Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:16 (31424): wrapper (7.7.26015): starting
20:35:16 (31424): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:35:16] Arguments: --nthreads 8
[2026-01-09 20:35:16] Threads: 8
[2026-01-09 20:35:16] Checking for CVMFS
[2026-01-09 20:35:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:35:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:35:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:35:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:35:16] 2.11.2.0 11184 35841 96424 154955 2 57 20504148 25165824 0 130560 0 15464331 99.823 10390918 3157 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:35:16] CVMFS is ok
[2026-01-09 20:35:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:35:16] Checking for apptainer binary...
[2026-01-09 20:35:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:35:16] Running /usr/bin/apptainer --version
[2026-01-09 20:35:16] apptainer version 1.3.2-1.el7
[2026-01-09 20:35:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:35:18] cg-vwn432.simple-grid.lan
[2026-01-09 20:35:18] apptainer works
[2026-01-09 20:35:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:35:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:35:18] Starting ATLAS job with PandaID=6963381632
[2026-01-09 20:35:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:58:41]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:58:41] 2026-01-10 19:57:52,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:58:41] 2026-01-10 19:57:52,963 | INFO     | time since job start (87738s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:57:54,975 | INFO     | time since job start (87740s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:57:55,456 | INFO     | monitor loop #5843: job 0:6963381632 is in state 'finished'
[2026-01-10 20:58:41] 2026-01-10 19:57:55,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:58:41] 2026-01-10 19:57:56,178 | INFO     | PID=2753 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 20:58:41] 2026-01-10 19:57:56,178 | INFO     | .. there are 2 such processes running
[2026-01-10 20:58:41] 2026-01-10 19:57:57,179 | INFO     | time since job start (87743s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:57:57,975 | INFO     | monitor loop #5844: job 0:6963381632 is in state 'finished'
[2026-01-10 20:58:41] 2026-01-10 19:57:57,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:58:41] 2026-01-10 19:57:59,186 | INFO     | time since job start (87745s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:58:00,481 | INFO     | monitor loop #5845: job 0:6963381632 is in state 'finished'
[2026-01-10 20:58:41] 2026-01-10 19:58:00,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:58:41] 2026-01-10 19:58:01,197 | INFO     | time since job start (87747s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:58:02,987 | INFO     | monitor loop #5846: job 0:6963381632 is in state 'finished'
[2026-01-10 20:58:41] 2026-01-10 19:58:02,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,207 | INFO     | time since job start (87749s) is within the limit (349056.0s)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,549 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 20:58:41] 2026-01-10 19:58:03,550 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 20:58:41] 2026-01-10 19:58:03,552 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6963381632/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,553 | INFO     | extracted standard info from prmon json
[2026-01-10 20:58:41] 2026-01-10 19:58:03,553 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:58:41] 2026-01-10 19:58:03,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:58:41] 2026-01-10 19:58:03,597 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:58:41] 2026-01-10 19:58:03,600 | INFO     | sum of square deviations: 918213634840.663
[2026-01-10 20:58:41] 2026-01-10 19:58:03,691 | INFO     | sum of deviations: 1315045391462.5425
[2026-01-10 20:58:41] 2026-01-10 19:58:03,691 | INFO     | mean x: 1768031137.5153203
[2026-01-10 20:58:41] 2026-01-10 19:58:03,691 | INFO     | mean y: 2856004.884401114
[2026-01-10 20:58:41] 2026-01-10 19:58:03,692 | INFO     | intersect: -2529279340.4541173
[2026-01-10 20:58:41] 2026-01-10 19:58:03,693 | INFO     | chi2: 16.868051739136956
[2026-01-10 20:58:41] 2026-01-10 19:58:03,695 | INFO     | sum of square deviations: 908656114270.4905
[2026-01-10 20:58:41] 2026-01-10 19:58:03,768 | INFO     | sum of deviations: 1789998437071.0024
[2026-01-10 20:58:41] 2026-01-10 19:58:03,769 | INFO     | mean x: 1768030985.018868
[2026-01-10 20:58:41] 2026-01-10 19:58:03,769 | INFO     | mean y: 2863582.407407407
[2026-01-10 20:58:41] 2026-01-10 19:58:03,769 | INFO     | intersect: -3480052176.5623093
[2026-01-10 20:58:41] 2026-01-10 19:58:03,771 | INFO     | chi2: 13.650527178271092
[2026-01-10 20:58:41] 2026-01-10 19:58:03,771 | INFO     | current chi2=13.650527178271092 (change=19.074666183295015 %)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,771 | INFO     | right removable region: 1430
