Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:47:22 (2052054): wrapper (7.7.26015): starting
12:47:22 (2052054): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 12:47:22] Arguments: --nthreads 11
[2026-01-09 12:47:22] Threads: 11
[2026-01-09 12:47:22] Checking for CVMFS
[2026-01-09 12:47:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:47:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:47:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:47:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:47:24] 2.13.3.0 9597 22977 126448 154951 2 140 40847774 40960000 30235 16776704 0 109708173 99.653 97566658 46933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 12:47:24] CVMFS is ok
[2026-01-09 12:47:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:47:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:47:24] Further information can be found at the LHC@home message board.
[2026-01-09 12:47:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:47:24] Checking for apptainer binary...
[2026-01-09 12:47:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:47:24] Running /usr/bin/apptainer --version
[2026-01-09 12:47:24] apptainer version 1.4.5-2.el9
[2026-01-09 12:47:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:47:45] c-208-38.aglt2.org
[2026-01-09 12:47:45] apptainer works
[2026-01-09 12:47:45] Set ATHENA_PROC_NUMBER=11
[2026-01-09 12:47:45] Set ATHENA_CORE_NUMBER=11
[2026-01-09 12:47:45] Starting ATLAS job with PandaID=6963162408
[2026-01-09 12:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:19:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:19:23] 2026-01-09 19:18:19,239 | INFO     | monitor loop #367: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:19,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:20,475 | INFO     | time since job start (5351s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:21,744 | INFO     | monitor loop #368: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:21,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:22,488 | INFO     | time since job start (5353s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:22,488 | INFO     | 5363s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 14:19:23] 2026-01-09 19:18:24,249 | INFO     | monitor loop #369: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:24,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:24,495 | INFO     | time since job start (5355s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:26,502 | INFO     | time since job start (5357s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:26,754 | INFO     | monitor loop #370: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:26,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:28,512 | INFO     | time since job start (5359s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:29,258 | INFO     | monitor loop #371: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:29,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:30,422 | INFO     | PID=2060947 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:19:23] 2026-01-09 19:18:30,423 | INFO     | .. there are 26 such processes running
[2026-01-09 14:19:23] 2026-01-09 19:18:31,440 | INFO     | time since job start (5362s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:31,763 | INFO     | monitor loop #372: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:31,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:33,447 | INFO     | time since job start (5364s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:34,274 | INFO     | monitor loop #373: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:34,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:35,460 | INFO     | time since job start (5366s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:36,779 | INFO     | monitor loop #374: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:36,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:37,467 | INFO     | time since job start (5368s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:39,288 | INFO     | monitor loop #375: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:39,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:39,474 | INFO     | time since job start (5370s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:41,481 | INFO     | time since job start (5372s) is within the limit (349056.0s)
[2026-01-09 14:19:23] 2026-01-09 19:18:41,793 | INFO     | monitor loop #376: job 0:6963162408 is in state 'finished'
[2026-01-09 14:19:23] 2026-01-09 19:18:41,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:19:23] 2026-01-09 19:18:42,776 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:19:23] 2026-01-09 19:18:42,784 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.4836406249997
[2026-01-09 14:19:23] 2026-01-09 19:18:42,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162408/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:19:23] 2026-01-09 19:18:42,856 | INFO     | extracted standard info from prmon json
[2026-01-09 14:19:23] 2026-01-09 19:18:42,856 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:19:23] 2026-01-09 19:18:42,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:19:23] 2026-01-09 19:18:42,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:19:23] 2026-01-09 19:18:42,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | sum of square deviations: 147126479.5
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | sum of deviations: -2144178243.0000002
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | mean x: 1767983769.5
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | mean y: 2677305.487179487
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | intersect: 25768755209.4924
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | chi2: 0.22419946364400126
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | current memory leak: -14.57 B/s (using 78 data points, chi2=0.22)
[2026-01-09 14:19:23] 2026-01-09 19:18:42,864 | INFO     | could have reported an average CPU frequency of 3781 MHz (6 samples)
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | ..............................
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . Timing measurements:
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . get job = 0 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . initial setup = 9 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . payload setup = 59 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . stage-in = 0 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . payload execution = 5201 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . stage-out = 1 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | . log creation = 0 s
[2026-01-09 14:19:23] 2026-01-09 19:18:42,865 | INFO     | ..............................
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | 
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | job summary report
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | --------------------------------------------------
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | PanDA job id: 6963162408
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | task id: 47898826
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | errors: (none)
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | pilot state: finished 
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | transexitcode: 0
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | exeerrorcode: 0
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | exeerrordiag: 
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | exitcode: 0
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | exitmsg: OK
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | cpuconsumptiontime: 31354 s
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | nevents: 400
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | neventsw: 0
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | pid: 2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | pgrp: 2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | corecount: 11
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | event service: False
[2026-01-09 14:19:23] 2026-01-09 19:18:43,013 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2283999, 22: 2284027, 33: 2284055, 40: 2284373, 44: 2284529, 5265: 2311089, 5267: 2320143, 5297: 2320281}
[2026-01-09 14:19:23] 2026-01-09 19:18:43,014 | INFO     | --------------------------------------------------
[2026-01-09 14:19:23] 2026-01-09 19:18:43,014 | INFO     | 
[2026-01-09 14:19:23] 2026-01-09 19:18:43,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | job 6963162408 has completed (purged errors)
[2026-01-09 14:19:23] 2026-01-09 19:18:43,235 | INFO     | overall cleanup function is called
[2026-01-09 14:19:23] 2026-01-09 19:18:44,242 | INFO     | --- collectZombieJob: --- 10, [2076828]
[2026-01-09 14:19:23] 2026-01-09 19:18:44,243 | INFO     | zombie collector waiting for pid 2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:44,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:19:23] 2026-01-09 19:18:44,243 | INFO     | collected zombie processes
[2026-01-09 14:19:23] 2026-01-09 19:18:44,243 | INFO     | will attempt to kill all subprocesses of pid=2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:44,817 | INFO     | process IDs to be killed: [2076828] (in reverse order)
[2026-01-09 14:19:23] 2026-01-09 19:18:45,448 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:19:23] 2026-01-09 19:18:45,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:19:23] 2026-01-09 19:18:45,542 | INFO     | did not find any defunct processes belonging to 2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:45,624 | INFO     | did not find any defunct processes belonging to 2076828
[2026-01-09 14:19:23] 2026-01-09 19:18:45,624 | INFO     | ready for new job
[2026-01-09 14:19:23] 2026-01-09 19:18:45,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:19:23] 2026-01-09 19:18:45,626 | INFO     | ***************************************
[2026-01-09 14:19:23] 2026-01-09 19:18:45,626 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:19:23] 2026-01-09 19:18:45,626 | INFO     | ***************************************
[2026-01-09 14:19:23] 2026-01-09 19:18:45,626 | INFO     | 
[2026-01-09 14:19:23] 2026-01-09 19:18:45,640 | INFO     | architecture information:
[2026-01-09 14:19:23] 2026-01-09 19:18:45,651 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:19:23] 2026-01-09 19:18:45,764 | INFO     | cat /etc/os-release:
[2026-01-09 14:19:23] NAME="CentOS Linux"
[2026-01-09 14:19:23] VERSION="7 (Core)"
[2026-01-09 14:19:23] ID="centos"
[2026-01-09 14:19:23] ID_LIKE="rhel fedora"
[2026-01-09 14:19:23] VERSION_ID="7"
[2026-01-09 14:19:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:19:23] ANSI_COLOR="0;31"
[2026-01-09 14:19:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:19:23] HOME_URL="https://www.centos.org/"
[2026-01-09 14:19:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:19:23] 
[2026-01-09 14:19:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:19:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:19:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:19:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:19:23] 
[2026-01-09 14:19:23] 2026-01-09 19:18:45,764 | INFO     | ***************************************
[2026-01-09 14:19:23] 2026-01-09 19:18:46,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 14:19:23] 2026-01-09 19:18:46,318 | INFO     | sufficient remaining disk space (170518380544 B)
[2026-01-09 14:19:23] 2026-01-09 19:18:46,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:19:23] 2026-01-09 19:18:46,318 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:19:23] 2026-01-09 19:18:46,318 | INFO     | update_server=False
[2026-01-09 14:19:23] 2026-01-09 19:18:46,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:19:23] 2026-01-09 19:18:46,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:19:23] 2026-01-09 19:18:46,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:19:23] 2026-01-09 19:18:46,826 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:19:23] 2026-01-09 19:18:46,829 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:19:23] 2026-01-09 19:18:46,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:19:23] 2026-01-09 19:18:46,829 | INFO     | will abort loop
[2026-01-09 14:19:23] 2026-01-09 19:18:46,891 | INFO     | all data control threads have been joined
[2026-01-09 14:19:23] 2026-01-09 19:18:47,325 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,391 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,414 | INFO     | all payload control threads have been joined
[2026-01-09 14:19:23] 2026-01-09 19:18:47,437 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,503 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,534 | INFO     | [job] validate thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,836 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:47,875 | INFO     | all job control threads have been joined
