Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:54:58 (1899569): wrapper (7.7.26015): starting
13:54:58 (1899569): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:54:58] Arguments: --nthreads 8
[2026-01-09 13:54:58] Threads: 8
[2026-01-09 13:54:58] Checking for CVMFS
[2026-01-09 13:54:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:54:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:54:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:54:59] 2.13.3.0 7268 23270 207292 154953 1 136 27517788 40960000 26649 16776704 0 56589672 99.655 53489548 39032 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:54:59] CVMFS is ok
[2026-01-09 13:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:54:59] Further information can be found at the LHC@home message board.
[2026-01-09 13:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:54:59] Checking for apptainer binary...
[2026-01-09 13:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:54:59] Running /usr/bin/apptainer --version
[2026-01-09 13:54:59] apptainer version 1.4.5-2.el9
[2026-01-09 13:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:54:59] c-212-18.aglt2.org
[2026-01-09 13:54:59] apptainer works
[2026-01-09 13:54:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:54:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:54:59] Starting ATLAS job with PandaID=6963381635
[2026-01-09 13:54:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:40:04 (1899569): BOINC client no longer exists - exiting
23:40:04 (1899569): timer handler: client dead, exiting
23:46:48 (204995): wrapper (7.7.26015): starting
23:46:48 (204995): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:46:48] Arguments: --nthreads 8
[2026-01-09 23:46:48] Threads: 8
[2026-01-09 23:46:48] This job has been restarted, cleaning up previous attempt
[2026-01-09 23:46:48] Checking for CVMFS
[2026-01-09 23:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:46:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:46:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:46:48] 2.13.3.0 7268 23861 214664 154968 3 386 33159053 40960000 21706 16776704 0 57987114 99.659 54069840 38992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 23:46:48] CVMFS is ok
[2026-01-09 23:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 23:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 23:46:48] Further information can be found at the LHC@home message board.
[2026-01-09 23:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:46:48] Checking for apptainer binary...
[2026-01-09 23:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:46:48] Running /usr/bin/apptainer --version
[2026-01-09 23:46:48] apptainer version 1.4.5-2.el9
[2026-01-09 23:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:46:49] c-212-18.aglt2.org
[2026-01-09 23:46:49] apptainer works
[2026-01-09 23:46:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:46:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:46:49] Starting ATLAS job with PandaID=6963381635
[2026-01-09 23:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:08:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:08:04] 2026-01-11 00:06:59,664 | INFO     | time since job start (69599s) is within the limit (349056.0s)
[2026-01-10 19:08:04] 2026-01-11 00:07:01,673 | INFO     | time since job start (69601s) is within the limit (349056.0s)
[2026-01-10 19:08:04] 2026-01-11 00:07:01,846 | INFO     | monitor loop #4854: job 0:6963381635 is in state 'finished'
[2026-01-10 19:08:04] 2026-01-11 00:07:01,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,057 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:08:04] 2026-01-11 00:07:03,068 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3325.135156250001
[2026-01-10 19:08:04] 2026-01-11 00:07:03,081 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963381635/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,082 | INFO     | extracted standard info from prmon json
[2026-01-10 19:08:04] 2026-01-11 00:07:03,082 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:08:04] 2026-01-11 00:07:03,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:08:04] 2026-01-11 00:07:03,096 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:08:04] 2026-01-11 00:07:03,097 | INFO     | sum of square deviations: 460612612082.95074
