Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:08 (3714367): wrapper (7.7.26015): starting
07:46:08 (3714367): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 07:46:08] Arguments: --nthreads 3
[2026-01-10 07:46:08] Threads: 3
[2026-01-10 07:46:08] Checking for CVMFS
[2026-01-10 07:46:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:46:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:46:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:46:09] 2.9.2.0 2900183 3331 84884 154970 0 57 21261573 36864000 0 130560 0 2059295 99.988 120952 6427 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 07:46:09] CVMFS is ok
[2026-01-10 07:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 07:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 07:46:09] Further information can be found at the LHC@home message board.
[2026-01-10 07:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:46:09] Checking for apptainer binary...
[2026-01-10 07:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:46:09] Running /usr/bin/apptainer --version
[2026-01-10 07:46:09] apptainer version 1.4.1-1.1
[2026-01-10 07:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:46:09] thA312a
[2026-01-10 07:46:09] apptainer works
[2026-01-10 07:46:09] Set ATHENA_PROC_NUMBER=3
[2026-01-10 07:46:09] Set ATHENA_CORE_NUMBER=3
[2026-01-10 07:46:09] Starting ATLAS job with PandaID=6963162615
[2026-01-10 07:46:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:38:28]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:38:28] 2026-01-10 08:37:57,022 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:38:28] 2026-01-10 08:37:57,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:38:28] 2026-01-10 08:37:57,024 | INFO     | did not find any defunct processes belonging to 3724552
[2026-01-10 09:38:28] 2026-01-10 08:37:57,025 | INFO     | did not find any defunct processes belonging to 3724552
[2026-01-10 09:38:28] 2026-01-10 08:37:57,025 | INFO     | ready for new job
[2026-01-10 09:38:28] 2026-01-10 08:37:57,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | ***************************************
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | ***************************************
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | 
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | architecture information:
[2026-01-10 09:38:28] 2026-01-10 08:37:57,026 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:38:28] 2026-01-10 08:37:57,037 | INFO     | cat /etc/os-release:
[2026-01-10 09:38:28] NAME="CentOS Linux"
[2026-01-10 09:38:28] VERSION="7 (Core)"
[2026-01-10 09:38:28] ID="centos"
[2026-01-10 09:38:28] ID_LIKE="rhel fedora"
[2026-01-10 09:38:28] VERSION_ID="7"
[2026-01-10 09:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:38:28] ANSI_COLOR="0;31"
[2026-01-10 09:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:38:28] HOME_URL="https://www.centos.org/"
[2026-01-10 09:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:38:28] 
[2026-01-10 09:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:38:28] 
[2026-01-10 09:38:28] 2026-01-10 08:37:57,037 | INFO     | ***************************************
[2026-01-10 09:38:28] 2026-01-10 08:37:57,540 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 09:38:28] 2026-01-10 08:37:57,554 | INFO     | sufficient remaining disk space (284105375744 B)
[2026-01-10 09:38:28] 2026-01-10 08:37:57,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:38:28] 2026-01-10 08:37:57,555 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:38:28] 2026-01-10 08:37:57,555 | INFO     | update_server=False
[2026-01-10 09:38:28] 2026-01-10 08:37:57,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:38:28] 2026-01-10 08:37:57,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:28] 2026-01-10 08:37:57,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:38:28] 2026-01-10 08:37:58,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:28] 2026-01-10 08:37:58,004 | INFO     | aborting loop
[2026-01-10 09:38:28] 2026-01-10 08:37:58,059 | INFO     | all data control threads have been joined
[2026-01-10 09:38:28] 2026-01-10 08:37:58,152 | INFO     | all job control threads have been joined
[2026-01-10 09:38:28] 2026-01-10 08:37:58,561 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:58,561 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:58,794 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:58,796 | INFO     | all payload control threads have been joined
[2026-01-10 09:38:28] 2026-01-10 08:37:59,010 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,065 | INFO     | [data] control thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,158 | INFO     | [job] control thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,321 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:38:28] 2026-01-10 08:37:59,599 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,802 | INFO     | [payload] control thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,802 | INFO     | [job] validate thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,818 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,929 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:37:59,955 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:38:03,487 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:38:08,534 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:38:28] 2026-01-10 08:38:09,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:38:28] 2026-01-10 08:38:22,295 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:38:28] 2026-01-10 08:38:23,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841091893056)>', '<ExcThread(monitor, started 139840729356032)>']
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | INFO     | PID=3718094 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:38:28] 2026-01-10 08:38:27,450 | INFO     | [monitor] control thread has ended
[2026-01-10 09:38:28] 2026-01-10 08:38:28,558 | INFO     | all workflow threads have been joined
[2026-01-10 09:38:28] 2026-01-10 08:38:28,559 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:38:28] 2026-01-10 08:38:28,559 | INFO     | traces error code: 0
[2026-01-10 09:38:28] 2026-01-10 08:38:28,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:38:28] 2026-01-10 08:38:28,611 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:38:28] 2026-01-10 08:38:28,614 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:38:28] 2026-01-10 08:38:28,616 [wrapper] pilotpid: 3718094
[2026-01-10 09:38:28] 2026-01-10 08:38:28,619 [wrapper] Pilot exit status: 0
[2026-01-10 09:38:28] 2026-01-10 08:38:28,627 [wrapper] pandaids: 6963162615
[2026-01-10 09:38:28] 2026-01-10 08:38:28,646 [wrapper] cleanup supervisor_pilot 3739650 3718095
[2026-01-10 09:38:28] 2026-01-10 08:38:28,649 [wrapper] Test setup, not cleaning
[2026-01-10 09:38:28] 2026-01-10 08:38:28,651 [wrapper] apfmon messages muted
[2026-01-10 09:38:28] 2026-01-10 08:38:28,653 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:38:28] 2026-01-10 08:38:28,656 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:38:28]  *** Error codes and diagnostics ***
[2026-01-10 09:38:28]     "exeErrorCode": 0,
[2026-01-10 09:38:28]     "exeErrorDiag": "",
[2026-01-10 09:38:28]     "pilotErrorCode": 0,
[2026-01-10 09:38:28]     "pilotErrorDiag": "",
[2026-01-10 09:38:28]  *** Listing of results directory ***
[2026-01-10 09:38:28] total 442456
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 09:38:28] -rwx------ 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc       100 Jan 10 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:38:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 07:46 run_atlas
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc       105 Jan 10 07:46 job.xml
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc 226080778 Jan 10 07:46 EVNT.47898824._001302.pool.root.1
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc    592404 Jan 10 07:46 input.tar.gz
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc     15847 Jan 10 07:46 start_atlas.sh
[2026-01-10 09:38:28] drwxrwx--x 2 boinc boinc      4096 Jan 10 07:46 shared
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc         0 Jan 10 07:46 boinc_setup_complete
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc      6447 Jan 10 07:46 init_data.xml
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc         0 Jan 10 07:46 boinc_lockfile
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc      2520 Jan 10 07:46 pandaJob.out
[2026-01-10 09:38:28] -rw------- 1 boinc boinc    989374 Jan 10 07:46 agis_schedconf.cvmfs.json
[2026-01-10 09:38:28] -rw------- 1 boinc boinc   1516240 Jan 10 07:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:38:28] drwx------ 5 boinc boinc      4096 Jan 10 07:46 pilot3
[2026-01-10 09:38:28] -rw------- 1 boinc boinc 220567892 Jan 10 09:37 HITS.47898826._034171.pool.root.1
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc       530 Jan 10 09:37 boinc_task_state.xml
[2026-01-10 09:38:28] -rw------- 1 boinc boinc      1019 Jan 10 09:37 memory_monitor_summary.json
[2026-01-10 09:38:28] -rw------- 1 boinc boinc    292808 Jan 10 09:37 log.47898826._034171.job.log.tgz.1
[2026-01-10 09:38:28] -rw------- 1 boinc boinc        95 Jan 10 09:37 pilot_heartbeat.json
[2026-01-10 09:38:28] -rw------- 1 boinc boinc      7751 Jan 10 09:37 heartbeat.json
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc      8192 Jan 10 09:38 boinc_mmap_file
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc        27 Jan 10 09:38 wrapper_checkpoint.txt
[2026-01-10 09:38:28] -rw------- 1 boinc boinc      4824 Jan 10 09:38 pilotlog.txt
[2026-01-10 09:38:28] -rw------- 1 boinc boinc    966945 Jan 10 09:38 log.47898826._034171.job.log.1
[2026-01-10 09:38:28] -rw------- 1 boinc boinc       357 Jan 10 09:38 output.list
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc       620 Jan 10 09:38 runtime_log
[2026-01-10 09:38:28] -rw------- 1 boinc boinc   1280000 Jan 10 09:38 result.tar.gz
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc      8902 Jan 10 09:38 runtime_log.err
[2026-01-10 09:38:28] -rw------- 1 boinc boinc       660 Jan 10 09:38 fXqNDmx0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5vlKDmZ3Fb5n.diag
[2026-01-10 09:38:28] -rw-r--r-- 1 boinc boinc     10065 Jan 10 09:38 stderr.txt
[2026-01-10 09:38:28] HITS file was successfully produced:
[2026-01-10 09:38:28] -rw------- 1 boinc boinc 220567892 Jan 10 09:37 shared/HITS.pool.root.1
[2026-01-10 09:38:28]  *** Contents of shared directory: ***
[2026-01-10 09:38:28] total 438040
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc 226080778 Jan 10 07:46 ATLAS.root_0
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc    592404 Jan 10 07:46 input.tar.gz
[2026-01-10 09:38:28] -rw-r--r-- 2 boinc boinc     15847 Jan 10 07:46 start_atlas.sh
[2026-01-10 09:38:28] -rw------- 1 boinc boinc 220567892 Jan 10 09:37 HITS.pool.root.1
[2026-01-10 09:38:28] -rw------- 1 boinc boinc   1280000 Jan 10 09:38 result.tar.gz
09:38:29 (3714367): run_atlas exited; CPU time 19333.355484
09:38:29 (3714367): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN