Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:05 (6604): wrapper (7.7.26015): starting
20:15:05 (6604): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:15:05] Arguments: --nthreads 8
[2026-01-09 20:15:05] Threads: 8
[2026-01-09 20:15:05] Checking for CVMFS
[2026-01-09 20:15:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:15:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:15:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:15:05] 2.11.2.0 31129 28129 97692 154955 0 56 20980913 25165824 0 130560 0 3898213 99.768 2613410 2558 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:15:05] CVMFS is ok
[2026-01-09 20:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:15:05] Checking for apptainer binary...
[2026-01-09 20:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:15:05] Running /usr/bin/apptainer --version
[2026-01-09 20:15:05] apptainer version 1.3.2-1.el7
[2026-01-09 20:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:15:07] cg-vwn364.simple-grid.lan
[2026-01-09 20:15:07] apptainer works
[2026-01-09 20:15:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:15:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:15:07] Starting ATLAS job with PandaID=6963375776
[2026-01-09 20:15:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:05:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:05:01] 2026-01-10 19:03:59,180 | INFO     | monitor loop #5716: job 0:6963375776 is in state 'finished'
[2026-01-10 20:05:01] 2026-01-10 19:03:59,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:01] 2026-01-10 19:04:00,122 | INFO     | time since job start (85720s) is within the limit (349056.0s)
[2026-01-10 20:05:01] 2026-01-10 19:04:01,693 | INFO     | monitor loop #5717: job 0:6963375776 is in state 'finished'
[2026-01-10 20:05:01] 2026-01-10 19:04:01,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:01] 2026-01-10 19:04:02,130 | INFO     | time since job start (85722s) is within the limit (349056.0s)
[2026-01-10 20:05:01] 2026-01-10 19:04:04,138 | INFO     | time since job start (85724s) is within the limit (349056.0s)
[2026-01-10 20:05:01] 2026-01-10 19:04:04,201 | INFO     | monitor loop #5718: job 0:6963375776 is in state 'finished'
[2026-01-10 20:05:01] 2026-01-10 19:04:04,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:01] 2026-01-10 19:04:06,145 | INFO     | time since job start (85726s) is within the limit (349056.0s)
[2026-01-10 20:05:01] 2026-01-10 19:04:06,706 | INFO     | monitor loop #5719: job 0:6963375776 is in state 'finished'
[2026-01-10 20:05:01] 2026-01-10 19:04:06,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:01] 2026-01-10 19:04:08,152 | INFO     | time since job start (85728s) is within the limit (349056.0s)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,240 | INFO     | monitor loop #5720: job 0:6963375776 is in state 'finished'
[2026-01-10 20:05:01] 2026-01-10 19:04:09,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,320 | INFO     | PID=10361 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,320 | INFO     | .. there are 2 such processes running
[2026-01-10 20:05:01] 2026-01-10 19:04:09,334 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 20:05:01] 2026-01-10 19:04:09,335 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 20:05:01] 2026-01-10 19:04:09,337 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963375776/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,338 | INFO     | extracted standard info from prmon json
[2026-01-10 20:05:01] 2026-01-10 19:04:09,338 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:05:01] 2026-01-10 19:04:09,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:05:01] 2026-01-10 19:04:09,379 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:05:01] 2026-01-10 19:04:09,385 | INFO     | sum of square deviations: 856354942126.4102
[2026-01-10 20:05:01] 2026-01-10 19:04:09,478 | INFO     | sum of deviations: 197958497875.03882
[2026-01-10 20:05:01] 2026-01-10 19:04:09,478 | INFO     | mean x: 1768028913.91732
[2026-01-10 20:05:01] 2026-01-10 19:04:09,478 | INFO     | mean y: 2842347.5951532433
[2026-01-10 20:05:01] 2026-01-10 19:04:09,478 | INFO     | intersect: -405862420.46472967
[2026-01-10 20:05:01] 2026-01-10 19:04:09,486 | INFO     | chi2: 23.12300686821865
[2026-01-10 20:05:01] 2026-01-10 19:04:09,488 | INFO     | sum of square deviations: 847232363604.6837
[2026-01-10 20:05:01] 2026-01-10 19:04:09,562 | INFO     | sum of deviations: 671205156437.4924
[2026-01-10 20:05:01] 2026-01-10 19:04:09,562 | INFO     | mean x: 1768028761.420601
[2026-01-10 20:05:01] 2026-01-10 19:04:09,562 | INFO     | mean y: 2850258.108011445
[2026-01-10 20:05:01] 2026-01-10 19:04:09,562 | INFO     | intersect: -1397839885.9113405
[2026-01-10 20:05:01] 2026-01-10 19:04:09,564 | INFO     | chi2: 19.667324666821667
[2026-01-10 20:05:01] 2026-01-10 19:04:09,564 | INFO     | current chi2=19.667324666821667 (change=14.944778683375452 %)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,564 | INFO     | right removable region: 1397