[2026-01-10 19:08:04] 2026-01-11 00:07:03,121 | INFO     | sum of deviations: 5369338442804.717
[2026-01-10 19:08:04] 2026-01-11 00:07:03,121 | INFO     | mean x: 1768055217.483786
[2026-01-10 19:08:04] 2026-01-11 00:07:03,122 | INFO     | mean y: 3001946.3628396145
[2026-01-10 19:08:04] 2026-01-11 00:07:03,122 | INFO     | intersect: -20607130297.53569
[2026-01-10 19:08:04] 2026-01-11 00:07:03,123 | INFO     | chi2: 10.648316331700302
[2026-01-10 19:08:04] 2026-01-11 00:07:03,124 | INFO     | sum of square deviations: 454583904611.77466
[2026-01-10 19:08:04] 2026-01-11 00:07:03,145 | INFO     | sum of deviations: 5802781768052.945
[2026-01-10 19:08:04] 2026-01-11 00:07:03,145 | INFO     | mean x: 1768055064.9859154
[2026-01-10 19:08:04] 2026-01-11 00:07:03,145 | INFO     | mean y: 3012909.3714788733
[2026-01-10 19:08:04] 2026-01-11 00:07:03,145 | INFO     | intersect: -22566280882.00441
[2026-01-10 19:08:04] 2026-01-11 00:07:03,146 | INFO     | chi2: 6.834331790553495
[2026-01-10 19:08:04] 2026-01-11 00:07:03,146 | INFO     | current chi2=6.834331790553495 (change=35.81772387614444 %)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,147 | INFO     | sum of square deviations: 448607966044.5644
[2026-01-10 19:08:04] 2026-01-11 00:07:03,168 | INFO     | sum of deviations: 6105535498955.93
[2026-01-10 19:08:04] 2026-01-11 00:07:03,168 | INFO     | mean x: 1768054912.4871795
[2026-01-10 19:08:04] 2026-01-11 00:07:03,168 | INFO     | mean y: 3020627.270557029
[2026-01-10 19:08:04] 2026-01-11 00:07:03,168 | INFO     | intersect: -24060132168.419064
[2026-01-10 19:08:04] 2026-01-11 00:07:03,169 | INFO     | chi2: 4.475476727802146
[2026-01-10 19:08:04] 2026-01-11 00:07:03,169 | INFO     | current chi2=4.475476727802146 (change=34.514787034656266 %)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,170 | INFO     | sum of square deviations: 442684564367.8263
[2026-01-10 19:08:04] 2026-01-11 00:07:03,191 | INFO     | sum of deviations: 6191904322583.565
[2026-01-10 19:08:04] 2026-01-11 00:07:03,191 | INFO     | mean x: 1768054759.9875667
[2026-01-10 19:08:04] 2026-01-11 00:07:03,191 | INFO     | mean y: 3022848.397868561
[2026-01-10 19:08:04] 2026-01-11 00:07:03,191 | INFO     | intersect: -24727059906.046417
[2026-01-10 19:08:04] 2026-01-11 00:07:03,192 | INFO     | chi2: 4.049844443799986
[2026-01-10 19:08:04] 2026-01-11 00:07:03,192 | INFO     | current chi2=4.049844443799986 (change=9.510322807804718 %)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,192 | INFO     | right removable region: 1125
[2026-01-10 19:08:04] 2026-01-11 00:07:03,193 | INFO     | sum of square deviations: 454583567891.7747
[2026-01-10 19:08:04] 2026-01-11 00:07:03,214 | INFO     | sum of deviations: 4978478774231.12
[2026-01-10 19:08:04] 2026-01-11 00:07:03,214 | INFO     | mean x: 1768055369.9859154
[2026-01-10 19:08:04] 2026-01-11 00:07:03,215 | INFO     | mean y: 3011827.6320422534
[2026-01-10 19:08:04] 2026-01-11 00:07:03,215 | INFO     | intersect: -19360262062.716377
[2026-01-10 19:08:04] 2026-01-11 00:07:03,216 | INFO     | chi2: 8.000087563604838
[2026-01-10 19:08:04] 2026-01-11 00:07:03,216 | INFO     | current chi2=8.000087563604838 (change=24.86992953253672 %)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,216 | INFO     | left removable region: 10
[2026-01-10 19:08:04] 2026-01-11 00:07:03,217 | INFO     | sum of square deviations: 429836738356.68555
[2026-01-10 19:08:04] 2026-01-11 00:07:03,239 | INFO     | sum of deviations: 5648123863978.64
[2026-01-10 19:08:04] 2026-01-11 00:07:03,239 | INFO     | mean x: 1768055034.4923766
[2026-01-10 19:08:04] 2026-01-11 00:07:03,239 | INFO     | mean y: 3037206.133632287
[2026-01-10 19:08:04] 2026-01-11 00:07:03,239 | INFO     | intersect: -23229490267.72148
[2026-01-10 19:08:04] 2026-01-11 00:07:03,240 | INFO     | chi2: 1.072610781133502
[2026-01-10 19:08:04] 2026-01-11 00:07:03,240 | INFO     | current memory leak: 13.14 B/s (using 1115 data points, chi2=1.07)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,241 | INFO     | could have reported an average CPU frequency of 3323 MHz (42 samples)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | ..............................
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . Timing measurements:
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . get job = 0 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . initial setup = 2 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . payload setup = 6 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . stage-in = 0 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . payload execution = 69561 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . stage-out = 3 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | . log creation = 0 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,242 | INFO     | ..............................
[2026-01-10 19:08:04] 2026-01-11 00:07:03,310 | INFO     | 
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | job summary report
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | --------------------------------------------------
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | PanDA job id: 6963381635
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | task id: 47962010
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | errors: (none)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | pilot state: finished 
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | transexitcode: 0
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | exeerrorcode: 0
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | exeerrordiag: 
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | exitcode: 0
[2026-01-10 19:08:04] 2026-01-11 00:07:03,311 | INFO     | exitmsg: OK
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | cpuconsumptiontime: 195820 s
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | nevents: 900
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | neventsw: 0
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | pid: 261645
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | pgrp: 261645
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | corecount: 8
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | event service: False
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | sizes: {0: 2283796, 1: 2284652, 5: 2284914, 12: 2284970, 69571: 2341593, 69575: 2350587, 69578: 2350771, 69589: 2351017}
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | --------------------------------------------------
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | 
[2026-01-10 19:08:04] 2026-01-11 00:07:03,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 19:08:04] 2026-01-11 00:07:03,336 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:08:04] 2026-01-11 00:07:03,338 | INFO     | job 6963381635 has completed (purged errors)
[2026-01-10 19:08:04] 2026-01-11 00:07:03,338 | INFO     | overall cleanup function is called
[2026-01-10 19:08:04] 2026-01-11 00:07:04,353 | INFO     | --- collectZombieJob: --- 10, [261645]
[2026-01-10 19:08:04] 2026-01-11 00:07:04,353 | INFO     | zombie collector waiting for pid 261645
[2026-01-10 19:08:04] 2026-01-11 00:07:04,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:08:04] 2026-01-11 00:07:04,353 | INFO     | collected zombie processes
[2026-01-10 19:08:04] 2026-01-11 00:07:04,353 | INFO     | will attempt to kill all subprocesses of pid=261645
[2026-01-10 19:08:04] 2026-01-11 00:07:04,746 | INFO     | process IDs to be killed: [261645] (in reverse order)
[2026-01-10 19:08:04] 2026-01-11 00:07:04,904 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:08:04] 2026-01-11 00:07:04,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:08:04] 2026-01-11 00:07:04,923 | INFO     | did not find any defunct processes belonging to 261645
[2026-01-10 19:08:04] 2026-01-11 00:07:04,940 | INFO     | did not find any defunct processes belonging to 261645
[2026-01-10 19:08:04] 2026-01-11 00:07:04,940 | INFO     | ready for new job
[2026-01-10 19:08:04] 2026-01-11 00:07:04,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:08:04] 2026-01-11 00:07:04,944 | INFO     | ***************************************
[2026-01-10 19:08:04] 2026-01-11 00:07:04,947 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:08:04] 2026-01-11 00:07:04,947 | INFO     | ***************************************
[2026-01-10 19:08:04] 2026-01-11 00:07:04,947 | INFO     | 
[2026-01-10 19:08:04] 2026-01-11 00:07:04,952 | INFO     | architecture information:
[2026-01-10 19:08:04] 2026-01-11 00:07:04,953 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:08:04] 2026-01-11 00:07:04,968 | INFO     | cat /etc/os-release:
