Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:03:03 (1485622): wrapper (7.7.26015): starting
09:03:03 (1485622): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 09:03:03] Arguments: --nthreads 12
[2026-01-09 09:03:03] Threads: 12
[2026-01-09 09:03:03] Checking for CVMFS
[2026-01-09 09:03:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:03:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:03:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:03:04] 2.11.5.0 4038285 91925 220952 154950 2 661 41685880 45568001 15708 130560 0 755029440 99.796 453315131 18134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 09:03:04] CVMFS is ok
[2026-01-09 09:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:03:04] Further information can be found at the LHC@home message board.
[2026-01-09 09:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:03:04] Checking for apptainer binary...
[2026-01-09 09:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:03:04] Running /usr/bin/apptainer --version
[2026-01-09 09:03:04] apptainer version 1.4.1-1.el9
[2026-01-09 09:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:03:04] wns0061.triumf.lcg
[2026-01-09 09:03:04] apptainer works
[2026-01-09 09:03:04] Set ATHENA_PROC_NUMBER=12
[2026-01-09 09:03:04] Set ATHENA_CORE_NUMBER=12
[2026-01-09 09:03:04] Starting ATLAS job with PandaID=6963381503
[2026-01-09 09:03:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:09:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | wrong length of table data, x=[1767978274.0, 1767978335.0, 1767978396.0], y=[2079.0, 784093.0, 255484.0] (must be same and length>=4)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | could have reported an average CPU frequency of 2713 MHz (4 samples)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . Timing measurements:
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . get job = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . initial setup = 5 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload setup = 21 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-in = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload execution = 137 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-out = 1 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . log creation = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:09:39] 2026-01-09 17:08:59,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381503/pilotlog.txt
[2026-01-09 09:09:39] 2026-01-09 17:08:59,745 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 09:09:39] - Log from pilotlog.txt -
[2026-01-09 09:09:39] 2026-01-09 17:08:59,729 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381503/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | INFO     | extracted standard info from prmon json
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | wrong length of table data, x=[1767978274.0, 1767978335.0, 1767978396.0], y=[2079.0, 784093.0, 255484.0] (must be same and length>=4)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | could have reported an average CPU frequency of 2713 MHz (4 samples)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . Timing measurements:
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . get job = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . initial setup = 5 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload setup = 21 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-in = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload execution = 137 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-out = 1 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . log creation = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:09:39] 2026-01-09 17:08:59,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381503/pilotlog.txt
[2026-01-09 09:09:39] 2026-01-09 17:08:59,745 | WARNING  | 
[2026-01-09 09:09:39] [begin log extracts]
[2026-01-09 09:09:39] - Log from pilotlog.txt -
[2026-01-09 09:09:39] 2026-01-09 17:08:59,729 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381503/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | INFO     | extracted standard info from prmon json
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:09:39] 2026-01-09 17:08:59,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:09:39] 2026-01-09 17:08:59,731 | WARNING  | wrong length of table data, x=[1767978274.0, 1767978335.0, 1767978396.0], y=[2079.0, 784093.0, 255484.0] (must be same and length>=4)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | could have reported an average CPU frequency of 2713 MHz (4 samples)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . Timing measurements:
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . get job = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . initial setup = 5 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload setup = 21 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-in = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . payload execution = 137 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . stage-out = 1 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | . log creation = 0 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | ..............................
[2026-01-09 09:09:39] 2026-01-09 17:08:59,732 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:09:39] 2026-01-09 17:08:59,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381503/pilotlog.txt
[2026-01-09 09:09:39] [end log extracts]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,745 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,746 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 09:09:39] 2026-01-09 17:08:59,839 | INFO     | 
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | job summary report
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | --------------------------------------------------
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | PanDA job id: 6963381503
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | task id: 47962010
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 09:06:31,805 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | pilot state: failed 
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | transexitcode: 65
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | exeerrorcode: 65
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | exitcode: 65
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | cpuconsumptiontime: 43 s
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | nevents: 0
[2026-01-09 09:09:39] 2026-01-09 17:08:59,840 | INFO     | neventsw: 0
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | pid: 1496175
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | pgrp: 1496175
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | corecount: 12
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | event service: False
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | sizes: {0: 2284619, 9: 2284881, 11: 2284909, 162: 2310369, 163: 2310345, 165: 2314663, 168: 2314819, 302: 2314985}
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | --------------------------------------------------
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | 
[2026-01-09 09:09:39] 2026-01-09 17:08:59,841 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 09:09:39] 2026-01-09 17:08:59,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,857 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:09:39] 2026-01-09 17:08:59,859 | INFO     | job 6963381503 has completed (purged errors)
[2026-01-09 09:09:39] 2026-01-09 17:08:59,859 | INFO     | overall cleanup function is called
[2026-01-09 09:09:39] 2026-01-09 17:09:00,866 | INFO     | --- collectZombieJob: --- 10, [1496175]
[2026-01-09 09:09:39] 2026-01-09 17:09:00,867 | INFO     | zombie collector waiting for pid 1496175
[2026-01-09 09:09:39] 2026-01-09 17:09:00,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:09:39] 2026-01-09 17:09:00,870 | INFO     | collected zombie processes
[2026-01-09 09:09:39] 2026-01-09 17:09:00,870 | INFO     | will attempt to kill all subprocesses of pid=1496175
[2026-01-09 09:09:39] 2026-01-09 17:09:01,272 | INFO     | process IDs to be killed: [1496175] (in reverse order)
[2026-01-09 09:09:39] 2026-01-09 17:09:01,344 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:09:39] 2026-01-09 17:09:01,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:09:39] 2026-01-09 17:09:01,419 | INFO     | did not find any defunct processes belonging to 1496175
[2026-01-09 09:09:39] 2026-01-09 17:09:01,427 | INFO     | did not find any defunct processes belonging to 1496175
[2026-01-09 09:09:39] 2026-01-09 17:09:01,428 | INFO     | ready for new job
[2026-01-09 09:09:39] 2026-01-09 17:09:01,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:09:39] 2026-01-09 17:09:01,430 | INFO     | ***************************************
[2026-01-09 09:09:39] 2026-01-09 17:09:01,430 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:09:39] 2026-01-09 17:09:01,430 | INFO     | ***************************************
[2026-01-09 09:09:39] 2026-01-09 17:09:01,430 | INFO     | 
[2026-01-09 09:09:39] 2026-01-09 17:09:01,432 | INFO     | architecture information:
[2026-01-09 09:09:39] 2026-01-09 17:09:01,433 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:09:39] 2026-01-09 17:09:01,445 | INFO     | cat /etc/os-release:
[2026-01-09 09:09:39] NAME="CentOS Linux"
[2026-01-09 09:09:39] VERSION="7 (Core)"
[2026-01-09 09:09:39] ID="centos"
[2026-01-09 09:09:39] ID_LIKE="rhel fedora"
[2026-01-09 09:09:39] VERSION_ID="7"
[2026-01-09 09:09:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:09:39] ANSI_COLOR="0;31"
[2026-01-09 09:09:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:09:39] HOME_URL="https://www.centos.org/"
[2026-01-09 09:09:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:09:39] 
[2026-01-09 09:09:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:09:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:09:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:09:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:09:39] 
[2026-01-09 09:09:39] 2026-01-09 17:09:01,446 | INFO     | ***************************************
[2026-01-09 09:09:39] 2026-01-09 17:09:01,959 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 09:09:39] 2026-01-09 17:09:02,010 | INFO     | sufficient remaining disk space (1973587804160 B)
[2026-01-09 09:09:39] 2026-01-09 17:09:02,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:09:39] 2026-01-09 17:09:02,010 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:09:39] 2026-01-09 17:09:02,010 | INFO     | update_server=False
[2026-01-09 09:09:39] 2026-01-09 17:09:02,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:09:39] 2026-01-09 17:09:02,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:09:39] 2026-01-09 17:09:02,300 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:09:39] 2026-01-09 17:09:02,301 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:09:39] 2026-01-09 17:09:02,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:09:39] 2026-01-09 17:09:02,301 | INFO     | will abort loop
[2026-01-09 09:09:39] 2026-01-09 17:09:02,467 | INFO     | all data control threads have been joined
[2026-01-09 09:09:39] 2026-01-09 17:09:02,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:09:39] 2026-01-09 17:09:02,773 | INFO     | all payload control threads have been joined
[2026-01-09 09:09:39] 2026-01-09 17:09:03,017 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,307 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,441 | INFO     | all job control threads have been joined
