:59] 2026-01-09 19:44:13,689 | INFO     | mean x: 1767982896.0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,689 | INFO     | mean y: 2519258.524822695
[2026-01-09 14:44:59] 2026-01-09 19:44:13,689 | INFO     | intersect: 13029077994.654964
[2026-01-09 14:44:59] 2026-01-09 19:44:13,689 | INFO     | chi2: 0.07495303516882765
[2026-01-09 14:44:59] 2026-01-09 19:44:13,689 | INFO     | current memory leak: -7.37 B/s (using 141 data points, chi2=0.07)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,690 | INFO     | could have reported an average CPU frequency of 2012 MHz (9 samples)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,690 | INFO     | ..............................
[2026-01-09 14:44:59] 2026-01-09 19:44:13,690 | INFO     | . Timing measurements:
[2026-01-09 14:44:59] 2026-01-09 19:44:13,690 | INFO     | . get job = 0 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . initial setup = 2 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . payload setup = 8 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . stage-in = 0 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . payload execution = 10441 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . stage-out = 0 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | . log creation = 0 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,691 | INFO     | ..............................
[2026-01-09 14:44:59] 2026-01-09 19:44:13,957 | INFO     | 
[2026-01-09 14:44:59] 2026-01-09 19:44:13,957 | INFO     | job summary report
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | --------------------------------------------------
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | PanDA job id: 6963165548
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | task id: 47898826
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | errors: (none)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:44:59] 2026-01-09 19:44:13,958 | INFO     | pilot state: finished 
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | transexitcode: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | exeerrorcode: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | exeerrordiag: 
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | exitcode: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | exitmsg: OK
[2026-01-09 14:44:59] 2026-01-09 19:44:13,959 | INFO     | cpuconsumptiontime: 78845 s
[2026-01-09 14:44:59] 2026-01-09 19:44:13,960 | INFO     | nevents: 400
[2026-01-09 14:44:59] 2026-01-09 19:44:13,960 | INFO     | neventsw: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,960 | INFO     | pid: 6196
[2026-01-09 14:44:59] 2026-01-09 19:44:13,960 | INFO     | pgrp: 6196
[2026-01-09 14:44:59] 2026-01-09 19:44:13,960 | INFO     | corecount: 8
[2026-01-09 14:44:59] 2026-01-09 19:44:13,961 | INFO     | event service: False
[2026-01-09 14:44:59] 2026-01-09 19:44:13,961 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 10452: 2312961, 10454: 2322203, 10461: 2322405}
[2026-01-09 14:44:59] 2026-01-09 19:44:13,961 | INFO     | --------------------------------------------------
[2026-01-09 14:44:59] 2026-01-09 19:44:13,961 | INFO     | 
[2026-01-09 14:44:59] 2026-01-09 19:44:13,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 14:44:59] 2026-01-09 19:44:13,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:44:59] 2026-01-09 19:44:13,993 | INFO     | job 6963165548 has completed (purged errors)
[2026-01-09 14:44:59] 2026-01-09 19:44:13,994 | INFO     | overall cleanup function is called
[2026-01-09 14:44:59] 2026-01-09 19:44:15,001 | INFO     | --- collectZombieJob: --- 10, [6196]
[2026-01-09 14:44:59] 2026-01-09 19:44:15,001 | INFO     | zombie collector waiting for pid 6196
[2026-01-09 14:44:59] 2026-01-09 19:44:15,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:44:59] 2026-01-09 19:44:15,008 | INFO     | collected zombie processes
[2026-01-09 14:44:59] 2026-01-09 19:44:15,008 | INFO     | will attempt to kill all subprocesses of pid=6196
[2026-01-09 14:44:59] 2026-01-09 19:44:15,096 | INFO     | process IDs to be killed: [6196] (in reverse order)
[2026-01-09 14:44:59] 2026-01-09 19:44:15,151 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:44:59] 2026-01-09 19:44:15,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:44:59] 2026-01-09 19:44:15,156 | INFO     | did not find any defunct processes belonging to 6196
[2026-01-09 14:44:59] 2026-01-09 19:44:15,160 | INFO     | did not find any defunct processes belonging to 6196
[2026-01-09 14:44:59] 2026-01-09 19:44:15,161 | INFO     | ready for new job
[2026-01-09 14:44:59] 2026-01-09 19:44:15,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:44:59] 2026-01-09 19:44:15,163 | INFO     | ***************************************
[2026-01-09 14:44:59] 2026-01-09 19:44:15,163 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:44:59] 2026-01-09 19:44:15,163 | INFO     | ***************************************
