Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:07 (1477754): wrapper (7.7.26015): starting
08:21:07 (1477754): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 08:21:07] Arguments: --nthreads 12
[2026-01-09 08:21:07] Threads: 12
[2026-01-09 08:21:07] Checking for CVMFS
[2026-01-09 08:21:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:21:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:21:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:21:09] 2.11.5.0 3990553 56799 146196 154950 3 191 25423955 45568001 12235 130560 0 359772830 99.794 201432234 22689 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 08:21:09] CVMFS is ok
[2026-01-09 08:21:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:21:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:21:09] Further information can be found at the LHC@home message board.
[2026-01-09 08:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:21:09] Checking for apptainer binary...
[2026-01-09 08:21:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:21:09] Running /usr/bin/apptainer --version
[2026-01-09 08:21:09] apptainer version 1.4.1-1.el9
[2026-01-09 08:21:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:21:10] wns0082.triumf.lcg
[2026-01-09 08:21:10] apptainer works
[2026-01-09 08:21:10] Set ATHENA_PROC_NUMBER=12
[2026-01-09 08:21:10] Set ATHENA_CORE_NUMBER=12
[2026-01-09 08:21:10] Starting ATLAS job with PandaID=6963197062
[2026-01-09 08:21:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:26:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | WARNING  | wrong length of table data, x=[1767975775.0, 1767975836.0], y=[1692.0, 253337.0] (must be same and length>=4)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . Timing measurements:
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . get job = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . initial setup = 4 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . payload setup = 17 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-in = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . payload execution = 83 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-out = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . log creation = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197062/pilotlog.txt
[2026-01-09 08:26:53] 2026-01-09 16:26:18,548 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:26:53] - Log from pilotlog.txt -
[2026-01-09 08:26:53] 2026-01-09 16:26:18,535 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963197062/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | INFO     | extracted standard info from prmon json
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | WARNING  | wrong length of table data, x=[1767975775.0, 1767975836.0], y=[1692.0, 253337.0] (must be same and length>=4)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . Timing measurements:
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . get job = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . initial setup = 4 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . payload setup = 17 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-in = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . payload execution = 83 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-out = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . log creation = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197062/pilotlog.txt
[2026-01-09 08:26:53] 2026-01-09 16:26:18,549 | WARNING  | 
[2026-01-09 08:26:53] [begin log extracts]
[2026-01-09 08:26:53] - Log from pilotlog.txt -
[2026-01-09 08:26:53] 2026-01-09 16:26:18,535 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963197062/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | INFO     | extracted standard info from prmon json
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:26:53] 2026-01-09 16:26:18,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | WARNING  | wrong length of table data, x=[1767975775.0, 1767975836.0], y=[1692.0, 253337.0] (must be same and length>=4)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . Timing measurements:
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . get job = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . initial setup = 4 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,537 | INFO     | . payload setup = 17 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-in = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . payload execution = 83 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . stage-out = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | . log creation = 0 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | ..............................
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:26:53] 2026-01-09 16:26:18,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197062/pilotlog.txt
[2026-01-09 08:26:53] [end log extracts]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,549 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,549 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | 
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | job summary report
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | --------------------------------------------------
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | PanDA job id: 6963197062
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | task id: 47962010
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 08:23:56,608 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | pilot state: failed 
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | transexitcode: 65
[2026-01-09 08:26:53] 2026-01-09 16:26:18,603 | INFO     | exeerrorcode: 65
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | exitcode: 65
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | cpuconsumptiontime: 38 s
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | nevents: 0
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | neventsw: 0
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | pid: 1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | pgrp: 1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | corecount: 12
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | event service: False
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | sizes: {0: 2284390, 1: 2284474, 2: 2284673, 13: 2284673, 19: 2284991, 23: 2285019, 105: 2310554, 106: 2314844, 108: 2314872, 238: 2315038}
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | --------------------------------------------------
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | 
[2026-01-09 08:26:53] 2026-01-09 16:26:18,604 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | job 6963197062 has completed (purged errors)
[2026-01-09 08:26:53] 2026-01-09 16:26:18,619 | INFO     | overall cleanup function is called
[2026-01-09 08:26:53] 2026-01-09 16:26:19,626 | INFO     | --- collectZombieJob: --- 10, [1488129]
[2026-01-09 08:26:53] 2026-01-09 16:26:19,626 | INFO     | zombie collector waiting for pid 1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:19,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:26:53] 2026-01-09 16:26:19,626 | INFO     | collected zombie processes
[2026-01-09 08:26:53] 2026-01-09 16:26:19,626 | INFO     | will attempt to kill all subprocesses of pid=1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:19,903 | INFO     | process IDs to be killed: [1488129] (in reverse order)
[2026-01-09 08:26:53] 2026-01-09 16:26:19,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:26:53] 2026-01-09 16:26:19,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:26:53] 2026-01-09 16:26:19,969 | INFO     | did not find any defunct processes belonging to 1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:19,975 | INFO     | did not find any defunct processes belonging to 1488129
[2026-01-09 08:26:53] 2026-01-09 16:26:19,975 | INFO     | ready for new job
[2026-01-09 08:26:53] 2026-01-09 16:26:19,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:26:53] 2026-01-09 16:26:19,976 | INFO     | ***************************************
[2026-01-09 08:26:53] 2026-01-09 16:26:19,976 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:26:53] 2026-01-09 16:26:19,976 | INFO     | ***************************************
[2026-01-09 08:26:53] 2026-01-09 16:26:19,976 | INFO     | 
[2026-01-09 08:26:53] 2026-01-09 16:26:19,978 | INFO     | architecture information:
[2026-01-09 08:26:53] 2026-01-09 16:26:19,979 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:26:53] 2026-01-09 16:26:19,993 | INFO     | cat /etc/os-release:
[2026-01-09 08:26:53] NAME="CentOS Linux"
[2026-01-09 08:26:53] VERSION="7 (Core)"
[2026-01-09 08:26:53] ID="centos"
[2026-01-09 08:26:53] ID_LIKE="rhel fedora"
[2026-01-09 08:26:53] VERSION_ID="7"
[2026-01-09 08:26:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:26:53] ANSI_COLOR="0;31"
[2026-01-09 08:26:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:26:53] HOME_URL="https://www.centos.org/"
[2026-01-09 08:26:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:26:53] 
[2026-01-09 08:26:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:26:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:26:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:26:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:26:53] 
[2026-01-09 08:26:53] 2026-01-09 16:26:19,994 | INFO     | ***************************************
[2026-01-09 08:26:53] 2026-01-09 16:26:20,497 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | INFO     | sufficient remaining disk space (1985077051392 B)
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | INFO     | update_server=False
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:26:53] 2026-01-09 16:26:20,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:26:53] 2026-01-09 16:26:20,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:26:53] 2026-01-09 16:26:20,510 | INFO     | aborting loop
[2026-01-09 08:26:53] 2026-01-09 16:26:20,556 | INFO     | all job control threads have been joined
[2026-01-09 08:26:53] 2026-01-09 16:26:21,045 | INFO     | all data control threads have been joined
[2026-01-09 08:26:53] 2026-01-09 16:26:21,166 | INFO     | all payload control threads have been joined
