Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:35 (1092040): wrapper (7.7.26015): starting
09:12:35 (1092040): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 09:12:36] Arguments: --nthreads 12
[2026-01-09 09:12:36] Threads: 12
[2026-01-09 09:12:36] Checking for CVMFS
[2026-01-09 09:12:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:12:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:12:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:12:36] 2.11.5.0 2104101 92009 175984 154950 1 690 39381896 45568001 12333 130560 0 803372335 99.787 521251460 23514 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 09:12:36] CVMFS is ok
[2026-01-09 09:12:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:12:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:12:36] Further information can be found at the LHC@home message board.
[2026-01-09 09:12:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:12:36] Checking for apptainer binary...
[2026-01-09 09:12:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:12:36] Running /usr/bin/apptainer --version
[2026-01-09 09:12:37] apptainer version 1.4.1-1.el9
[2026-01-09 09:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:12:37] wns0090.triumf.lcg
[2026-01-09 09:12:37] apptainer works
[2026-01-09 09:12:37] Set ATHENA_PROC_NUMBER=12
[2026-01-09 09:12:37] Set ATHENA_CORE_NUMBER=12
[2026-01-09 09:12:37] Starting ATLAS job with PandaID=6963381833
[2026-01-09 09:12:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:17:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:17:59] 2026-01-09 17:17:08,427 | WARNING  | wrong length of table data, x=[1767978811.0, 1767978872.0], y=[1822.0, 812424.0] (must be same and length>=4)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . Timing measurements:
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . get job = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . initial setup = 3 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload setup = 9 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-in = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload execution = 100 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-out = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . log creation = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381833/pilotlog.txt
[2026-01-09 09:17:59] 2026-01-09 17:17:08,505 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 09:17:59] - Log from pilotlog.txt -
[2026-01-09 09:17:59] 2026-01-09 17:17:08,377 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381833/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,425 | INFO     | extracted standard info from prmon json
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:17:59] 2026-01-09 17:17:08,427 | WARNING  | wrong length of table data, x=[1767978811.0, 1767978872.0], y=[1822.0, 812424.0] (must be same and length>=4)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . Timing measurements:
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . get job = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . initial setup = 3 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload setup = 9 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-in = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload execution = 100 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-out = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . log creation = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381833/pilotlog.txt
[2026-01-09 09:17:59] 2026-01-09 17:17:08,506 | WARNING  | 
[2026-01-09 09:17:59] [begin log extracts]
[2026-01-09 09:17:59] - Log from pilotlog.txt -
[2026-01-09 09:17:59] 2026-01-09 17:17:08,377 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381833/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,425 | INFO     | extracted standard info from prmon json
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:17:59] 2026-01-09 17:17:08,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:17:59] 2026-01-09 17:17:08,427 | WARNING  | wrong length of table data, x=[1767978811.0, 1767978872.0], y=[1822.0, 812424.0] (must be same and length>=4)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . Timing measurements:
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . get job = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . initial setup = 3 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload setup = 9 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-in = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . payload execution = 100 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . stage-out = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | . log creation = 0 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,428 | INFO     | ..............................
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 09:17:59] 2026-01-09 17:17:08,429 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381833/pilotlog.txt
[2026-01-09 09:17:59] [end log extracts]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,506 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,507 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 09:17:59] 2026-01-09 17:17:08,714 | INFO     | 
[2026-01-09 09:17:59] 2026-01-09 17:17:08,714 | INFO     | job summary report
[2026-01-09 09:17:59] 2026-01-09 17:17:08,714 | INFO     | --------------------------------------------------
[2026-01-09 09:17:59] 2026-01-09 17:17:08,714 | INFO     | PanDA job id: 6963381833
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | task id: 47962010
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 09:14:57,470 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | pilot state: failed 
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | transexitcode: 65
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | exeerrorcode: 65
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | exitcode: 65
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | cpuconsumptiontime: 41 s
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | nevents: 0
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | neventsw: 0
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | pid: 1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | pgrp: 1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | corecount: 12
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | event service: False
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | sizes: {0: 2284621, 1: 2284621, 11: 2284939, 113: 2310320, 114: 2314638, 237: 2314776}
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | --------------------------------------------------
[2026-01-09 09:17:59] 2026-01-09 17:17:08,715 | INFO     | 
[2026-01-09 09:17:59] 2026-01-09 17:17:08,716 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 09:17:59] 2026-01-09 17:17:08,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,761 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,761 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,761 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:17:59] 2026-01-09 17:17:08,762 | INFO     | job 6963381833 has completed (purged errors)
[2026-01-09 09:17:59] 2026-01-09 17:17:08,763 | INFO     | overall cleanup function is called
[2026-01-09 09:17:59] 2026-01-09 17:17:09,782 | INFO     | --- collectZombieJob: --- 10, [1102601]
[2026-01-09 09:17:59] 2026-01-09 17:17:09,782 | INFO     | zombie collector waiting for pid 1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:09,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:17:59] 2026-01-09 17:17:09,783 | INFO     | collected zombie processes
[2026-01-09 09:17:59] 2026-01-09 17:17:09,783 | INFO     | will attempt to kill all subprocesses of pid=1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:09,972 | INFO     | process IDs to be killed: [1102601] (in reverse order)
[2026-01-09 09:17:59] 2026-01-09 17:17:10,051 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:17:59] 2026-01-09 17:17:10,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:17:59] 2026-01-09 17:17:10,067 | INFO     | did not find any defunct processes belonging to 1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:10,090 | INFO     | did not find any defunct processes belonging to 1102601
[2026-01-09 09:17:59] 2026-01-09 17:17:10,090 | INFO     | ready for new job
[2026-01-09 09:17:59] 2026-01-09 17:17:10,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:17:59] 2026-01-09 17:17:10,092 | INFO     | ***************************************
[2026-01-09 09:17:59] 2026-01-09 17:17:10,092 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:17:59] 2026-01-09 17:17:10,092 | INFO     | ***************************************
[2026-01-09 09:17:59] 2026-01-09 17:17:10,092 | INFO     | 
[2026-01-09 09:17:59] 2026-01-09 17:17:10,094 | INFO     | architecture information:
[2026-01-09 09:17:59] 2026-01-09 17:17:10,094 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:17:59] 2026-01-09 17:17:10,107 | INFO     | cat /etc/os-release:
[2026-01-09 09:17:59] NAME="CentOS Linux"
[2026-01-09 09:17:59] VERSION="7 (Core)"
[2026-01-09 09:17:59] ID="centos"
[2026-01-09 09:17:59] ID_LIKE="rhel fedora"
[2026-01-09 09:17:59] VERSION_ID="7"
[2026-01-09 09:17:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:17:59] ANSI_COLOR="0;31"
[2026-01-09 09:17:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:17:59] HOME_URL="https://www.centos.org/"
[2026-01-09 09:17:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:17:59] 
[2026-01-09 09:17:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:17:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:17:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:17:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:17:59] 
[2026-01-09 09:17:59] 2026-01-09 17:17:10,108 | INFO     | ***************************************
[2026-01-09 09:17:59] 2026-01-09 17:17:10,611 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 09:17:59] 2026-01-09 17:17:10,647 | INFO     | sufficient remaining disk space (2038644604928 B)
[2026-01-09 09:17:59] 2026-01-09 17:17:10,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:17:59] 2026-01-09 17:17:10,648 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:17:59] 2026-01-09 17:17:10,648 | INFO     | update_server=False
[2026-01-09 09:17:59] 2026-01-09 17:17:10,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:17:59] 2026-01-09 17:17:10,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:17:59] 2026-01-09 17:17:10,698 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:17:59] 2026-01-09 17:17:10,698 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:17:59] 2026-01-09 17:17:10,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:17:59] 2026-01-09 17:17:10,698 | INFO     | will abort loop
[2026-01-09 09:17:59] 2026-01-09 17:17:10,705 | INFO     | all data control threads have been joined
[2026-01-09 09:17:59] 2026-01-09 17:17:10,834 | INFO     | all payload control threads have been joined
[2026-01-09 09:17:59] 2026-01-09 17:17:11,324 | INFO     | all job control threads have been joined
[2026-01-09 09:17:59] 2026-01-09 17:17:11,652 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,656 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,685 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,704 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,711 | INFO     | [data] control thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:11,840 | INFO     | [payload] control thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:17:59] 2026-01-09 17:17:12,330 | INFO     | [job] control thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,451 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,657 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,668 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,789 | INFO     | [job] validate thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:12,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:13,013 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:14,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:17:59] 2026-01-09 17:17:14,157 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:18,157 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:17:59] 2026-01-09 17:17:41,215 | INFO     | PID=1095850 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:17:59] 2026-01-09 17:17:41,215 | INFO     | .. there are 21 such processes running
[2026-01-09 09:17:59] 2026-01-09 17:17:41,215 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:17:59] 2026-01-09 17:17:41,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:17:59] 2026-01-09 17:17:41,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:17:59] 2026-01-09 17:17:52,986 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:17:59] 2026-01-09 17:17:53,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464448554816)>', '<ExcThread(monitor, started 140463675795200)>']
[2026-01-09 09:17:59] 2026-01-09 17:17:54,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:17:59] 2026-01-09 17:17:54,294 | INFO     | [monitor] control thread has ended
[2026-01-09 09:17:59] 2026-01-09 17:17:58,967 | INFO     | all workflow threads have been joined
[2026-01-09 09:17:59] 2026-01-09 17:17:58,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:17:59] 2026-01-09 17:17:58,968 | INFO     | traces error code: 0
[2026-01-09 09:17:59] 2026-01-09 17:17:58,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:17:59] 2026-01-09 17:17:59,124 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:17:59] 2026-01-09 17:17:59,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:17:59] 2026-01-09 17:17:59,144 [wrapper] pilotpid: 1095850
[2026-01-09 09:17:59] 2026-01-09 17:17:59,146 [wrapper] Pilot exit status: 0
[2026-01-09 09:17:59] 2026-01-09 17:17:59,171 [wrapper] pandaids: 6963381833
[2026-01-09 09:17:59] 2026-01-09 17:17:59,209 [wrapper] cleanup supervisor_pilot 1095856 1095851
[2026-01-09 09:17:59] 2026-01-09 17:17:59,211 [wrapper] Test setup, not cleaning
[2026-01-09 09:17:59] 2026-01-09 17:17:59,213 [wrapper] apfmon messages muted
[2026-01-09 09:17:59] 2026-01-09 17:17:59,215 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:17:59] 2026-01-09 17:17:59,222 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:17:59]  *** Error codes and diagnostics ***
[2026-01-09 09:17:59]     "exeErrorCode": 65,
[2026-01-09 09:17:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 09:17:59]     "pilotErrorCode": 1305,
[2026-01-09 09:17:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 09:17:59]  *** Listing of results directory ***
[2026-01-09 09:17:59] total 388312
[2026-01-09 09:17:59] -rwx------. 1 boinc boinc     36322 Jan  8 23:17 runpilot2-wrapper.sh
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:17:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:12 run_atlas
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:12 job.xml
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc      6595 Jan  9 09:12 init_data.xml
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc 393430748 Jan  9 09:12 EVNT.47962006._000124.pool.root.1
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:12 start_atlas.sh
[2026-01-09 09:17:59] drwxrwx--x. 2 boinc boinc      4096 Jan  9 09:12 shared
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc    592616 Jan  9 09:12 input.tar.gz
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:12 boinc_lockfile
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc      2893 Jan  9 09:12 pandaJob.out
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc    989356 Jan  9 09:12 agis_schedconf.cvmfs.json
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc   1516240 Jan  9 09:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:17:59] drwx------. 5 boinc boinc      4096 Jan  9 09:12 pilot3
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc       524 Jan  9 09:14 boinc_task_state.xml
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc       993 Jan  9 09:15 memory_monitor_summary.json
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc     48828 Jan  9 09:15 log.47962010._001781.job.log.tgz.1
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc        95 Jan  9 09:16 pilot_heartbeat.json
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc     10336 Jan  9 09:17 heartbeat.json
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:17 boinc_mmap_file
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc        23 Jan  9 09:17 wrapper_checkpoint.txt
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc      5009 Jan  9 09:17 pilotlog.txt
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc     95843 Jan  9 09:17 log.47962010._001781.job.log.1
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc       186 Jan  9 09:17 output.list
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:17 runtime_log
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc    163840 Jan  9 09:17 result.tar.gz
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc      8636 Jan  9 09:17 runtime_log.err
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc       647 Jan  9 09:17 qQOKDmcvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcRhKDmEkylWm.diag
[2026-01-09 09:17:59] -rw-r--r--. 1 boinc boinc     22364 Jan  9 09:17 stderr.txt
[2026-01-09 09:17:59] No HITS result produced
[2026-01-09 09:17:59]  *** Contents of shared directory: ***
[2026-01-09 09:17:59] total 384972
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc 393430748 Jan  9 09:12 ATLAS.root_0
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:12 start_atlas.sh
[2026-01-09 09:17:59] -rw-r--r--. 2 boinc boinc    592616 Jan  9 09:12 input.tar.gz
[2026-01-09 09:17:59] -rw-------. 1 boinc boinc    163840 Jan  9 09:17 result.tar.gz
09:18:00 (1092040): run_atlas exited; CPU time 42.303673
09:18:00 (1092040): called boinc_finish(0)

</stderr_txt>
]]>

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