[2026-01-10 19:08:04] NAME="CentOS Linux"
[2026-01-10 19:08:04] VERSION="7 (Core)"
[2026-01-10 19:08:04] ID="centos"
[2026-01-10 19:08:04] ID_LIKE="rhel fedora"
[2026-01-10 19:08:04] VERSION_ID="7"
[2026-01-10 19:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:08:04] ANSI_COLOR="0;31"
[2026-01-10 19:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:08:04] HOME_URL="https://www.centos.org/"
[2026-01-10 19:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:08:04] 
[2026-01-10 19:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:08:04] 
[2026-01-10 19:08:04] 2026-01-11 00:07:04,969 | INFO     | ***************************************
[2026-01-10 19:08:04] 2026-01-11 00:07:05,471 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 19:08:04] 2026-01-11 00:07:05,495 | INFO     | sufficient remaining disk space (127200657408 B)
[2026-01-10 19:08:04] 2026-01-11 00:07:05,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:08:04] 2026-01-11 00:07:05,496 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:08:04] 2026-01-11 00:07:05,496 | INFO     | update_server=False
[2026-01-10 19:08:04] 2026-01-11 00:07:05,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:08:04] 2026-01-11 00:07:05,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:08:04] 2026-01-11 00:07:05,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:08:04] 2026-01-11 00:07:05,497 | INFO     | aborting loop
[2026-01-10 19:08:04] 2026-01-11 00:07:06,042 | INFO     | all data control threads have been joined
[2026-01-10 19:08:04] 2026-01-11 00:07:06,502 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:06,505 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:06,687 | INFO     | all job control threads have been joined
[2026-01-10 19:08:04] 2026-01-11 00:07:06,798 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:06,836 | INFO     | all payload control threads have been joined
[2026-01-10 19:08:04] 2026-01-11 00:07:06,839 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,048 | INFO     | [data] control thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,124 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,352 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,503 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,544 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,641 | INFO     | [job] validate thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,692 | INFO     | [job] control thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:08:04] 2026-01-11 00:07:07,841 | INFO     | [payload] control thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,845 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:07,932 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:08,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:08:04] 2026-01-11 00:07:09,327 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:11,760 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:08:04] 2026-01-11 00:07:35,290 | INFO     | PID=224022 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 19:08:04] 2026-01-11 00:07:35,290 | INFO     | .. there are 20 such processes running
[2026-01-10 19:08:04] 2026-01-11 00:07:35,291 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:08:04] 2026-01-11 00:07:35,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:08:04] 2026-01-11 00:07:35,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:08:04] 2026-01-11 00:07:56,565 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:08:04] 2026-01-11 00:07:58,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208205764416)>', '<ExcThread(monitor, started 140207840020224)>']
[2026-01-10 19:08:04] 2026-01-11 00:07:58,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:08:04] 2026-01-11 00:07:58,432 | INFO     | [monitor] control thread has ended
[2026-01-10 19:08:04] 2026-01-11 00:08:03,370 | INFO     | all workflow threads have been joined
[2026-01-10 19:08:04] 2026-01-11 00:08:03,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:08:04] 2026-01-11 00:08:03,370 | INFO     | traces error code: 0
[2026-01-10 19:08:04] 2026-01-11 00:08:03,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:08:04] 2026-01-11 00:08:03,528 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:08:04] 2026-01-11 00:08:03,540 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:08:04] 2026-01-11 00:08:03,546 [wrapper] pilotpid: 224022
[2026-01-10 19:08:04] 2026-01-11 00:08:03,562 [wrapper] Pilot exit status: 0