[2026-01-09 14:19:23] 2026-01-09 19:18:47,897 | INFO     | [data] control thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:19:23] 2026-01-09 19:18:48,326 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,421 | INFO     | [payload] control thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,491 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,657 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,882 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:48,886 | INFO     | [job] control thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:49,034 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:50,166 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-09 14:19:23] 2026-01-09 19:18:50,329 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:18:57,127 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:19:23] 2026-01-09 19:18:58,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:19:23] 2026-01-09 19:19:15,473 | INFO     | PID=2060947 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:19:23] 2026-01-09 19:19:15,473 | INFO     | .. there are 26 such processes running
[2026-01-09 14:19:23] 2026-01-09 19:19:15,473 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:19:23] 2026-01-09 19:19:15,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:19:23] 2026-01-09 19:19:15,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:19:23] 2026-01-09 19:19:16,957 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:19:23] 2026-01-09 19:19:17,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598171559744)>', '<ExcThread(monitor, started 140597818021632)>']
[2026-01-09 14:19:23] 2026-01-09 19:19:17,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:19:23] 2026-01-09 19:19:17,486 | INFO     | [monitor] control thread has ended
[2026-01-09 14:19:23] 2026-01-09 19:19:22,136 | INFO     | all workflow threads have been joined
[2026-01-09 14:19:23] 2026-01-09 19:19:22,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:19:23] 2026-01-09 19:19:22,136 | INFO     | traces error code: 0
[2026-01-09 14:19:23] 2026-01-09 19:19:22,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:19:23] 2026-01-09 19:19:22,404 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:19:23] 2026-01-09 19:19:22,418 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:19:23] 2026-01-09 19:19:22,435 [wrapper] pilotpid: 2060947
[2026-01-09 14:19:23] 2026-01-09 19:19:22,454 [wrapper] Pilot exit status: 0
[2026-01-09 14:19:23] 2026-01-09 19:19:22,565 [wrapper] pandaids: 6963162408
[2026-01-09 14:19:23] 2026-01-09 19:19:22,685 [wrapper] cleanup supervisor_pilot 2518903 2060948
[2026-01-09 14:19:23] 2026-01-09 19:19:22,704 [wrapper] Test setup, not cleaning
[2026-01-09 14:19:23] 2026-01-09 19:19:22,719 [wrapper] apfmon messages muted
[2026-01-09 14:19:23] 2026-01-09 19:19:22,743 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:19:23] 2026-01-09 19:19:22,766 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:19:23]  *** Error codes and diagnostics ***
[2026-01-09 14:19:23]     "exeErrorCode": 0,
[2026-01-09 14:19:23]     "exeErrorDiag": "",
[2026-01-09 14:19:23]     "pilotErrorCode": 0,
[2026-01-09 14:19:23]     "pilotErrorDiag": "",
[2026-01-09 14:19:23]  *** Listing of results directory ***
[2026-01-09 14:19:23] total 444724
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:19:23] -rwx------. 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:01 queuedata.json
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:19:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:47 run_atlas
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:47 job.xml
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas 225925878 Jan  9 12:47 EVNT.47898824._001297.pool.root.1
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:47 start_atlas.sh
[2026-01-09 14:19:23] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:47 shared
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 12:47 input.tar.gz
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:47 boinc_lockfile
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:47 pandaJob.out
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas        57 Jan  9 12:47 setup.sh.local
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas    989356 Jan  9 12:49 agis_schedconf.cvmfs.json
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:19:23] drwx------. 5 boincer umatlas      4096 Jan  9 12:49 pilot3
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas      7185 Jan  9 14:13 init_data.xml
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas 223349134 Jan  9 14:17 HITS.47898826._034029.pool.root.1
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:17 boinc_task_state.xml
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas      1044 Jan  9 14:18 memory_monitor_summary.json
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas    372642 Jan  9 14:18 log.47898826._034029.job.log.tgz.1
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas        95 Jan  9 14:18 pilot_heartbeat.json
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas      7806 Jan  9 14:18 heartbeat.json
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:19 boinc_mmap_file
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas        27 Jan  9 14:19 wrapper_checkpoint.txt
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas      5083 Jan  9 14:19 pilotlog.txt
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas    732730 Jan  9 14:19 log.47898826._034029.job.log.1
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas       357 Jan  9 14:19 output.list
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:19 runtime_log
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas   1126400 Jan  9 14:19 result.tar.gz
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas      9344 Jan  9 14:19 runtime_log.err
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas       657 Jan  9 14:19 PfFMDmx0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvggKDm01kbCn.diag
[2026-01-09 14:19:23] -rw-r--r--. 1 boincer umatlas     22355 Jan  9 14:19 stderr.txt
[2026-01-09 14:19:23] HITS file was successfully produced:
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas 223349134 Jan  9 14:17 shared/HITS.pool.root.1
[2026-01-09 14:19:23]  *** Contents of shared directory: ***
[2026-01-09 14:19:23] total 440448
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas 225925878 Jan  9 12:47 ATLAS.root_0
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:47 start_atlas.sh
[2026-01-09 14:19:23] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 12:47 input.tar.gz
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas 223349134 Jan  9 14:17 HITS.pool.root.1
[2026-01-09 14:19:23] -rw-------. 1 boincer umatlas   1126400 Jan  9 14:19 result.tar.gz
14:19:45 (2052054): run_atlas exited; CPU time 31503.996183
14:19:45 (2052054): called boinc_finish(0)

</stderr_txt>
]]>

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