Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:14:35 (2247303): wrapper (7.7.26015): starting
13:14:35 (2247303): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 13:14:35] Arguments: --nthreads 11
[2026-01-09 13:14:35] Threads: 11
[2026-01-09 13:14:35] Checking for CVMFS
[2026-01-09 13:14:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:14:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:14:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:14:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:14:37] 2.13.3.0 5644 12406 153884 154951 0 436 27376851 32935937 9458 16776704 0 10564203 99.654 11767154 47627 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:14:37] CVMFS is ok
[2026-01-09 13:14:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:14:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:14:37] Further information can be found at the LHC@home message board.
[2026-01-09 13:14:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:14:37] Checking for apptainer binary...
[2026-01-09 13:14:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:14:37] Running /usr/bin/apptainer --version
[2026-01-09 13:14:37] apptainer version 1.4.5-2.el9
[2026-01-09 13:14:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:14:38] c6-2-29-4.aglt2.org
[2026-01-09 13:14:38] apptainer works
[2026-01-09 13:14:38] Set ATHENA_PROC_NUMBER=11
[2026-01-09 13:14:38] Set ATHENA_CORE_NUMBER=11
[2026-01-09 13:14:38] Starting ATLAS job with PandaID=6963165597
[2026-01-09 13:14:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:58:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:58:08] 2026-01-09 23:56:58,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:58:08] 2026-01-09 23:56:58,754 | INFO     | time since job start (20492s) is within the limit (349056.0s)
[2026-01-09 18:58:08] 2026-01-09 23:57:00,766 | INFO     | time since job start (20494s) is within the limit (349056.0s)
[2026-01-09 18:58:08] 2026-01-09 23:57:01,241 | INFO     | monitor loop #1266: job 0:6963165597 is in state 'finished'
[2026-01-09 18:58:08] 2026-01-09 23:57:01,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,362 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 18:58:08] 2026-01-09 23:57:02,371 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2888.266410714286
[2026-01-09 18:58:08] 2026-01-09 23:57:02,381 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963165597/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,382 | INFO     | extracted standard info from prmon json
[2026-01-09 18:58:08] 2026-01-09 23:57:02,382 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:58:08] 2026-01-09 23:57:02,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:58:08] 2026-01-09 23:57:02,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:58:08] 2026-01-09 23:57:02,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:58:08] 2026-01-09 23:57:02,388 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:58:08] 2026-01-09 23:57:02,389 | INFO     | sum of square deviations: 11554351246.80538
[2026-01-09 18:58:08] 2026-01-09 23:57:02,392 | INFO     | sum of deviations: 130747124058.61375
[2026-01-09 18:58:08] 2026-01-09 23:57:02,392 | INFO     | mean x: 1767992816.4101796
[2026-01-09 18:58:08] 2026-01-09 23:57:02,392 | INFO     | mean y: 2606236.9371257485
[2026-01-09 18:58:08] 2026-01-09 23:57:02,392 | INFO     | intersect: -20003707502.73149
[2026-01-09 18:58:08] 2026-01-09 23:57:02,393 | INFO     | chi2: 3.4864910557684037
[2026-01-09 18:58:08] 2026-01-09 23:57:02,393 | INFO     | sum of square deviations: 11043177740.079119
[2026-01-09 18:58:08] 2026-01-09 23:57:02,396 | INFO     | sum of deviations: 150643753957.96057
[2026-01-09 18:58:08] 2026-01-09 23:57:02,396 | INFO     | mean x: 1767992663.905775
[2026-01-09 18:58:08] 2026-01-09 23:57:02,396 | INFO     | mean y: 2612092.547112462
[2026-01-09 18:58:08] 2026-01-09 23:57:02,396 | INFO     | intersect: -24115178830.466022
[2026-01-09 18:58:08] 2026-01-09 23:57:02,397 | INFO     | chi2: 2.78993181083886
[2026-01-09 18:58:08] 2026-01-09 23:57:02,397 | INFO     | current chi2=2.78993181083886 (change=19.97880487251173 %)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,397 | INFO     | right removable region: 328
[2026-01-09 18:58:08] 2026-01-09 23:57:02,398 | INFO     | sum of square deviations: 11043114055.100365
[2026-01-09 18:58:08] 2026-01-09 23:57:02,400 | INFO     | sum of deviations: 42995390918.614
[2026-01-09 18:58:08] 2026-01-09 23:57:02,400 | INFO     | mean x: 1767992968.9240122
[2026-01-09 18:58:08] 2026-01-09 23:57:02,401 | INFO     | mean y: 2632347.5045592706
[2026-01-09 18:58:08] 2026-01-09 23:57:02,401 | INFO     | intersect: -6880892395.694157
[2026-01-09 18:58:08] 2026-01-09 23:57:02,401 | INFO     | chi2: 1.0533867563217534
[2026-01-09 18:58:08] 2026-01-09 23:57:02,401 | INFO     | current chi2=1.0533867563217534 (change=69.78662100455058 %)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,402 | INFO     | sum of square deviations: 10547199423.63889
[2026-01-09 18:58:08] 2026-01-09 23:57:02,404 | INFO     | sum of deviations: 13666161107.111122
[2026-01-09 18:58:08] 2026-01-09 23:57:02,404 | INFO     | mean x: 1767993121.4351852
[2026-01-09 18:58:08] 2026-01-09 23:57:02,404 | INFO     | mean y: 2641355.4814814813
[2026-01-09 18:58:08] 2026-01-09 23:57:02,405 | INFO     | intersect: -2288173282.9186616
[2026-01-09 18:58:08] 2026-01-09 23:57:02,405 | INFO     | chi2: 0.8185776339011187
[2026-01-09 18:58:08] 2026-01-09 23:57:02,405 | INFO     | current chi2=0.8185776339011187 (change=22.290874743911534 %)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,405 | INFO     | left removable region: 20
[2026-01-09 18:58:08] 2026-01-09 23:57:02,406 | INFO     | sum of square deviations: 9060537977.948092
[2026-01-09 18:58:08] 2026-01-09 23:57:02,408 | INFO     | sum of deviations: 17258870970.519474
[2026-01-09 18:58:08] 2026-01-09 23:57:02,408 | INFO     | mean x: 1767993243.4415584
[2026-01-09 18:58:08] 2026-01-09 23:57:02,408 | INFO     | mean y: 2653559.3344155843
[2026-01-09 18:58:08] 2026-01-09 23:57:02,408 | INFO     | intersect: -3365089872.6310205
[2026-01-09 18:58:08] 2026-01-09 23:57:02,409 | INFO     | chi2: 0.027581173284054867
[2026-01-09 18:58:08] 2026-01-09 23:57:02,409 | INFO     | current memory leak: 1.90 B/s (using 308 data points, chi2=0.03)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,409 | INFO     | could have reported an average CPU frequency of 2915 MHz (15 samples)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | ..............................
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . Timing measurements:
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . get job = 0 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . initial setup = 4 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . payload setup = 47 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . stage-in = 0 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . payload execution = 20376 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . stage-out = 3 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | . log creation = 0 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,410 | INFO     | ..............................
[2026-01-09 18:58:08] 2026-01-09 23:57:02,809 | INFO     | time since job start (20496s) is within the limit (349056.0s)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,930 | INFO     | 
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | job summary report
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | --------------------------------------------------
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | PanDA job id: 6963165597
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | task id: 47898826
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | errors: (none)
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | pilot state: finished 
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | transexitcode: 0
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | exeerrorcode: 0
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | exeerrordiag: 
[2026-01-09 18:58:08] 2026-01-09 23:57:02,931 | INFO     | exitcode: 0
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | exitmsg: OK
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | cpuconsumptiontime: 54564 s
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | nevents: 400
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | neventsw: 0
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | pid: 2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | pgrp: 2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | corecount: 11
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | event service: False
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 14: 2284289, 23: 2284317, 20428: 2317857, 20432: 2326855, 20435: 2326911, 20444: 2327105}
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | --------------------------------------------------
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | 
[2026-01-09 18:58:08] 2026-01-09 23:57:02,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:58:08] 2026-01-09 23:57:03,009 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:58:08] 2026-01-09 23:57:03,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:58:08] 2026-01-09 23:57:03,011 | INFO     | job 6963165597 has completed (purged errors)
[2026-01-09 18:58:08] 2026-01-09 23:57:03,011 | INFO     | overall cleanup function is called
[2026-01-09 18:58:08] 2026-01-09 23:57:04,030 | INFO     | --- collectZombieJob: --- 10, [2259213]
[2026-01-09 18:58:08] 2026-01-09 23:57:04,031 | INFO     | zombie collector waiting for pid 2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:04,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:58:08] 2026-01-09 23:57:04,031 | INFO     | collected zombie processes
[2026-01-09 18:58:08] 2026-01-09 23:57:04,031 | INFO     | will attempt to kill all subprocesses of pid=2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:05,177 | INFO     | PID=2251766 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 18:58:08] 2026-01-09 23:57:05,178 | INFO     | .. there are 9 such processes running
[2026-01-09 18:58:08] 2026-01-09 23:57:05,231 | INFO     | process IDs to be killed: [2259213] (in reverse order)
[2026-01-09 18:58:08] 2026-01-09 23:57:05,414 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:58:08] 2026-01-09 23:57:05,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:58:08] 2026-01-09 23:57:05,424 | INFO     | did not find any defunct processes belonging to 2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:05,433 | INFO     | did not find any defunct processes belonging to 2259213
[2026-01-09 18:58:08] 2026-01-09 23:57:05,434 | INFO     | ready for new job
[2026-01-09 18:58:08] 2026-01-09 23:57:05,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:58:08] 2026-01-09 23:57:05,436 | INFO     | ***************************************
[2026-01-09 18:58:08] 2026-01-09 23:57:05,437 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:58:08] 2026-01-09 23:57:05,437 | INFO     | ***************************************
[2026-01-09 18:58:08] 2026-01-09 23:57:05,437 | INFO     | 
[2026-01-09 18:58:08] 2026-01-09 23:57:05,441 | INFO     | architecture information:
[2026-01-09 18:58:08] 2026-01-09 23:57:05,441 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:58:08] 2026-01-09 23:57:05,457 | INFO     | cat /etc/os-release:
[2026-01-09 18:58:08] NAME="CentOS Linux"
[2026-01-09 18:58:08] VERSION="7 (Core)"
[2026-01-09 18:58:08] ID="centos"
[2026-01-09 18:58:08] ID_LIKE="rhel fedora"
[2026-01-09 18:58:08] VERSION_ID="7"
[2026-01-09 18:58:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:58:08] ANSI_COLOR="0;31"
[2026-01-09 18:58:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:58:08] HOME_URL="https://www.centos.org/"
[2026-01-09 18:58:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:58:08] 
[2026-01-09 18:58:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:58:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:58:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:58:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:58:08] 
[2026-01-09 18:58:08] 2026-01-09 23:57:05,457 | INFO     | ***************************************
[2026-01-09 18:58:08] 2026-01-09 23:57:05,961 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:58:08] 2026-01-09 23:57:05,989 | INFO     | sufficient remaining disk space (75585552384 B)
[2026-01-09 18:58:08] 2026-01-09 23:57:05,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:58:08] 2026-01-09 23:57:05,989 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:58:08] 2026-01-09 23:57:05,990 | INFO     | update_server=False
[2026-01-09 18:58:08] 2026-01-09 23:57:05,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:58:08] 2026-01-09 23:57:05,990 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:58:08] 2026-01-09 23:57:05,991 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:58:08] 2026-01-09 23:57:05,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:58:08] 2026-01-09 23:57:05,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:58:08] 2026-01-09 23:57:05,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:58:08] 2026-01-09 23:57:06,074 | INFO     | all data control threads have been joined
[2026-01-09 18:58:08] 2026-01-09 23:57:06,259 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:58:08] 2026-01-09 23:57:06,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:58:08] 2026-01-09 23:57:06,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:58:08] 2026-01-09 23:57:06,260 | INFO     | will abort loop
[2026-01-09 18:58:08] 2026-01-09 23:57:06,996 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,081 | INFO     | [data] control thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,091 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,250 | INFO     | all job control threads have been joined
[2026-01-09 18:58:08] 2026-01-09 23:57:07,266 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,283 | INFO     | all payload control threads have been joined
[2026-01-09 18:58:08] 2026-01-09 23:57:07,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,800 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,885 | INFO     | [job] validate thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:07,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:58:08] 2026-01-09 23:57:07,998 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,149 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,257 | INFO     | [job] control thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,257 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,289 | INFO     | [payload] control thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,364 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:58:08] 2026-01-09 23:57:08,559 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:08,946 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:57:12,542 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:58:08] 2026-01-09 23:58:02,670 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:58:08] 2026-01-09 23:58:03,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660249646912)>', '<ExcThread(monitor, started 140659876935424)>']
[2026-01-09 18:58:08] 2026-01-09 23:58:03,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:58:08] 2026-01-09 23:58:03,379 | INFO     | [monitor] control thread has ended
[2026-01-09 18:58:08] 2026-01-09 23:58:08,137 | INFO     | all workflow threads have been joined
[2026-01-09 18:58:08] 2026-01-09 23:58:08,138 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:58:08] 2026-01-09 23:58:08,138 | INFO     | traces error code: 0
[2026-01-09 18:58:08] 2026-01-09 23:58:08,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:58:08] 2026-01-09 23:58:08,300 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:58:08] 2026-01-09 23:58:08,303 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:58:08] 2026-01-09 23:58:08,305 [wrapper] pilotpid: 2251766
[2026-01-09 18:58:08] 2026-01-09 23:58:08,308 [wrapper] Pilot exit status: 0
[2026-01-09 18:58:08] 2026-01-09 23:58:08,523 [wrapper] pandaids: 6963165597
[2026-01-09 18:58:08] 2026-01-09 23:58:08,595 [wrapper] cleanup supervisor_pilot 2961048 2251767
[2026-01-09 18:58:08] 2026-01-09 23:58:08,609 [wrapper] Test setup, not cleaning
[2026-01-09 18:58:08] 2026-01-09 23:58:08,632 [wrapper] apfmon messages muted
[2026-01-09 18:58:08] 2026-01-09 23:58:08,688 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:58:08] 2026-01-09 23:58:08,692 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:58:08]  *** Error codes and diagnostics ***
[2026-01-09 18:58:08]     "exeErrorCode": 0,
[2026-01-09 18:58:08]     "exeErrorDiag": "",
[2026-01-09 18:58:08]     "pilotErrorCode": 0,
[2026-01-09 18:58:08]     "pilotErrorDiag": "",
[2026-01-09 18:58:08]  *** Listing of results directory ***
[2026-01-09 18:58:08] total 442808
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 18:58:08] -rwx------. 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:58:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:14 run_atlas
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:14 job.xml
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas 226913115 Jan  9 13:14 EVNT.47898824._001348.pool.root.1
[2026-01-09 18:58:08] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:14 shared
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas    610545 Jan  9 13:14 input.tar.gz
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:14 start_atlas.sh
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:14 boinc_lockfile
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 13:14 pandaJob.out
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas        57 Jan  9 13:14 setup.sh.local
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas    989356 Jan  9 13:15 agis_schedconf.cvmfs.json
[2026-01-09 18:58:08] drwx------. 7 boincer umatlas      4096 Jan  9 13:15 pilot3
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas 216181408 Jan  9 18:56 HITS.47898826._034816.pool.root.1
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas      6840 Jan  9 18:56 init_data.xml
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas       531 Jan  9 18:56 boinc_task_state.xml
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas        95 Jan  9 18:56 pilot_heartbeat.json
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas      1040 Jan  9 18:56 memory_monitor_summary.json
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas    587993 Jan  9 18:56 log.47898826._034816.job.log.tgz.1
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas      7826 Jan  9 18:57 heartbeat.json
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:57 boinc_mmap_file
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas        28 Jan  9 18:57 wrapper_checkpoint.txt
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas      4738 Jan  9 18:58 pilotlog.txt
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas   2605990 Jan  9 18:58 log.47898826._034816.job.log.1
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas       357 Jan  9 18:58 output.list
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:58 runtime_log
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas   3215360 Jan  9 18:58 result.tar.gz
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas       658 Jan  9 18:58 wyvLDmM1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmylKDmUCb5Ro.diag
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas      9350 Jan  9 18:58 runtime_log.err
[2026-01-09 18:58:08] -rw-r--r--. 1 boincer umatlas     21432 Jan  9 18:58 stderr.txt
[2026-01-09 18:58:08] HITS file was successfully produced:
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas 216181408 Jan  9 18:56 shared/HITS.pool.root.1
[2026-01-09 18:58:08]  *** Contents of shared directory: ***
[2026-01-09 18:58:08] total 436472
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas 226913115 Jan  9 13:14 ATLAS.root_0
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas    610545 Jan  9 13:14 input.tar.gz
[2026-01-09 18:58:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:14 start_atlas.sh
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas 216181408 Jan  9 18:56 HITS.pool.root.1
[2026-01-09 18:58:08] -rw-------. 1 boincer umatlas   3215360 Jan  9 18:58 result.tar.gz
18:58:10 (2247303): run_atlas exited; CPU time 55089.513009
18:58:10 (2247303): called boinc_finish(0)

</stderr_txt>
]]>

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