[2026-01-10 20:05:01] 2026-01-10 19:04:09,567 | INFO     | sum of square deviations: 847231578534.6838
[2026-01-10 20:05:01] 2026-01-10 19:04:09,629 | INFO     | sum of deviations: -228982198089.30136
[2026-01-10 20:05:01] 2026-01-10 19:04:09,629 | INFO     | mean x: 1768029066.420601
[2026-01-10 20:05:01] 2026-01-10 19:04:09,630 | INFO     | mean y: 2849481.357653791
[2026-01-10 20:05:01] 2026-01-10 19:04:09,630 | INFO     | intersect: 480696615.68539184
[2026-01-10 20:05:01] 2026-01-10 19:04:09,632 | INFO     | chi2: 20.680967608111683
[2026-01-10 20:05:01] 2026-01-10 19:04:09,632 | INFO     | current chi2=20.680967608111683 (change=10.56108002745707 %)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,632 | INFO     | left removable region: 10
[2026-01-10 20:05:01] 2026-01-10 19:04:09,634 | INFO     | sum of square deviations: 827389679420.7905
[2026-01-10 20:05:01] 2026-01-10 19:04:09,694 | INFO     | sum of deviations: 267058970826.1295
[2026-01-10 20:05:01] 2026-01-10 19:04:09,694 | INFO     | mean x: 1768029035.927902
[2026-01-10 20:05:01] 2026-01-10 19:04:09,694 | INFO     | mean y: 2860544.2912761355
[2026-01-10 20:05:01] 2026-01-10 19:04:09,694 | INFO     | intersect: -567811324.6836402
[2026-01-10 20:05:01] 2026-01-10 19:04:09,696 | INFO     | chi2: 16.355620571914205
[2026-01-10 20:05:01] 2026-01-10 19:04:09,696 | INFO     | current memory leak: 0.32 B/s (using 1387 data points, chi2=16.36)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,698 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,698 | INFO     | ..............................
[2026-01-10 20:05:01] 2026-01-10 19:04:09,698 | INFO     | . Timing measurements:
[2026-01-10 20:05:01] 2026-01-10 19:04:09,698 | INFO     | . get job = 0 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . initial setup = 1 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . payload setup = 7 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . stage-in = 0 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . payload execution = 85580 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . stage-out = 5 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | . log creation = 2 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,699 | INFO     | ..............................
[2026-01-10 20:05:01] 2026-01-10 19:04:09,968 | INFO     | 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,968 | INFO     | job summary report
[2026-01-10 20:05:01] 2026-01-10 19:04:09,968 | INFO     | --------------------------------------------------
[2026-01-10 20:05:01] 2026-01-10 19:04:09,968 | INFO     | PanDA job id: 6963375776
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | task id: 47962010
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | errors: (none)
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | pilot state: finished 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | transexitcode: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | exeerrorcode: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | exeerrordiag: 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,969 | INFO     | exitcode: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | exitmsg: OK
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | cpuconsumptiontime: 359122 s
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | nevents: 900
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | neventsw: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | pid: 16812
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | pgrp: 16812
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | corecount: 8
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | event service: False
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | sizes: {0: 2284450, 1: 2284649, 5: 2284911, 12: 2284967, 85592: 2345850, 85599: 2355030, 85713: 2355220}
[2026-01-10 20:05:01] 2026-01-10 19:04:09,970 | INFO     | --------------------------------------------------
[2026-01-10 20:05:01] 2026-01-10 19:04:09,971 | INFO     | 
[2026-01-10 20:05:01] 2026-01-10 19:04:09,971 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-10 20:05:01] 2026-01-10 19:04:10,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | job 6963375776 has completed (purged errors)
[2026-01-10 20:05:01] 2026-01-10 19:04:10,299 | INFO     | overall cleanup function is called
[2026-01-10 20:05:01] 2026-01-10 19:04:11,332 | INFO     | --- collectZombieJob: --- 10, [16812]
[2026-01-10 20:05:01] 2026-01-10 19:04:11,332 | INFO     | zombie collector waiting for pid 16812
[2026-01-10 20:05:01] 2026-01-10 19:04:11,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:05:01] 2026-01-10 19:04:11,332 | INFO     | collected zombie processes
[2026-01-10 20:05:01] 2026-01-10 19:04:11,332 | INFO     | will attempt to kill all subprocesses of pid=16812
[2026-01-10 20:05:01] 2026-01-10 19:04:11,420 | INFO     | process IDs to be killed: [16812] (in reverse order)