[2026-01-09 09:09:39] 2026-01-09 17:09:03,474 | INFO     | [data] control thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,609 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,779 | INFO     | [payload] control thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:03,991 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,019 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,146 | INFO     | [job] validate thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,147 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,430 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,442 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,448 | INFO     | [job] control thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,623 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:04,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:09:39] 2026-01-09 17:09:05,829 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:06,678 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:09:39] 2026-01-09 17:09:32,384 | INFO     | PID=1489506 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:09:39] 2026-01-09 17:09:32,385 | INFO     | .. there are 28 such processes running
[2026-01-09 09:09:39] 2026-01-09 17:09:32,385 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:09:39] 2026-01-09 17:09:32,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:09:39] 2026-01-09 17:09:32,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:09:39] 2026-01-09 17:09:33,692 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:09:39] 2026-01-09 17:09:34,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704054462272)>', '<ExcThread(monitor, started 139703516907264)>']
[2026-01-09 09:09:39] 2026-01-09 17:09:35,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:09:39] 2026-01-09 17:09:35,406 | INFO     | [monitor] control thread has ended
[2026-01-09 09:09:39] 2026-01-09 17:09:39,519 | INFO     | all workflow threads have been joined
[2026-01-09 09:09:39] 2026-01-09 17:09:39,520 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:09:39] 2026-01-09 17:09:39,520 | INFO     | traces error code: 0
[2026-01-09 09:09:39] 2026-01-09 17:09:39,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:09:39] 2026-01-09 17:09:39,697 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:09:39] 2026-01-09 17:09:39,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:09:39] 2026-01-09 17:09:39,701 [wrapper] pilotpid: 1489506
[2026-01-09 09:09:39] 2026-01-09 17:09:39,702 [wrapper] Pilot exit status: 0
[2026-01-09 09:09:39] 2026-01-09 17:09:39,717 [wrapper] pandaids: 6963381503
[2026-01-09 09:09:39] 2026-01-09 17:09:39,759 [wrapper] cleanup supervisor_pilot 1489512 1489507
[2026-01-09 09:09:39] 2026-01-09 17:09:39,761 [wrapper] Test setup, not cleaning
[2026-01-09 09:09:39] 2026-01-09 17:09:39,764 [wrapper] apfmon messages muted
[2026-01-09 09:09:39] 2026-01-09 17:09:39,765 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:09:39] 2026-01-09 17:09:39,781 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:09:39]  *** Error codes and diagnostics ***
[2026-01-09 09:09:39]     "exeErrorCode": 65,
[2026-01-09 09:09:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 09:09:39]     "pilotErrorCode": 1305,
[2026-01-09 09:09:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 09:09:39]  *** Listing of results directory ***
[2026-01-09 09:09:39] total 387068
[2026-01-09 09:09:39] -rwx------. 1 boinc boinc     36322 Jan  8 23:17 runpilot2-wrapper.sh
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:09:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:03 run_atlas
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:03 job.xml
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc      6595 Jan  9 09:03 init_data.xml
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc 392134654 Jan  9 09:03 EVNT.47962006._000034.pool.root.1
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:03 start_atlas.sh
[2026-01-09 09:09:39] drwxrwx--x. 2 boinc boinc      4096 Jan  9 09:03 shared
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc    592619 Jan  9 09:03 input.tar.gz
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:03 boinc_lockfile
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc      2892 Jan  9 09:03 pandaJob.out
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc    989356 Jan  9 09:03 agis_schedconf.cvmfs.json
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc   1516240 Jan  9 09:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:09:39] drwx------. 5 boinc boinc      4096 Jan  9 09:03 pilot3
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc       524 Jan  9 09:06 boinc_task_state.xml
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc       994 Jan  9 09:06 memory_monitor_summary.json
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc     49990 Jan  9 09:06 log.47962010._001619.job.log.tgz.1
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc        95 Jan  9 09:08 pilot_heartbeat.json
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc     10338 Jan  9 09:08 heartbeat.json
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc        23 Jan  9 09:09 wrapper_checkpoint.txt
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:09 boinc_mmap_file
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc      5009 Jan  9 09:09 pilotlog.txt
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc    105360 Jan  9 09:09 log.47962010._001619.job.log.1
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc       186 Jan  9 09:09 output.list
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:09 runtime_log
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc    174080 Jan  9 09:09 result.tar.gz
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc       645 Jan  9 09:09 t8uKDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmccmKDm1WhzTn.diag
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc      8636 Jan  9 09:09 runtime_log.err
[2026-01-09 09:09:39] -rw-r--r--. 1 boinc boinc     21752 Jan  9 09:09 stderr.txt
[2026-01-09 09:09:39] No HITS result produced
[2026-01-09 09:09:39]  *** Contents of shared directory: ***
[2026-01-09 09:09:39] total 383716
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc 392134654 Jan  9 09:03 ATLAS.root_0
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:03 start_atlas.sh
[2026-01-09 09:09:39] -rw-r--r--. 2 boinc boinc    592619 Jan  9 09:03 input.tar.gz
[2026-01-09 09:09:39] -rw-------. 1 boinc boinc    174080 Jan  9 09:09 result.tar.gz
09:09:41 (1485622): run_atlas exited; CPU time 46.752660
09:09:41 (1485622): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN