Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:20 (2193584): wrapper (7.7.26015): starting
11:48:20 (2193584): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:48:20] Arguments: --nthreads 8
[2026-01-09 11:48:20] Threads: 8
[2026-01-09 11:48:20] Checking for CVMFS
[2026-01-09 11:48:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:48:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:48:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:48:21] 2.13.3.0 11250 93670 349144 154950 3 492 18713409 32935936 16544 16776704 0 263342569 99.451 385994723 40046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 11:48:21] CVMFS is ok
[2026-01-09 11:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:48:21] Further information can be found at the LHC@home message board.
[2026-01-09 11:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:48:21] Checking for apptainer binary...
[2026-01-09 11:48:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:48:21] Running /usr/bin/apptainer --version
[2026-01-09 11:48:21] apptainer version 1.4.5-2.el9
[2026-01-09 11:48:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:48:21] c6-2-29-1.aglt2.org
[2026-01-09 11:48:21] apptainer works
[2026-01-09 11:48:21] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:48:21] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:48:21] Starting ATLAS job with PandaID=6963375856
[2026-01-09 11:48:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:33:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:33:07] 2026-01-11 00:31:57,388 | INFO     | time since job start (114198s) is within the limit (349056.0s)
[2026-01-10 19:33:07] 2026-01-11 00:31:58,105 | INFO     | monitor loop #7336: job 0:6963375856 is in state 'finished'
[2026-01-10 19:33:07] 2026-01-11 00:31:58,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:33:07] 2026-01-11 00:31:59,406 | INFO     | time since job start (114200s) is within the limit (349056.0s)
[2026-01-10 19:33:07] 2026-01-11 00:32:00,610 | INFO     | monitor loop #7337: job 0:6963375856 is in state 'finished'
[2026-01-10 19:33:07] 2026-01-11 00:32:00,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:33:07] 2026-01-11 00:32:01,416 | INFO     | time since job start (114202s) is within the limit (349056.0s)
[2026-01-10 19:33:07] 2026-01-11 00:32:03,133 | INFO     | monitor loop #7338: job 0:6963375856 is in state 'finished'
[2026-01-10 19:33:07] 2026-01-11 00:32:03,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:33:07] 2026-01-11 00:32:03,423 | INFO     | time since job start (114204s) is within the limit (349056.0s)
[2026-01-10 19:33:07] 2026-01-11 00:32:04,394 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 19:33:07] 2026-01-11 00:32:04,399 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3085.0727321428576
[2026-01-10 19:33:07] 2026-01-11 00:32:04,423 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963375856/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:33:07] 2026-01-11 00:32:04,428 | INFO     | extracted standard info from prmon json
[2026-01-10 19:33:07] 2026-01-11 00:32:04,428 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:33:07] 2026-01-11 00:32:04,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:33:07] 2026-01-11 00:32:04,498 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:33:07] 2026-01-11 00:32:04,500 | INFO     | sum of square deviations: 2030903799886.6057
[2026-01-10 19:33:07] 2026-01-11 00:32:04,657 | INFO     | sum of deviations: 5174520918863.215
[2026-01-10 19:33:07] 2026-01-11 00:32:04,657 | INFO     | mean x: 1768034397.0780332
[2026-01-10 19:33:07] 2026-01-11 00:32:04,657 | INFO     | mean y: 2990779.7450561197
[2026-01-10 19:33:07] 2026-01-11 00:32:04,658 | INFO     | intersect: -4501767630.50599
[2026-01-10 19:33:07] 2026-01-11 00:32:04,664 | INFO     | chi2: 13.140958444389918
[2026-01-10 19:33:07] 2026-01-11 00:32:04,672 | INFO     | sum of square deviations: 2014666104487.458
[2026-01-10 19:33:07] 2026-01-11 00:32:04,867 | INFO     | sum of deviations: 5873482522337.912
[2026-01-10 19:33:07] 2026-01-11 00:32:04,868 | INFO     | mean x: 1768034244.5836012
[2026-01-10 19:33:07] 2026-01-11 00:32:04,868 | INFO     | mean y: 2997343.337084673
[2026-01-10 19:33:07] 2026-01-11 00:32:04,872 | INFO     | intersect: -5151463840.740151
[2026-01-10 19:33:07] 2026-01-11 00:32:04,875 | INFO     | chi2: 9.518556410014869
[2026-01-10 19:33:07] 2026-01-11 00:32:04,875 | INFO     | current chi2=9.518556410014869 (change=27.56573692630091 %)
[2026-01-10 19:33:07] 2026-01-11 00:32:04,884 | INFO     | sum of square deviations: 1998515201413.1963
[2026-01-10 19:33:07] 2026-01-11 00:32:05,072 | INFO     | sum of deviations: 6377746988060.01
[2026-01-10 19:33:07] 2026-01-11 00:32:05,072 | INFO     | mean x: 1768034092.0891993
[2026-01-10 19:33:07] 2026-01-11 00:32:05,072 | INFO     | mean y: 3002102.433637829
[2026-01-10 19:33:07] 2026-01-11 00:32:05,073 | INFO     | intersect: -5639223734.845825
[2026-01-10 19:33:07] 2026-01-11 00:32:05,077 | INFO     | chi2: 7.388723686593915
[2026-01-10 19:33:07] 2026-01-11 00:32:05,078 | INFO     | current chi2=7.388723686593915 (change=22.37558545306375 %)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,078 | INFO     | right removable region: 1860
[2026-01-10 19:33:07] 2026-01-11 00:32:05,084 | INFO     | sum of square deviations: 2014663732807.4597
[2026-01-10 19:33:07] 2026-01-11 00:32:05,268 | INFO     | sum of deviations: 4557150772526.092
[2026-01-10 19:33:07] 2026-01-11 00:32:05,269 | INFO     | mean x: 1768034549.5836012
[2026-01-10 19:33:07] 2026-01-11 00:32:05,269 | INFO     | mean y: 2996574.989817792
[2026-01-10 19:33:07] 2026-01-11 00:32:05,269 | INFO     | intersect: -3996281260.9495416
[2026-01-10 19:33:07] 2026-01-11 00:32:05,279 | INFO     | chi2: 10.465011874897904
[2026-01-10 19:33:07] 2026-01-11 00:32:05,279 | INFO     | current chi2=10.465011874897904 (change=20.36340485221166 %)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,279 | INFO     | left removable region: 10
[2026-01-10 19:33:07] 2026-01-11 00:32:05,282 | INFO     | sum of square deviations: 1963283173800.0002
[2026-01-10 19:33:07] 2026-01-11 00:32:05,393 | INFO     | sum of deviations: 5699719269878.797
[2026-01-10 19:33:07] 2026-01-11 00:32:05,393 | INFO     | mean x: 1768034366.6
[2026-01-10 19:33:07] 2026-01-11 00:32:05,393 | INFO     | mean y: 3009872.7497297297
[2026-01-10 19:33:07] 2026-01-11 00:32:05,393 | INFO     | intersect: -5129871457.666311
[2026-01-10 19:33:07] 2026-01-11 00:32:05,395 | INFO     | chi2: 4.4364368931654985
[2026-01-10 19:33:07] 2026-01-11 00:32:05,396 | INFO     | current memory leak: 2.90 B/s (using 1850 data points, chi2=4.44)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,398 | INFO     | could have reported an average CPU frequency of 2987 MHz (66 samples)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,398 | INFO     | ..............................
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . Timing measurements:
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . get job = 0 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . initial setup = 2 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . payload setup = 12 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . stage-in = 0 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . payload execution = 114138 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . stage-out = 5 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | . log creation = 1 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,399 | INFO     | ..............................
[2026-01-10 19:33:07] 2026-01-11 00:32:05,447 | INFO     | time since job start (114206s) is within the limit (349056.0s)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,523 | INFO     | 
[2026-01-10 19:33:07] 2026-01-11 00:32:05,523 | INFO     | job summary report
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | --------------------------------------------------
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | PanDA job id: 6963375856
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | task id: 47962010
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | errors: (none)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | pilot state: finished 
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | transexitcode: 0
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | exeerrorcode: 0
[2026-01-10 19:33:07] 2026-01-11 00:32:05,524 | INFO     | exeerrordiag: 
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | exitcode: 0
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | exitmsg: OK
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | cpuconsumptiontime: 269862 s
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | nevents: 900
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | neventsw: 0
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | pid: 2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | pgrp: 2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | corecount: 8
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | event service: False
[2026-01-10 19:33:07] 2026-01-11 00:32:05,525 | INFO     | sizes: {0: 2283794, 1: 2284650, 8: 2284912, 12: 2284940, 114154: 2364206, 114155: 2364205, 114161: 2373439, 114187: 2373629}
[2026-01-10 19:33:07] 2026-01-11 00:32:05,526 | INFO     | --------------------------------------------------
[2026-01-10 19:33:07] 2026-01-11 00:32:05,526 | INFO     | 
[2026-01-10 19:33:07] 2026-01-11 00:32:05,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:33:07] 2026-01-11 00:32:05,667 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | job 6963375856 has completed (purged errors)
[2026-01-10 19:33:07] 2026-01-11 00:32:05,669 | INFO     | overall cleanup function is called
[2026-01-10 19:33:07] 2026-01-11 00:32:06,752 | INFO     | --- collectZombieJob: --- 10, [2204546]
[2026-01-10 19:33:07] 2026-01-11 00:32:06,752 | INFO     | zombie collector waiting for pid 2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:06,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:33:07] 2026-01-11 00:32:06,752 | INFO     | collected zombie processes
[2026-01-10 19:33:07] 2026-01-11 00:32:06,752 | INFO     | will attempt to kill all subprocesses of pid=2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:07,200 | INFO     | process IDs to be killed: [2204546] (in reverse order)
[2026-01-10 19:33:07] 2026-01-11 00:32:07,653 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:33:07] 2026-01-11 00:32:07,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:33:07] 2026-01-11 00:32:07,676 | INFO     | did not find any defunct processes belonging to 2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:07,700 | INFO     | did not find any defunct processes belonging to 2204546
[2026-01-10 19:33:07] 2026-01-11 00:32:07,700 | INFO     | ready for new job
[2026-01-10 19:33:07] 2026-01-11 00:32:07,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:33:07] 2026-01-11 00:32:07,707 | INFO     | ***************************************
[2026-01-10 19:33:07] 2026-01-11 00:32:07,707 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:33:07] 2026-01-11 00:32:07,707 | INFO     | ***************************************
[2026-01-10 19:33:07] 2026-01-11 00:32:07,708 | INFO     | 
[2026-01-10 19:33:07] 2026-01-11 00:32:07,711 | INFO     | architecture information:
[2026-01-10 19:33:07] 2026-01-11 00:32:07,714 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:33:07] 2026-01-11 00:32:07,754 | INFO     | cat /etc/os-release:
[2026-01-10 19:33:07] NAME="CentOS Linux"
[2026-01-10 19:33:07] VERSION="7 (Core)"
[2026-01-10 19:33:07] ID="centos"
[2026-01-10 19:33:07] ID_LIKE="rhel fedora"
[2026-01-10 19:33:07] VERSION_ID="7"
[2026-01-10 19:33:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:33:07] ANSI_COLOR="0;31"
[2026-01-10 19:33:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:33:07] HOME_URL="https://www.centos.org/"
[2026-01-10 19:33:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:33:07] 
[2026-01-10 19:33:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:33:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:33:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:33:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:33:07] 
[2026-01-10 19:33:07] 2026-01-11 00:32:07,755 | INFO     | ***************************************
[2026-01-10 19:33:07] 2026-01-11 00:32:08,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:33:07] 2026-01-11 00:32:08,327 | INFO     | sufficient remaining disk space (75006738432 B)
[2026-01-10 19:33:07] 2026-01-11 00:32:08,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:33:07] 2026-01-11 00:32:08,328 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:33:07] 2026-01-11 00:32:08,328 | INFO     | update_server=False
[2026-01-10 19:33:07] 2026-01-11 00:32:08,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:33:07] 2026-01-11 00:32:08,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:33:07] 2026-01-11 00:32:08,584 | INFO     | all payload control threads have been joined
[2026-01-10 19:33:07] 2026-01-11 00:32:09,108 | INFO     | all data control threads have been joined
[2026-01-10 19:33:07] 2026-01-11 00:32:09,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:33:07] 2026-01-11 00:32:09,151 | INFO     | aborting loop
[2026-01-10 19:33:07] 2026-01-11 00:32:09,333 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:33:07] 2026-01-11 00:32:09,523 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,530 | INFO     | all job control threads have been joined
[2026-01-10 19:33:07] 2026-01-11 00:32:09,643 | INFO     | [payload] control thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,644 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,872 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,879 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:09,911 | INFO     | [job] validate thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,115 | INFO     | [data] control thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,157 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,174 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,444 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,536 | INFO     | [job] control thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:10,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:33:07] 2026-01-11 00:32:10,874 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:11,533 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:11,551 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:12,337 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:33:07] 2026-01-11 00:32:39,372 | INFO     | PID=2197273 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:33:07] 2026-01-11 00:32:39,372 | INFO     | .. there are 16 such processes running
[2026-01-10 19:33:07] 2026-01-11 00:32:39,375 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:33:07] 2026-01-11 00:32:39,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:33:07] 2026-01-11 00:32:39,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:33:07] 2026-01-11 00:32:59,217 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:33:07] 2026-01-11 00:32:59,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232600840000)>', '<ExcThread(monitor, started 140231672059648)>']
[2026-01-10 19:33:07] 2026-01-11 00:33:00,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:33:07] 2026-01-11 00:33:00,531 | INFO     | [monitor] control thread has ended
