Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:14 (1318483): wrapper (7.7.26015): starting
08:53:14 (1318483): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 08:53:14] Arguments: --nthreads 12
[2026-01-09 08:53:14] Threads: 12
[2026-01-09 08:53:14] Checking for CVMFS
[2026-01-09 08:53:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:53:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:53:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:53:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:53:16] 2.11.5.0 113174 56801 198388 154950 1 445 29389540 45568001 17945 130560 0 392888485 99.796 241286454 20753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 08:53:16] CVMFS is ok
[2026-01-09 08:53:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:53:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:53:16] Further information can be found at the LHC@home message board.
[2026-01-09 08:53:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:53:16] Checking for apptainer binary...
[2026-01-09 08:53:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:53:16] Running /usr/bin/apptainer --version
[2026-01-09 08:53:16] apptainer version 1.4.1-1.el9
[2026-01-09 08:53:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:53:17] wns0038.triumf.lcg
[2026-01-09 08:53:17] apptainer works
[2026-01-09 08:53:17] Set ATHENA_PROC_NUMBER=12
[2026-01-09 08:53:17] Set ATHENA_CORE_NUMBER=12
[2026-01-09 08:53:17] Starting ATLAS job with PandaID=6963381681
[2026-01-09 08:53:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:58:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | WARNING  | wrong length of table data, x=[1767977681.0, 1767977742.0], y=[2112.0, 372929.0] (must be same and length>=4)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . Timing measurements:
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . get job = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . initial setup = 4 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload setup = 11 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-in = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload execution = 95 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-out = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . log creation = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381681/pilotlog.txt
[2026-01-09 08:58:48] 2026-01-09 16:58:14,371 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:58:48] - Log from pilotlog.txt -
[2026-01-09 08:58:48] 2026-01-09 16:58:14,299 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381681/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | INFO     | extracted standard info from prmon json
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | WARNING  | wrong length of table data, x=[1767977681.0, 1767977742.0], y=[2112.0, 372929.0] (must be same and length>=4)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . Timing measurements:
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . get job = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . initial setup = 4 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload setup = 11 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-in = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload execution = 95 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-out = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . log creation = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381681/pilotlog.txt
[2026-01-09 08:58:48] 2026-01-09 16:58:14,371 | WARNING  | 
[2026-01-09 08:58:48] [begin log extracts]
[2026-01-09 08:58:48] - Log from pilotlog.txt -
[2026-01-09 08:58:48] 2026-01-09 16:58:14,299 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381681/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | INFO     | extracted standard info from prmon json
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:58:48] 2026-01-09 16:58:14,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:58:48] 2026-01-09 16:58:14,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | WARNING  | wrong length of table data, x=[1767977681.0, 1767977742.0], y=[2112.0, 372929.0] (must be same and length>=4)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,328 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . Timing measurements:
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . get job = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . initial setup = 4 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload setup = 11 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-in = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . payload execution = 95 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . stage-out = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | . log creation = 0 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | ..............................
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:58:48] 2026-01-09 16:58:14,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381681/pilotlog.txt
[2026-01-09 08:58:48] [end log extracts]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,372 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,372 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:58:48] 2026-01-09 16:58:14,426 | INFO     | 
[2026-01-09 08:58:48] 2026-01-09 16:58:14,426 | INFO     | job summary report
[2026-01-09 08:58:48] 2026-01-09 16:58:14,426 | INFO     | --------------------------------------------------
[2026-01-09 08:58:48] 2026-01-09 16:58:14,426 | INFO     | PanDA job id: 6963381681
[2026-01-09 08:58:48] 2026-01-09 16:58:14,426 | INFO     | task id: 47962010
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 08:55:57,215 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | pilot state: failed 
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | transexitcode: 65
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | exeerrorcode: 65
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | exitcode: 65
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | cpuconsumptiontime: 40 s
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | nevents: 0
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | neventsw: 0
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | pid: 1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | pgrp: 1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | corecount: 12
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | event service: False
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | sizes: {0: 2284621, 11: 2284621, 20: 2284911, 22: 2284939, 110: 2310348, 111: 2314794, 238: 2314932}
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | --------------------------------------------------
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | 
[2026-01-09 08:58:48] 2026-01-09 16:58:14,427 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:58:48] 2026-01-09 16:58:14,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:58:48] 2026-01-09 16:58:14,442 | INFO     | job 6963381681 has completed (purged errors)
[2026-01-09 08:58:48] 2026-01-09 16:58:14,442 | INFO     | overall cleanup function is called
[2026-01-09 08:58:48] 2026-01-09 16:58:15,466 | INFO     | --- collectZombieJob: --- 10, [1328833]
[2026-01-09 08:58:48] 2026-01-09 16:58:15,466 | INFO     | zombie collector waiting for pid 1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:15,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:58:48] 2026-01-09 16:58:15,466 | INFO     | collected zombie processes
[2026-01-09 08:58:48] 2026-01-09 16:58:15,466 | INFO     | will attempt to kill all subprocesses of pid=1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:16,644 | INFO     | process IDs to be killed: [1328833] (in reverse order)
[2026-01-09 08:58:48] 2026-01-09 16:58:17,073 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:58:48] 2026-01-09 16:58:17,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:58:48] 2026-01-09 16:58:17,081 | INFO     | did not find any defunct processes belonging to 1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:17,109 | INFO     | did not find any defunct processes belonging to 1328833
[2026-01-09 08:58:48] 2026-01-09 16:58:17,109 | INFO     | ready for new job
[2026-01-09 08:58:48] 2026-01-09 16:58:17,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:58:48] 2026-01-09 16:58:17,110 | INFO     | ***************************************
[2026-01-09 08:58:48] 2026-01-09 16:58:17,110 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:58:48] 2026-01-09 16:58:17,111 | INFO     | ***************************************
[2026-01-09 08:58:48] 2026-01-09 16:58:17,111 | INFO     | 
[2026-01-09 08:58:48] 2026-01-09 16:58:17,122 | INFO     | architecture information:
[2026-01-09 08:58:48] 2026-01-09 16:58:17,122 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:58:48] 2026-01-09 16:58:17,349 | INFO     | cat /etc/os-release:
[2026-01-09 08:58:48] NAME="CentOS Linux"
[2026-01-09 08:58:48] VERSION="7 (Core)"
[2026-01-09 08:58:48] ID="centos"
[2026-01-09 08:58:48] ID_LIKE="rhel fedora"
[2026-01-09 08:58:48] VERSION_ID="7"
[2026-01-09 08:58:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:58:48] ANSI_COLOR="0;31"
[2026-01-09 08:58:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:58:48] HOME_URL="https://www.centos.org/"
[2026-01-09 08:58:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:58:48] 
[2026-01-09 08:58:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:58:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:58:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:58:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:58:48] 
[2026-01-09 08:58:48] 2026-01-09 16:58:17,350 | INFO     | ***************************************
[2026-01-09 08:58:48] 2026-01-09 16:58:17,853 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:58:48] 2026-01-09 16:58:17,899 | INFO     | sufficient remaining disk space (1845504245760 B)
[2026-01-09 08:58:48] 2026-01-09 16:58:17,900 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:58:48] 2026-01-09 16:58:17,900 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:58:48] 2026-01-09 16:58:17,900 | INFO     | update_server=False
[2026-01-09 08:58:48] 2026-01-09 16:58:17,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:58:48] 2026-01-09 16:58:17,963 | INFO     | all payload control threads have been joined
[2026-01-09 08:58:48] 2026-01-09 16:58:18,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:58:48] 2026-01-09 16:58:18,466 | INFO     | all data control threads have been joined
[2026-01-09 08:58:48] 2026-01-09 16:58:18,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:58:48] 2026-01-09 16:58:18,571 | INFO     | aborting loop
[2026-01-09 08:58:48] 2026-01-09 16:58:18,909 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:18,969 | INFO     | [payload] control thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:18,969 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,167 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,245 | INFO     | all job control threads have been joined
[2026-01-09 08:58:48] 2026-01-09 16:58:19,313 | INFO     | [job] validate thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,414 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,414 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:58:48] 2026-01-09 16:58:19,472 | INFO     | [data] control thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,490 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,490 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,577 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:19,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:58:48] 2026-01-09 16:58:20,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:20,191 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:20,251 | INFO     | [job] control thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:20,446 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:23,704 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:58:48] 2026-01-09 16:58:40,333 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:58:48] 2026-01-09 16:58:41,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703093618496)>', '<ExcThread(monitor, started 140702683997952)>']