[2026-01-09 14:44:59] 2026-01-09 19:44:15,163 | INFO     | 
[2026-01-09 14:44:59] 2026-01-09 19:44:15,164 | INFO     | architecture information:
[2026-01-09 14:44:59] 2026-01-09 19:44:15,164 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:44:59] 2026-01-09 19:44:15,181 | INFO     | cat /etc/os-release:
[2026-01-09 14:44:59] NAME="CentOS Linux"
[2026-01-09 14:44:59] VERSION="7 (Core)"
[2026-01-09 14:44:59] ID="centos"
[2026-01-09 14:44:59] ID_LIKE="rhel fedora"
[2026-01-09 14:44:59] VERSION_ID="7"
[2026-01-09 14:44:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:44:59] ANSI_COLOR="0;31"
[2026-01-09 14:44:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:44:59] HOME_URL="https://www.centos.org/"
[2026-01-09 14:44:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:44:59] 
[2026-01-09 14:44:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:44:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:44:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:44:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:44:59] 
[2026-01-09 14:44:59] 2026-01-09 19:44:15,182 | INFO     | ***************************************
[2026-01-09 14:44:59] 2026-01-09 19:44:15,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 14:44:59] 2026-01-09 19:44:15,705 | INFO     | sufficient remaining disk space (18501074944 B)
[2026-01-09 14:44:59] 2026-01-09 19:44:15,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:44:59] 2026-01-09 19:44:15,706 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:44:59] 2026-01-09 19:44:15,706 | INFO     | update_server=False
[2026-01-09 14:44:59] 2026-01-09 19:44:15,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:44:59] 2026-01-09 19:44:15,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:44:59] 2026-01-09 19:44:15,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:44:59] 2026-01-09 19:44:15,755 | INFO     | all data control threads have been joined
[2026-01-09 14:44:59] 2026-01-09 19:44:16,041 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:44:59] 2026-01-09 19:44:16,041 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:44:59] 2026-01-09 19:44:16,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:44:59] 2026-01-09 19:44:16,041 | INFO     | will abort loop
[2026-01-09 14:44:59] 2026-01-09 19:44:16,199 | INFO     | all job control threads have been joined
[2026-01-09 14:44:59] 2026-01-09 19:44:16,712 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:16,712 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:16,730 | INFO     | all payload control threads have been joined
[2026-01-09 14:44:59] 2026-01-09 19:44:16,761 | INFO     | [data] control thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:16,791 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:16,855 | INFO     | [job] validate thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,047 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,199 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,205 | INFO     | [job] control thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,608 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,712 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,736 | INFO     | [payload] control thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:44:59] 2026-01-09 19:44:17,802 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,879 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,903 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:17,904 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:21,774 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:44:59] 2026-01-09 19:44:46,879 | INFO     | PID=32134 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 14:44:59] 2026-01-09 19:44:46,879 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:44:59] 2026-01-09 19:44:46,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:44:59] 2026-01-09 19:44:46,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:44:59] 2026-01-09 19:44:52,060 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:44:59] 2026-01-09 19:44:53,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362824202048)>', '<ExcThread(monitor, started 140361854863104)>']
[2026-01-09 14:44:59] 2026-01-09 19:44:53,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:44:59] 2026-01-09 19:44:53,909 | INFO     | [monitor] control thread has ended
[2026-01-09 14:44:59] 2026-01-09 19:44:58,767 | INFO     | all workflow threads have been joined
[2026-01-09 14:44:59] 2026-01-09 19:44:58,767 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:44:59] 2026-01-09 19:44:58,778 | INFO     | traces error code: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:58,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:44:59] 2026-01-09 19:44:58,894 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:44:59] 2026-01-09 19:44:58,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:44:59] 2026-01-09 19:44:58,904 [wrapper] pilotpid: 32134
[2026-01-09 14:44:59] 2026-01-09 19:44:58,908 [wrapper] Pilot exit status: 0
[2026-01-09 14:44:59] 2026-01-09 19:44:58,927 [wrapper] pandaids: 6963165548
[2026-01-09 14:44:59] 2026-01-09 19:44:58,978 [wrapper] cleanup supervisor_pilot 13929 32135
[2026-01-09 14:44:59] 2026-01-09 19:44:58,984 [wrapper] Test setup, not cleaning
[2026-01-09 14:44:59] 2026-01-09 19:44:58,989 [wrapper] apfmon messages muted
[2026-01-09 14:44:59] 2026-01-09 19:44:58,994 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:44:59] 2026-01-09 19:44:58,998 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:44:59]  *** Error codes and diagnostics ***
[2026-01-09 14:44:59]     "exeErrorCode": 0,
[2026-01-09 14:44:59]     "exeErrorDiag": "",
[2026-01-09 14:44:59]     "pilotErrorCode": 0,
[2026-01-09 14:44:59]     "pilotErrorDiag": "",
[2026-01-09 14:44:59]  *** Listing of results directory ***
[2026-01-09 14:44:59] total 439608
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:44:59] -rwx------ 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas       100 Jan  9 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:44:59] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 11:49 run_atlas
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas       105 Jan  9 11:49 job.xml
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas 222838067 Jan  9 11:49 EVNT.47898824._001346.pool.root.1
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 11:49 start_atlas.sh
[2026-01-09 14:44:59] drwxrwx--x 2 boincer umatlas      4096 Jan  9 11:49 shared
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 11:49 input.tar.gz
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas         0 Jan  9 11:49 boinc_lockfile
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 11:49 pandaJob.out
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas        57 Jan  9 11:49 setup.sh.local
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas    989356 Jan  9 11:49 agis_schedconf.cvmfs.json
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas   1516240 Jan  9 11:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:44:59] drwx------ 5 boincer umatlas      4096 Jan  9 11:49 pilot3
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 14:40 init_data.xml
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas 219670136 Jan  9 14:43 HITS.47898826._034767.pool.root.1
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas       530 Jan  9 14:43 boinc_task_state.xml
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas      1050 Jan  9 14:44 memory_monitor_summary.json
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas        95 Jan  9 14:44 pilot_heartbeat.json
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas    417000 Jan  9 14:44 log.47898826._034767.job.log.tgz.1
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas      7849 Jan  9 14:44 heartbeat.json
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 14:44 boinc_mmap_file
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas        28 Jan  9 14:44 wrapper_checkpoint.txt
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas      4932 Jan  9 14:44 pilotlog.txt
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas   1451955 Jan  9 14:44 log.47898826._034767.job.log.1
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas       357 Jan  9 14:44 output.list
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas       620 Jan  9 14:44 runtime_log
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas   1884160 Jan  9 14:44 result.tar.gz
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 14:44 runtime_log.err
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas       662 Jan  9 14:44 Fq4KDmB1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1jgKDmpWlnxm.diag
[2026-01-09 14:44:59] -rw-r--r-- 1 boincer umatlas     21041 Jan  9 14:44 stderr.txt
[2026-01-09 14:44:59] HITS file was successfully produced:
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas 219670136 Jan  9 14:43 shared/HITS.pool.root.1
[2026-01-09 14:44:59]  *** Contents of shared directory: ***
[2026-01-09 14:44:59] total 434584
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas 222838067 Jan  9 11:49 ATLAS.root_0
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 11:49 start_atlas.sh
[2026-01-09 14:44:59] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 11:49 input.tar.gz
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas 219670136 Jan  9 14:43 HITS.pool.root.1
[2026-01-09 14:44:59] -rw------- 1 boincer umatlas   1884160 Jan  9 14:44 result.tar.gz
14:45:00 (28458): run_atlas exited; CPU time 78802.506389
14:45:00 (28458): called boinc_finish(0)

</stderr_txt>
]]>

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