[2026-01-10 19:33:07] 2026-01-11 00:33:04,593 | INFO     | all workflow threads have been joined
[2026-01-10 19:33:07] 2026-01-11 00:33:04,594 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:33:07] 2026-01-11 00:33:04,595 | INFO     | traces error code: 0
[2026-01-10 19:33:07] 2026-01-11 00:33:04,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:33:07] 2026-01-11 00:33:05,294 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:33:07] 2026-01-11 00:33:05,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:33:07] 2026-01-11 00:33:05,352 [wrapper] pilotpid: 2197273
[2026-01-10 19:33:07] 2026-01-11 00:33:05,426 [wrapper] Pilot exit status: 0
[2026-01-10 19:33:07] 2026-01-11 00:33:05,561 [wrapper] pandaids: 6963375856
[2026-01-10 19:33:07] 2026-01-11 00:33:06,334 [wrapper] cleanup supervisor_pilot 3502824 2197274
[2026-01-10 19:33:07] 2026-01-11 00:33:06,347 [wrapper] Test setup, not cleaning
[2026-01-10 19:33:07] 2026-01-11 00:33:06,403 [wrapper] apfmon messages muted
[2026-01-10 19:33:07] 2026-01-11 00:33:06,423 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:33:07] 2026-01-11 00:33:06,447 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:33:07]  *** Error codes and diagnostics ***
[2026-01-10 19:33:07]     "exeErrorCode": 0,
[2026-01-10 19:33:07]     "exeErrorDiag": "",
[2026-01-10 19:33:07]     "pilotErrorCode": 0,
[2026-01-10 19:33:07]     "pilotErrorDiag": "",
[2026-01-10 19:33:07]  *** Listing of results directory ***
[2026-01-10 19:33:07] total 1200608
[2026-01-10 19:33:07] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:21 queuedata.json
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:33:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:48 run_atlas
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:48 job.xml
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas 391547733 Jan  9 11:48 EVNT.47962006._000081.pool.root.1
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:48 start_atlas.sh
[2026-01-10 19:33:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:48 shared
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas    592615 Jan  9 11:48 input.tar.gz
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:48 boinc_lockfile
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 11:48 pandaJob.out
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas        57 Jan  9 11:48 setup.sh.local
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas    989356 Jan  9 11:48 agis_schedconf.cvmfs.json
[2026-01-10 19:33:07] drwx------. 5 boincer umatlas      4096 Jan  9 11:48 pilot3
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas       534 Jan 10 18:48 boinc_task_state.xml
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas      6845 Jan 10 19:27 init_data.xml
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas 798498789 Jan 10 19:29 HITS.47962010._001029.pool.root.1
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas      1061 Jan 10 19:31 memory_monitor_summary.json
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas   2765202 Jan 10 19:31 log.47962010._001029.job.log.tgz.1
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas      8634 Jan 10 19:32 heartbeat.json
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas        95 Jan 10 19:32 pilot_heartbeat.json
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas      4824 Jan 10 19:33 pilotlog.txt
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:33 boinc_mmap_file
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas        30 Jan 10 19:33 wrapper_checkpoint.txt
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas  14963639 Jan 10 19:33 log.47962010._001029.job.log.1
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas       353 Jan 10 19:33 output.list
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:33 runtime_log
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas  17745920 Jan 10 19:33 result.tar.gz
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas      9349 Jan 10 19:33 runtime_log.err
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas       666 Jan 10 19:33 j69LDmFvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmibmKDmy7nXAn.diag
[2026-01-10 19:33:07] -rw-r--r--. 1 boincer umatlas     21459 Jan 10 19:33 stderr.txt
[2026-01-10 19:33:07] HITS file was successfully produced:
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas 798498789 Jan 10 19:29 shared/HITS.pool.root.1
[2026-01-10 19:33:07]  *** Contents of shared directory: ***
[2026-01-10 19:33:07] total 1180088
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas 391547733 Jan  9 11:48 ATLAS.root_0
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:48 start_atlas.sh
[2026-01-10 19:33:07] -rw-r--r--. 2 boincer umatlas    592615 Jan  9 11:48 input.tar.gz
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas 798498789 Jan 10 19:29 HITS.pool.root.1
[2026-01-10 19:33:07] -rw-------. 1 boincer umatlas  17745920 Jan 10 19:33 result.tar.gz
19:33:09 (2193584): run_atlas exited; CPU time 271262.311985
19:33:09 (2193584): called boinc_finish(0)

</stderr_txt>
]]>

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