[2026-01-10 20:58:41] 2026-01-10 19:58:03,773 | INFO     | sum of square deviations: 908655224890.4906
[2026-01-10 20:58:41] 2026-01-10 19:58:03,853 | INFO     | sum of deviations: 932407738355.5839
[2026-01-10 20:58:41] 2026-01-10 19:58:03,854 | INFO     | mean x: 1768031290.018868
[2026-01-10 20:58:41] 2026-01-10 19:58:03,854 | INFO     | mean y: 2862104.8672257164
[2026-01-10 20:58:41] 2026-01-10 19:58:03,854 | INFO     | intersect: -1811386040.4258091
[2026-01-10 20:58:41] 2026-01-10 19:58:03,856 | INFO     | chi2: 14.779986981469351
[2026-01-10 20:58:41] 2026-01-10 19:58:03,856 | INFO     | current chi2=14.779986981469351 (change=12.37881404420235 %)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,856 | INFO     | left removable region: 10
[2026-01-10 20:58:41] 2026-01-10 19:58:03,858 | INFO     | sum of square deviations: 887861751851.9825
[2026-01-10 20:58:41] 2026-01-10 19:58:03,923 | INFO     | sum of deviations: 1422122009099.001
[2026-01-10 20:58:41] 2026-01-10 19:58:03,923 | INFO     | mean x: 1768031259.5267606
[2026-01-10 20:58:41] 2026-01-10 19:58:03,924 | INFO     | mean y: 2872840.2366197184
[2026-01-10 20:58:41] 2026-01-10 19:58:03,924 | INFO     | intersect: -2829050217.270207
[2026-01-10 20:58:41] 2026-01-10 19:58:03,925 | INFO     | chi2: 10.743878075661343
[2026-01-10 20:58:41] 2026-01-10 19:58:03,926 | INFO     | current memory leak: 1.60 B/s (using 1420 data points, chi2=10.74)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,927 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | ..............................
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . Timing measurements:
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . get job = 0 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . initial setup = 2 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . payload setup = 8 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . stage-in = 0 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . payload execution = 87596 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . stage-out = 5 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,928 | INFO     | . log creation = 2 s
[2026-01-10 20:58:41] 2026-01-10 19:58:03,929 | INFO     | ..............................
[2026-01-10 20:58:41] 2026-01-10 19:58:04,054 | INFO     | 
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | job summary report
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | --------------------------------------------------
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | PanDA job id: 6963381632
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | task id: 47962010
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | errors: (none)
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | pilot state: finished 
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | transexitcode: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | exeerrorcode: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:04,055 | INFO     | exeerrordiag: 
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | exitcode: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | exitmsg: OK
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | cpuconsumptiontime: 360736 s
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | nevents: 900
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | neventsw: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | pid: 9191
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | pgrp: 9191
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | corecount: 8
[2026-01-10 20:58:41] 2026-01-10 19:58:04,056 | INFO     | event service: False
[2026-01-10 20:58:41] 2026-01-10 19:58:04,057 | INFO     | sizes: {0: 2284453, 1: 2284652, 7: 2284914, 12: 2284942, 87609: 2346089, 87616: 2355083, 87617: 2355267, 87732: 2355513}
[2026-01-10 20:58:41] 2026-01-10 19:58:04,057 | INFO     | --------------------------------------------------
[2026-01-10 20:58:41] 2026-01-10 19:58:04,057 | INFO     | 
[2026-01-10 20:58:41] 2026-01-10 19:58:04,057 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-10 20:58:41] 2026-01-10 19:58:04,519 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,519 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,519 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,519 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | job 6963381632 has completed (purged errors)
[2026-01-10 20:58:41] 2026-01-10 19:58:04,521 | INFO     | overall cleanup function is called
[2026-01-10 20:58:41] 2026-01-10 19:58:05,538 | INFO     | --- collectZombieJob: --- 10, [9191]
[2026-01-10 20:58:41] 2026-01-10 19:58:05,539 | INFO     | zombie collector waiting for pid 9191
[2026-01-10 20:58:41] 2026-01-10 19:58:05,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:58:41] 2026-01-10 19:58:05,539 | INFO     | collected zombie processes
[2026-01-10 20:58:41] 2026-01-10 19:58:05,539 | INFO     | will attempt to kill all subprocesses of pid=9191
[2026-01-10 20:58:41] 2026-01-10 19:58:05,634 | INFO     | process IDs to be killed: [9191] (in reverse order)