[2026-01-09 08:58:48] 2026-01-09 16:58:46,502 | INFO     | PID=1322191 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:58:48] 2026-01-09 16:58:46,502 | INFO     | .. there are 27 such processes running
[2026-01-09 08:58:48] 2026-01-09 16:58:46,503 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:58:48] 2026-01-09 16:58:46,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:58:48] 2026-01-09 16:58:46,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:58:48] 2026-01-09 16:58:46,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:58:48] 2026-01-09 16:58:46,504 | INFO     | [monitor] control thread has ended
[2026-01-09 08:58:48] 2026-01-09 16:58:46,657 | INFO     | all workflow threads have been joined
[2026-01-09 08:58:48] 2026-01-09 16:58:46,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:58:48] 2026-01-09 16:58:46,657 | INFO     | traces error code: 0
[2026-01-09 08:58:48] 2026-01-09 16:58:46,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:58:48] 2026-01-09 16:58:47,046 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:58:48] 2026-01-09 16:58:47,076 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:58:48] 2026-01-09 16:58:47,078 [wrapper] pilotpid: 1322191
[2026-01-09 08:58:48] 2026-01-09 16:58:47,080 [wrapper] Pilot exit status: 0
[2026-01-09 08:58:48] 2026-01-09 16:58:47,216 [wrapper] pandaids: 6963381681
[2026-01-09 08:58:48] 2026-01-09 16:58:47,484 [wrapper] cleanup supervisor_pilot 1322197 1322192
[2026-01-09 08:58:48] 2026-01-09 16:58:47,498 [wrapper] Test setup, not cleaning
[2026-01-09 08:58:48] 2026-01-09 16:58:47,507 [wrapper] apfmon messages muted
[2026-01-09 08:58:48] 2026-01-09 16:58:47,520 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:58:48] 2026-01-09 16:58:47,535 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:58:48]  *** Error codes and diagnostics ***
[2026-01-09 08:58:48]     "exeErrorCode": 65,
[2026-01-09 08:58:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:58:48]     "pilotErrorCode": 1305,
[2026-01-09 08:58:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:58:48]  *** Listing of results directory ***
[2026-01-09 08:58:48] total 387944
[2026-01-09 08:58:48] -rwx------. 1 boinc boinc     36322 Jan  8 23:17 runpilot2-wrapper.sh
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:21 queuedata.json
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:58:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:53 run_atlas
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:53 job.xml
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc      6595 Jan  9 08:53 init_data.xml
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc 393052646 Jan  9 08:53 EVNT.47962006._000120.pool.root.1
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:53 start_atlas.sh
[2026-01-09 08:58:48] drwxrwx--x. 2 boinc boinc      4096 Jan  9 08:53 shared
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc    592619 Jan  9 08:53 input.tar.gz
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:53 boinc_lockfile
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc      2893 Jan  9 08:53 pandaJob.out
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc    989356 Jan  9 08:53 agis_schedconf.cvmfs.json
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc   1516240 Jan  9 08:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:58:48] drwx------. 5 boinc boinc      4096 Jan  9 08:53 pilot3
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc       524 Jan  9 08:55 boinc_task_state.xml
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc       985 Jan  9 08:56 memory_monitor_summary.json
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc     48465 Jan  9 08:56 log.47962010._001741.job.log.tgz.1
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc     10333 Jan  9 08:58 heartbeat.json
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:58 wrapper_checkpoint.txt
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc        95 Jan  9 08:58 pilot_heartbeat.json
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc      4823 Jan  9 08:58 pilotlog.txt
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc     97933 Jan  9 08:58 log.47962010._001741.job.log.1
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:58 boinc_mmap_file
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc       186 Jan  9 08:58 output.list
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:58 runtime_log
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc    163840 Jan  9 08:58 result.tar.gz
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc      8636 Jan  9 08:58 runtime_log.err
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc       645 Jan  9 08:58 MKvLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTdmKDmybPeQo.diag
[2026-01-09 08:58:48] -rw-r--r--. 1 boinc boinc     22350 Jan  9 08:58 stderr.txt
[2026-01-09 08:58:48] No HITS result produced
[2026-01-09 08:58:48]  *** Contents of shared directory: ***
[2026-01-09 08:58:48] total 384604
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc 393052646 Jan  9 08:53 ATLAS.root_0
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:53 start_atlas.sh
[2026-01-09 08:58:48] -rw-r--r--. 2 boinc boinc    592619 Jan  9 08:53 input.tar.gz
[2026-01-09 08:58:48] -rw-------. 1 boinc boinc    163840 Jan  9 08:58 result.tar.gz
08:58:50 (1318483): run_atlas exited; CPU time 43.493768
08:58:50 (1318483): called boinc_finish(0)

</stderr_txt>
]]>

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