[2026-01-09 08:26:53] 2026-01-09 16:26:21,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:26:53] 2026-01-09 16:26:21,516 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,516 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,516 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,552 | INFO     | [job] validate thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,562 | INFO     | [job] control thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,620 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:21,963 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,032 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,051 | INFO     | [data] control thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,165 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,172 | INFO     | [payload] control thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,447 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,525 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,594 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:22,996 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:25,435 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:26:53] 2026-01-09 16:26:28,822 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:26:53] 2026-01-09 16:26:29,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698865633088)>', '<ExcThread(monitor, started 140698472924928)>']
[2026-01-09 08:26:53] 2026-01-09 16:26:34,705 | INFO     | all workflow threads have been joined
[2026-01-09 08:26:53] 2026-01-09 16:26:34,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:26:53] 2026-01-09 16:26:34,705 | INFO     | traces error code: 0
[2026-01-09 08:26:53] 2026-01-09 16:26:34,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:26:53] 2026-01-09 16:26:51,520 | INFO     | PID=1481441 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:26:53] 2026-01-09 16:26:51,520 | INFO     | .. there are 21 such processes running
[2026-01-09 08:26:53] 2026-01-09 16:26:51,521 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:26:53] 2026-01-09 16:26:51,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:26:53] 2026-01-09 16:26:51,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:26:53] 2026-01-09 16:26:51,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:26:53] 2026-01-09 16:26:51,521 | INFO     | [monitor] control thread has ended
[2026-01-09 08:26:53] 2026-01-09 16:26:52,063 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:26:53] 2026-01-09 16:26:52,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:26:53] 2026-01-09 16:26:52,088 [wrapper] pilotpid: 1481441
[2026-01-09 08:26:53] 2026-01-09 16:26:52,119 [wrapper] Pilot exit status: 0
[2026-01-09 08:26:53] 2026-01-09 16:26:52,232 [wrapper] pandaids: 6963197062
[2026-01-09 08:26:53] 2026-01-09 16:26:52,508 [wrapper] cleanup supervisor_pilot 1481447 1481442
[2026-01-09 08:26:53] 2026-01-09 16:26:52,598 [wrapper] Test setup, not cleaning
[2026-01-09 08:26:53] 2026-01-09 16:26:52,637 [wrapper] apfmon messages muted
[2026-01-09 08:26:53] 2026-01-09 16:26:52,697 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:26:53] 2026-01-09 16:26:52,706 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:26:53]  *** Error codes and diagnostics ***
[2026-01-09 08:26:53]     "exeErrorCode": 65,
[2026-01-09 08:26:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:26:53]     "pilotErrorCode": 1305,
[2026-01-09 08:26:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:26:53]  *** Listing of results directory ***
[2026-01-09 08:26:53] total 387732
[2026-01-09 08:26:53] -rwx------. 1 boinc boinc     36322 Jan  8 23:17 runpilot2-wrapper.sh
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:20 queuedata.json
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:26:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:21 run_atlas
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:21 job.xml
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc      6595 Jan  9 08:21 init_data.xml
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc 392826066 Jan  9 08:21 EVNT.47962006._000063.pool.root.1
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc    592614 Jan  9 08:21 input.tar.gz
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:21 start_atlas.sh
[2026-01-09 08:26:53] drwxrwx--x. 2 boinc boinc      4096 Jan  9 08:21 shared
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:21 boinc_lockfile
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc      2891 Jan  9 08:21 pandaJob.out
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc    989356 Jan  9 08:21 agis_schedconf.cvmfs.json
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc   1516240 Jan  9 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:26:53] drwx------. 5 boinc boinc      4096 Jan  9 08:21 pilot3
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc       525 Jan  9 08:23 boinc_task_state.xml
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc       989 Jan  9 08:24 memory_monitor_summary.json
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc     49392 Jan  9 08:24 log.47962010._000735.job.log.tgz.1
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc     10328 Jan  9 08:26 heartbeat.json
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc       823 Jan  9 08:26 pilotlog.txt
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc        95 Jan  9 08:26 pilot_heartbeat.json
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:26 boinc_mmap_file
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:26 wrapper_checkpoint.txt
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc     99016 Jan  9 08:26 log.47962010._000735.job.log.1
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc       186 Jan  9 08:26 output.list
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:26 runtime_log
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc    174080 Jan  9 08:26 result.tar.gz
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc       647 Jan  9 08:26 YmsKDmFvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtOhKDmnhgJSo.diag
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc      8636 Jan  9 08:26 runtime_log.err
[2026-01-09 08:26:53] -rw-r--r--. 1 boinc boinc     21672 Jan  9 08:26 stderr.txt
[2026-01-09 08:26:53] No HITS result produced
[2026-01-09 08:26:53]  *** Contents of shared directory: ***
[2026-01-09 08:26:53] total 384388
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc 392826066 Jan  9 08:21 ATLAS.root_0
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc    592614 Jan  9 08:21 input.tar.gz
[2026-01-09 08:26:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:21 start_atlas.sh
[2026-01-09 08:26:53] -rw-------. 1 boinc boinc    174080 Jan  9 08:26 result.tar.gz
08:26:54 (1477754): run_atlas exited; CPU time 42.808527
08:26:54 (1477754): called boinc_finish(0)

</stderr_txt>
]]>

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