[2026-01-10 20:58:41] 2026-01-10 19:58:06,454 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:58:41] 2026-01-10 19:58:06,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:58:41] 2026-01-10 19:58:06,457 | INFO     | did not find any defunct processes belonging to 9191
[2026-01-10 20:58:41] 2026-01-10 19:58:06,459 | INFO     | did not find any defunct processes belonging to 9191
[2026-01-10 20:58:41] 2026-01-10 19:58:06,459 | INFO     | ready for new job
[2026-01-10 20:58:41] 2026-01-10 19:58:06,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:58:41] 2026-01-10 19:58:06,464 | INFO     | ***************************************
[2026-01-10 20:58:41] 2026-01-10 19:58:06,465 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:58:41] 2026-01-10 19:58:06,465 | INFO     | ***************************************
[2026-01-10 20:58:41] 2026-01-10 19:58:06,465 | INFO     | 
[2026-01-10 20:58:41] 2026-01-10 19:58:06,466 | INFO     | pilot is running in a VM
[2026-01-10 20:58:41] 2026-01-10 19:58:06,466 | INFO     | architecture information:
[2026-01-10 20:58:41] 2026-01-10 19:58:06,477 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:58:41] 2026-01-10 19:58:06,733 | INFO     | cat /etc/os-release:
[2026-01-10 20:58:41] NAME="CentOS Linux"
[2026-01-10 20:58:41] VERSION="7 (Core)"
[2026-01-10 20:58:41] ID="centos"
[2026-01-10 20:58:41] ID_LIKE="rhel fedora"
[2026-01-10 20:58:41] VERSION_ID="7"
[2026-01-10 20:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:58:41] ANSI_COLOR="0;31"
[2026-01-10 20:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:58:41] HOME_URL="https://www.centos.org/"
[2026-01-10 20:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:58:41] 
[2026-01-10 20:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:58:41] 
[2026-01-10 20:58:41] 2026-01-10 19:58:06,733 | INFO     | ***************************************
[2026-01-10 20:58:41] 2026-01-10 19:58:07,237 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-10 20:58:41] 2026-01-10 19:58:07,510 | INFO     | sufficient remaining disk space (496133734400 B)
[2026-01-10 20:58:41] 2026-01-10 19:58:07,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:58:41] 2026-01-10 19:58:07,511 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:58:41] 2026-01-10 19:58:07,511 | INFO     | update_server=False
[2026-01-10 20:58:41] 2026-01-10 19:58:07,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:58:41] 2026-01-10 19:58:07,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:58:41] 2026-01-10 19:58:07,513 | INFO     | aborting loop
[2026-01-10 20:58:41] 2026-01-10 19:58:07,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:58:41] 2026-01-10 19:58:07,728 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:58:41] 2026-01-10 19:58:07,918 | INFO     | all job control threads have been joined
[2026-01-10 20:58:41] 2026-01-10 19:58:08,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:58:41] 2026-01-10 19:58:08,425 | INFO     | all data control threads have been joined
[2026-01-10 20:58:41] 2026-01-10 19:58:08,516 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:08,518 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:08,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:08,701 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:08,717 | INFO     | all payload control threads have been joined
[2026-01-10 20:58:41] 2026-01-10 19:58:08,924 | INFO     | [job] control thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:58:41] 2026-01-10 19:58:09,118 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,431 | INFO     | [data] control thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,532 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,637 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,723 | INFO     | [payload] control thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,831 | INFO     | [job] validate thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,919 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:09,931 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:10,062 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:10,074 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:11,523 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:58:41] 2026-01-10 19:58:12,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656392312640)>', '<ExcThread(monitor, started 139655282419456)>']
[2026-01-10 20:58:41] 2026-01-10 19:58:17,062 | INFO     | all workflow threads have been joined
[2026-01-10 20:58:41] 2026-01-10 19:58:17,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:58:41] 2026-01-10 19:58:17,063 | INFO     | traces error code: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:17,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:58:41] 2026-01-10 19:58:36,367 | INFO     | PID=2753 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 20:58:41] 2026-01-10 19:58:36,368 | INFO     | .. there are 2 such processes running
