Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:31 (3344629): wrapper (7.7.26015): starting
08:23:31 (3344629): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:23:31] Arguments: --nthreads 8
[2026-01-09 08:23:31] Threads: 8
[2026-01-09 08:23:31] Checking for CVMFS
[2026-01-09 08:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:23:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:23:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:23:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:23:31] 2.11.3.0 4062081 56890 184636 154950 2 88 32511420 45568000 8934 130560 0 259237315 99.787 154040131 20362 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 08:23:31] CVMFS is ok
[2026-01-09 08:23:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:23:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:23:31] Further information can be found at the LHC@home message board.
[2026-01-09 08:23:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:23:31] Checking for apptainer binary...
[2026-01-09 08:23:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:23:31] Running /usr/bin/apptainer --version
[2026-01-09 08:23:31] apptainer version 1.4.1-1.el9
[2026-01-09 08:23:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:23:32] wns0019.triumf.lcg
[2026-01-09 08:23:32] apptainer works
[2026-01-09 08:23:32] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:23:32] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:23:32] Starting ATLAS job with PandaID=6963197035
[2026-01-09 08:23:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:28:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:28:59] 2026-01-09 16:28:40,497 | WARNING  | wrong length of table data, x=[1767975896.0, 1767975957.0], y=[1541.0, 494771.0] (must be same and length>=4)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . Timing measurements:
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . get job = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . initial setup = 2 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload setup = 16 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-in = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload execution = 107 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-out = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . log creation = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197035/pilotlog.txt
[2026-01-09 08:28:59] 2026-01-09 16:28:40,628 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:28:59] - Log from pilotlog.txt -
[2026-01-09 08:28:59] 2026-01-09 16:28:40,489 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963197035/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,490 | INFO     | extracted standard info from prmon json
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:28:59] 2026-01-09 16:28:40,497 | WARNING  | wrong length of table data, x=[1767975896.0, 1767975957.0], y=[1541.0, 494771.0] (must be same and length>=4)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . Timing measurements:
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . get job = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . initial setup = 2 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload setup = 16 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-in = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload execution = 107 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-out = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . log creation = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197035/pilotlog.txt
[2026-01-09 08:28:59] 2026-01-09 16:28:40,630 | WARNING  | 
[2026-01-09 08:28:59] [begin log extracts]
[2026-01-09 08:28:59] - Log from pilotlog.txt -
[2026-01-09 08:28:59] 2026-01-09 16:28:40,489 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963197035/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,490 | INFO     | extracted standard info from prmon json
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:28:59] 2026-01-09 16:28:40,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:28:59] 2026-01-09 16:28:40,497 | WARNING  | wrong length of table data, x=[1767975896.0, 1767975957.0], y=[1541.0, 494771.0] (must be same and length>=4)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . Timing measurements:
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . get job = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . initial setup = 2 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload setup = 16 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-in = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . payload execution = 107 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . stage-out = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | . log creation = 0 s
[2026-01-09 08:28:59] 2026-01-09 16:28:40,498 | INFO     | ..............................
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:28:59] 2026-01-09 16:28:40,499 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963197035/pilotlog.txt
[2026-01-09 08:28:59] [end log extracts]
[2026-01-09 08:28:59] 2026-01-09 16:28:40,630 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:28:59] 2026-01-09 16:28:40,631 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | 
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | job summary report
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | --------------------------------------------------
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | PanDA job id: 6963197035
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | task id: 47962010
[2026-01-09 08:28:59] 2026-01-09 16:28:41,507 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 08:26:24,126 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | pilot state: failed 
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | transexitcode: 65
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | exeerrorcode: 65
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | exitcode: 65
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | cpuconsumptiontime: 48 s
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | nevents: 0
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | neventsw: 0
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | pid: 3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:41,508 | INFO     | pgrp: 3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | corecount: 8
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | event service: False
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | sizes: {0: 2284390, 1: 2284645, 12: 2284645, 17: 2284935, 22: 2284963, 127: 2310417, 128: 2314867, 131: 2314867, 255: 2315061}
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | --------------------------------------------------
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | 
[2026-01-09 08:28:59] 2026-01-09 16:28:41,509 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:28:59] 2026-01-09 16:28:41,551 | INFO     | time since job start (289s) is within the limit (349056.0s)
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:28:59] 2026-01-09 16:28:41,563 | INFO     | job 6963197035 has completed (purged errors)
[2026-01-09 08:28:59] 2026-01-09 16:28:41,564 | INFO     | overall cleanup function is called
[2026-01-09 08:28:59] 2026-01-09 16:28:42,571 | INFO     | --- collectZombieJob: --- 10, [3354907]
[2026-01-09 08:28:59] 2026-01-09 16:28:42,571 | INFO     | zombie collector waiting for pid 3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:42,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:28:59] 2026-01-09 16:28:42,571 | INFO     | collected zombie processes
[2026-01-09 08:28:59] 2026-01-09 16:28:42,571 | INFO     | will attempt to kill all subprocesses of pid=3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:42,741 | INFO     | process IDs to be killed: [3354907] (in reverse order)
[2026-01-09 08:28:59] 2026-01-09 16:28:42,880 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:28:59] 2026-01-09 16:28:42,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:28:59] 2026-01-09 16:28:42,885 | INFO     | did not find any defunct processes belonging to 3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:42,890 | INFO     | did not find any defunct processes belonging to 3354907
[2026-01-09 08:28:59] 2026-01-09 16:28:42,890 | INFO     | ready for new job
[2026-01-09 08:28:59] 2026-01-09 16:28:42,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:28:59] 2026-01-09 16:28:42,891 | INFO     | ***************************************
[2026-01-09 08:28:59] 2026-01-09 16:28:42,891 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:28:59] 2026-01-09 16:28:42,891 | INFO     | ***************************************
[2026-01-09 08:28:59] 2026-01-09 16:28:42,891 | INFO     | 
[2026-01-09 08:28:59] 2026-01-09 16:28:42,893 | INFO     | architecture information:
[2026-01-09 08:28:59] 2026-01-09 16:28:42,893 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:28:59] 2026-01-09 16:28:42,909 | INFO     | cat /etc/os-release:
[2026-01-09 08:28:59] NAME="CentOS Linux"
[2026-01-09 08:28:59] VERSION="7 (Core)"
[2026-01-09 08:28:59] ID="centos"
[2026-01-09 08:28:59] ID_LIKE="rhel fedora"
[2026-01-09 08:28:59] VERSION_ID="7"
[2026-01-09 08:28:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:28:59] ANSI_COLOR="0;31"
[2026-01-09 08:28:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:28:59] HOME_URL="https://www.centos.org/"
[2026-01-09 08:28:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:28:59] 
[2026-01-09 08:28:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:28:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:28:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:28:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:28:59] 
[2026-01-09 08:28:59] 2026-01-09 16:28:42,910 | INFO     | ***************************************
[2026-01-09 08:28:59] 2026-01-09 16:28:43,413 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:28:59] 2026-01-09 16:28:43,424 | INFO     | sufficient remaining disk space (1343752241152 B)
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | INFO     | update_server=False
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:28:59] 2026-01-09 16:28:43,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:28:59] 2026-01-09 16:28:43,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:28:59] 2026-01-09 16:28:43,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:28:59] 2026-01-09 16:28:43,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:28:59] 2026-01-09 16:28:43,676 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:28:59] 2026-01-09 16:28:43,676 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:28:59] 2026-01-09 16:28:43,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:28:59] 2026-01-09 16:28:43,676 | INFO     | will abort loop
[2026-01-09 08:28:59] 2026-01-09 16:28:43,775 | INFO     | all data control threads have been joined
[2026-01-09 08:28:59] 2026-01-09 16:28:44,006 | INFO     | all payload control threads have been joined
[2026-01-09 08:28:59] 2026-01-09 16:28:44,411 | INFO     | all job control threads have been joined
[2026-01-09 08:28:59] 2026-01-09 16:28:44,433 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,433 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,606 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,606 | INFO     | [job] validate thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,648 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,682 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,781 | INFO     | [data] control thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:44,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:28:59] 2026-01-09 16:28:45,012 | INFO     | [payload] control thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,097 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,253 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,417 | INFO     | [job] control thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,436 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,478 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:45,575 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:49,013 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:28:59] 2026-01-09 16:28:52,435 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:28:59] 2026-01-09 16:28:53,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903792170816)>', '<ExcThread(monitor, started 139903471949568)>']
[2026-01-09 08:28:59] 2026-01-09 16:28:53,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:28:59] 2026-01-09 16:28:53,495 | INFO     | [monitor] control thread has ended
[2026-01-09 08:28:59] 2026-01-09 16:28:58,350 | INFO     | all workflow threads have been joined
[2026-01-09 08:28:59] 2026-01-09 16:28:58,350 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:28:59] 2026-01-09 16:28:58,350 | INFO     | traces error code: 0
[2026-01-09 08:28:59] 2026-01-09 16:28:58,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:28:59] 2026-01-09 16:28:58,550 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:28:59] 2026-01-09 16:28:58,579 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:28:59] 2026-01-09 16:28:58,632 [wrapper] pilotpid: 3348294
[2026-01-09 08:28:59] 2026-01-09 16:28:58,646 [wrapper] Pilot exit status: 0
[2026-01-09 08:28:59] 2026-01-09 16:28:58,795 [wrapper] pandaids: 6963197035
[2026-01-09 08:28:59] 2026-01-09 16:28:58,861 [wrapper] cleanup supervisor_pilot 3348300 3348295
[2026-01-09 08:28:59] 2026-01-09 16:28:58,868 [wrapper] Test setup, not cleaning
[2026-01-09 08:28:59] 2026-01-09 16:28:58,870 [wrapper] apfmon messages muted
[2026-01-09 08:28:59] 2026-01-09 16:28:58,872 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:28:59] 2026-01-09 16:28:58,873 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:28:59]  *** Error codes and diagnostics ***
[2026-01-09 08:28:59]     "exeErrorCode": 65,
[2026-01-09 08:28:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:28:59]     "pilotErrorCode": 1305,
[2026-01-09 08:28:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:28:59]  *** Listing of results directory ***
[2026-01-09 08:28:59] total 387128
[2026-01-09 08:28:59] -rwx------. 1 boinc boinc     36322 Jan  8 23:17 runpilot2-wrapper.sh
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:20 queuedata.json
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:28:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:23 run_atlas
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:23 job.xml
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc      6445 Jan  9 08:23 init_data.xml
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc 392203700 Jan  9 08:23 EVNT.47962006._000062.pool.root.1
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:23 start_atlas.sh
[2026-01-09 08:28:59] drwxrwx--x. 2 boinc boinc      4096 Jan  9 08:23 shared
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc    592611 Jan  9 08:23 input.tar.gz
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:23 boinc_lockfile
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc      2891 Jan  9 08:23 pandaJob.out
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc    989356 Jan  9 08:23 agis_schedconf.cvmfs.json
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc   1516240 Jan  9 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:28:59] drwx------. 5 boinc boinc      4096 Jan  9 08:23 pilot3
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc       986 Jan  9 08:26 memory_monitor_summary.json
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc     48924 Jan  9 08:26 log.47962010._000708.job.log.tgz.1
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc       524 Jan  9 08:26 boinc_task_state.xml
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc        95 Jan  9 08:27 pilot_heartbeat.json
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc     10324 Jan  9 08:28 heartbeat.json
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:28 wrapper_checkpoint.txt
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:28 boinc_mmap_file
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc      4737 Jan  9 08:28 pilotlog.txt
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc     99956 Jan  9 08:28 log.47962010._000708.job.log.1
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc       186 Jan  9 08:28 output.list
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:28 runtime_log
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc    174080 Jan  9 08:28 result.tar.gz
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc       646 Jan  9 08:28 ZCJODmEvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfOhKDmJED57m.diag
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc      8634 Jan  9 08:28 runtime_log.err
[2026-01-09 08:28:59] -rw-r--r--. 1 boinc boinc     22342 Jan  9 08:28 stderr.txt
[2026-01-09 08:28:59] No HITS result produced
[2026-01-09 08:28:59]  *** Contents of shared directory: ***
[2026-01-09 08:28:59] total 383784
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc 392203700 Jan  9 08:23 ATLAS.root_0
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:23 start_atlas.sh
[2026-01-09 08:28:59] -rw-r--r--. 2 boinc boinc    592611 Jan  9 08:23 input.tar.gz
[2026-01-09 08:28:59] -rw-------. 1 boinc boinc    174080 Jan  9 08:28 result.tar.gz
08:29:00 (3344629): run_atlas exited; CPU time 50.656001
08:29:00 (3344629): called boinc_finish(0)

</stderr_txt>
]]>

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