[2026-01-10 20:05:01] 2026-01-10 19:04:11,598 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:05:01] 2026-01-10 19:04:11,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:05:01] 2026-01-10 19:04:11,600 | INFO     | did not find any defunct processes belonging to 16812
[2026-01-10 20:05:01] 2026-01-10 19:04:11,602 | INFO     | did not find any defunct processes belonging to 16812
[2026-01-10 20:05:01] 2026-01-10 19:04:11,602 | INFO     | ready for new job
[2026-01-10 20:05:01] 2026-01-10 19:04:11,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:05:01] 2026-01-10 19:04:11,607 | INFO     | ***************************************
[2026-01-10 20:05:01] 2026-01-10 19:04:11,608 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:05:01] 2026-01-10 19:04:11,608 | INFO     | ***************************************
[2026-01-10 20:05:01] 2026-01-10 19:04:11,608 | INFO     | 
[2026-01-10 20:05:01] 2026-01-10 19:04:11,608 | INFO     | pilot is running in a VM
[2026-01-10 20:05:01] 2026-01-10 19:04:11,608 | INFO     | architecture information:
[2026-01-10 20:05:01] 2026-01-10 19:04:11,623 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:05:01] 2026-01-10 19:04:11,917 | INFO     | cat /etc/os-release:
[2026-01-10 20:05:01] NAME="CentOS Linux"
[2026-01-10 20:05:01] VERSION="7 (Core)"
[2026-01-10 20:05:01] ID="centos"
[2026-01-10 20:05:01] ID_LIKE="rhel fedora"
[2026-01-10 20:05:01] VERSION_ID="7"
[2026-01-10 20:05:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:05:01] ANSI_COLOR="0;31"
[2026-01-10 20:05:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:05:01] HOME_URL="https://www.centos.org/"
[2026-01-10 20:05:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:05:01] 
[2026-01-10 20:05:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:05:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:05:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:05:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:05:01] 
[2026-01-10 20:05:01] 2026-01-10 19:04:11,918 | INFO     | ***************************************
[2026-01-10 20:05:01] 2026-01-10 19:04:12,421 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-10 20:05:01] 2026-01-10 19:04:12,530 | INFO     | sufficient remaining disk space (496341352448 B)
[2026-01-10 20:05:01] 2026-01-10 19:04:12,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:05:01] 2026-01-10 19:04:12,530 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:05:01] 2026-01-10 19:04:12,530 | INFO     | update_server=False
[2026-01-10 20:05:01] 2026-01-10 19:04:12,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:05:01] 2026-01-10 19:04:12,561 | INFO     | all job control threads have been joined
[2026-01-10 20:05:01] 2026-01-10 19:04:12,754 | INFO     | all payload control threads have been joined
[2026-01-10 20:05:01] 2026-01-10 19:04:12,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:05:01] 2026-01-10 19:04:12,756 | INFO     | aborting loop
[2026-01-10 20:05:01] 2026-01-10 19:04:12,933 | INFO     | all data control threads have been joined
[2026-01-10 20:05:01] 2026-01-10 19:04:13,536 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:13,537 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:13,567 | INFO     | [job] control thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:13,760 | INFO     | [payload] control thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:13,762 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:13,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:05:01] 2026-01-10 19:04:13,939 | INFO     | [data] control thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,038 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,248 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,277 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,524 | INFO     | [job] validate thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:05:01] 2026-01-10 19:04:14,755 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:05:01] 2026-01-10 19:04:14,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:14,980 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:15,847 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:15,925 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:18,697 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:05:01] 2026-01-10 19:04:41,445 | INFO     | PID=10361 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 20:05:01] 2026-01-10 19:04:41,446 | INFO     | .. there are 2 such processes running
[2026-01-10 20:05:01] 2026-01-10 19:04:41,446 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:05:01] 2026-01-10 19:04:41,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:05:01] 2026-01-10 19:04:41,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:05:01] 2026-01-10 19:04:50,375 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:05:01] 2026-01-10 19:04:51,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140308839302976)>', '<ExcThread(monitor, started 140308092270336)>']
[2026-01-10 20:05:01] 2026-01-10 19:04:52,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:05:01] 2026-01-10 19:04:52,513 | INFO     | [monitor] control thread has ended
[2026-01-10 20:05:01] 2026-01-10 19:04:56,539 | INFO     | all workflow threads have been joined
[2026-01-10 20:05:01] 2026-01-10 19:04:56,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:05:01] 2026-01-10 19:04:56,540 | INFO     | traces error code: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:56,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:05:01] 2026-01-10 19:04:56,870 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:05:01] 2026-01-10 19:04:56,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:05:01] 2026-01-10 19:04:57,030 [wrapper] pilotpid: 10361
[2026-01-10 20:05:01] 2026-01-10 19:04:57,089 [wrapper] Pilot exit status: 0
[2026-01-10 20:05:01] 2026-01-10 19:04:57,538 [wrapper] pandaids: 6963375776
[2026-01-10 20:05:01] 2026-01-10 19:04:57,989 [wrapper] cleanup supervisor_pilot  1787 10362
[2026-01-10 20:05:01] 2026-01-10 19:04:58,108 [wrapper] Test setup, not cleaning
[2026-01-10 20:05:01] 2026-01-10 19:04:58,165 [wrapper] apfmon messages muted
[2026-01-10 20:05:01] 2026-01-10 19:04:58,263 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:05:01] 2026-01-10 19:04:58,330 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:05:01]  *** Error codes and diagnostics ***
[2026-01-10 20:05:01]     "exeErrorCode": 0,
[2026-01-10 20:05:01]     "exeErrorDiag": "",
[2026-01-10 20:05:01]     "pilotErrorCode": 0,
[2026-01-10 20:05:01]     "pilotErrorDiag": "",
[2026-01-10 20:05:01]  *** Listing of results directory ***
[2026-01-10 20:05:01] total 1203048
[2026-01-10 20:05:01] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:05:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:15 run_atlas
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:15 job.xml
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc 393525946 Jan  9 20:15 EVNT.47962006._000076.pool.root.1
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc    592615 Jan  9 20:15 input.tar.gz
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc      6391 Jan  9 20:15 init_data.xml
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:15 start_atlas.sh
[2026-01-10 20:05:01] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:15 shared
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:15 boinc_lockfile
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc      2891 Jan  9 20:15 pandaJob.out
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc    989364 Jan  9 20:15 agis_schedconf.cvmfs.json
[2026-01-10 20:05:01] drwx------. 5 boinc boinc      4096 Jan  9 20:15 pilot3
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc       533 Jan 10 19:27 boinc_task_state.xml
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc 806762913 Jan 10 20:00 HITS.47962010._000973.pool.root.1
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc      1033 Jan 10 20:02 memory_monitor_summary.json
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc   1516240 Jan 10 20:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc   2445559 Jan 10 20:02 log.47962010._000973.job.log.tgz.1
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc      8610 Jan 10 20:04 heartbeat.json
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc        95 Jan 10 20:04 pilot_heartbeat.json
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc        29 Jan 10 20:04 wrapper_checkpoint.txt
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc      8192 Jan 10 20:04 boinc_mmap_file
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc      4885 Jan 10 20:04 pilotlog.txt
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc  11415934 Jan 10 20:04 log.47962010._000973.job.log.1
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc       353 Jan 10 20:05 output.list
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc       620 Jan 10 20:05 runtime_log
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc  13885440 Jan 10 20:05 result.tar.gz
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc      8833 Jan 10 20:05 runtime_log.err
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc       662 Jan 10 20:05 jdxLDmFvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXbmKDmKwESem.diag
[2026-01-10 20:05:01] -rw-r--r--. 1 boinc boinc     21349 Jan 10 20:05 stderr.txt
[2026-01-10 20:05:01] HITS file was successfully produced:
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc 806762913 Jan 10 20:00 shared/HITS.pool.root.1
[2026-01-10 20:05:01]  *** Contents of shared directory: ***
[2026-01-10 20:05:01] total 1186316
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc 393525946 Jan  9 20:15 ATLAS.root_0
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc    592615 Jan  9 20:15 input.tar.gz
[2026-01-10 20:05:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:15 start_atlas.sh
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc 806762913 Jan 10 20:00 HITS.pool.root.1
[2026-01-10 20:05:01] -rw-------. 1 boinc boinc  13885440 Jan 10 20:05 result.tar.gz
20:05:02 (6604): run_atlas exited; CPU time 359528.480869
20:05:02 (6604): called boinc_finish(0)

</stderr_txt>
]]>

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