[2026-01-10 20:58:41] 2026-01-10 19:58:36,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:58:41] 2026-01-10 19:58:36,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:58:41] 2026-01-10 19:58:36,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:58:41] 2026-01-10 19:58:36,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:58:41] 2026-01-10 19:58:36,372 | INFO     | [monitor] control thread has ended
[2026-01-10 20:58:41] 2026-01-10 19:58:36,717 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:58:41] 2026-01-10 19:58:36,817 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:58:41] 2026-01-10 19:58:36,936 [wrapper] pilotpid: 2753
[2026-01-10 20:58:41] 2026-01-10 19:58:37,045 [wrapper] Pilot exit status: 0
[2026-01-10 20:58:41] 2026-01-10 19:58:37,335 [wrapper] pandaids: 6963381632
[2026-01-10 20:58:41] 2026-01-10 19:58:38,252 [wrapper] cleanup supervisor_pilot 27195 2754
[2026-01-10 20:58:41] 2026-01-10 19:58:38,327 [wrapper] Test setup, not cleaning
[2026-01-10 20:58:41] 2026-01-10 19:58:38,380 [wrapper] apfmon messages muted
[2026-01-10 20:58:41] 2026-01-10 19:58:38,479 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:58:41] 2026-01-10 19:58:38,560 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:58:41]  *** Error codes and diagnostics ***
[2026-01-10 20:58:41]     "exeErrorCode": 0,
[2026-01-10 20:58:41]     "exeErrorDiag": "",
[2026-01-10 20:58:41]     "pilotErrorCode": 0,
[2026-01-10 20:58:41]     "pilotErrorDiag": "",
[2026-01-10 20:58:41]  *** Listing of results directory ***
[2026-01-10 20:58:41] total 1189316
[2026-01-10 20:58:41] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:58:41] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:35 run_atlas
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:35 job.xml
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc 392167151 Jan  9 20:35 EVNT.47962006._000116.pool.root.1
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc    592613 Jan  9 20:35 input.tar.gz
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc      6389 Jan  9 20:35 init_data.xml
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:35 start_atlas.sh
[2026-01-10 20:58:41] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:35 shared
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:35 boinc_lockfile
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc      2893 Jan  9 20:35 pandaJob.out
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc    989364 Jan  9 20:35 agis_schedconf.cvmfs.json
[2026-01-10 20:58:41] drwx------. 5 boinc boinc      4096 Jan  9 20:35 pilot3
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc       533 Jan 10 20:30 boinc_task_state.xml
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc 793582474 Jan 10 20:54 HITS.47962010._001692.pool.root.1
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc      1034 Jan 10 20:55 memory_monitor_summary.json
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc   1516240 Jan 10 20:56 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc   2459602 Jan 10 20:56 log.47962010._001692.job.log.tgz.1
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc      7946 Jan 10 20:58 heartbeat.json
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc      8192 Jan 10 20:58 boinc_mmap_file
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc        29 Jan 10 20:58 wrapper_checkpoint.txt
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc        95 Jan 10 20:58 pilot_heartbeat.json
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc       819 Jan 10 20:58 pilotlog.txt
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc  11648305 Jan 10 20:58 log.47962010._001692.job.log.1
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc       353 Jan 10 20:58 output.list
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc       620 Jan 10 20:58 runtime_log
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc  14131200 Jan 10 20:58 result.tar.gz
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc      8817 Jan 10 20:58 runtime_log.err
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc       662 Jan 10 20:58 gBXLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8cmKDmiz2sJm.diag
[2026-01-10 20:58:41] -rw-r--r--. 1 boinc boinc     21360 Jan 10 20:58 stderr.txt
[2026-01-10 20:58:41] HITS file was successfully produced:
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc 793582474 Jan 10 20:54 shared/HITS.pool.root.1
[2026-01-10 20:58:41]  *** Contents of shared directory: ***
[2026-01-10 20:58:41] total 1172356
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc 392167151 Jan  9 20:35 ATLAS.root_0
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc    592613 Jan  9 20:35 input.tar.gz
[2026-01-10 20:58:41] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:35 start_atlas.sh
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc 793582474 Jan 10 20:54 HITS.pool.root.1
[2026-01-10 20:58:41] -rw-------. 1 boinc boinc  14131200 Jan 10 20:58 result.tar.gz
20:58:42 (31424): run_atlas exited; CPU time 361118.656899
20:58:42 (31424): called boinc_finish(0)

</stderr_txt>
]]>

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