[2026-01-10 19:08:04] 2026-01-11 00:08:03,660 [wrapper] pandaids: 6963381635 6963381635
[2026-01-10 19:08:04] 2026-01-11 00:08:03,819 [wrapper] cleanup supervisor_pilot 2648101 224023
[2026-01-10 19:08:04] 2026-01-11 00:08:03,824 [wrapper] Test setup, not cleaning
[2026-01-10 19:08:04] 2026-01-11 00:08:03,826 [wrapper] apfmon messages muted
[2026-01-10 19:08:04] 2026-01-11 00:08:03,837 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:08:04] 2026-01-11 00:08:03,845 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:08:04]  *** Error codes and diagnostics ***
[2026-01-10 19:08:04]     "exeErrorCode": 0,
[2026-01-10 19:08:04]     "exeErrorDiag": "",
[2026-01-10 19:08:04]     "pilotErrorCode": 0,
[2026-01-10 19:08:04]     "pilotErrorDiag": "",
[2026-01-10 19:08:04]  *** Listing of results directory ***
[2026-01-10 19:08:04] total 1562780
[2026-01-10 19:08:04] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 19:08:04] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:08:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:54 run_atlas
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:54 job.xml
[2026-01-10 19:08:04] -rw-r--r--. 3 boincer umatlas 392167151 Jan  9 13:54 EVNT.47962006._000116.pool.root.1
[2026-01-10 19:08:04] -rw-r--r--. 3 boincer umatlas 392167151 Jan  9 13:54 ATLAS.root_0
[2026-01-10 19:08:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:54 start_atlas.sh
[2026-01-10 19:08:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:54 shared
[2026-01-10 19:08:04] -rw-r--r--. 2 boincer umatlas    592618 Jan  9 13:54 input.tar.gz
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:54 boinc_lockfile
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas      2893 Jan  9 23:46 pandaJob.out
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas        57 Jan  9 23:46 setup.sh.local
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas    989374 Jan  9 23:46 agis_schedconf.cvmfs.json
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas       533 Jan 10 18:46 boinc_task_state.xml
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas      6958 Jan 10 19:00 init_data.xml
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas 788452095 Jan 10 19:06 HITS.47962010._001695.pool.root.1
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas      1073 Jan 10 19:06 memory_monitor_summary.json
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas   2279563 Jan 10 19:06 log.47962010._001695.job.log.tgz.1
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas      8639 Jan 10 19:07 heartbeat.json
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas        96 Jan 10 19:07 pilot_heartbeat.json
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:08 boinc_mmap_file
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas        29 Jan 10 19:08 wrapper_checkpoint.txt
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas      4824 Jan 10 19:08 pilotlog.txt
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas   9504572 Jan 10 19:08 log.47962010._001695.job.log.1
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas       353 Jan 10 19:08 output.list
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:08 runtime_log
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas  11806720 Jan 10 19:08 result.tar.gz
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas       792 Jan 10 19:08 sHYLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9cmKDm6Oochm.diag
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas      9428 Jan 10 19:08 runtime_log.err
[2026-01-10 19:08:04] -rw-r--r--. 1 boincer umatlas     23499 Jan 10 19:08 stderr.txt
[2026-01-10 19:08:04] HITS file was successfully produced:
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas 788452095 Jan 10 19:06 shared/HITS.pool.root.1
[2026-01-10 19:08:04]  *** Contents of shared directory: ***
[2026-01-10 19:08:04] total 1165088
[2026-01-10 19:08:04] -rw-r--r--. 3 boincer umatlas 392167151 Jan  9 13:54 ATLAS.root_0
[2026-01-10 19:08:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:54 start_atlas.sh
[2026-01-10 19:08:04] -rw-r--r--. 2 boincer umatlas    592618 Jan  9 13:54 input.tar.gz
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas 788452095 Jan 10 19:06 HITS.pool.root.1
[2026-01-10 19:08:04] -rw-------. 1 boincer umatlas  11806720 Jan 10 19:08 result.tar.gz
19:08:05 (204995): run_atlas exited; CPU time 196417.570618
19:08:05 (204995): called boinc_finish(0)

</stderr_txt>
]]>

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