Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:28:43 (154329): wrapper (7.7.26015): starting
11:28:43 (154329): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 11:28:43] Arguments: --nthreads 12
[2026-01-09 11:28:43] Threads: 12
[2026-01-09 11:28:43] Checking for CVMFS
[2026-01-09 11:28:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:28:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:28:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:28:45] 2.8.1.0 25995 79 52532 154950 1 57 2097046 4096001 0 130560 0 74925 99.985 5470 882 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 11:28:45] CVMFS is ok
[2026-01-09 11:28:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:28:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:28:45] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 11:28:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 11:28:45] Further information can be found at the LHC@home message board.
[2026-01-09 11:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:28:45] Checking for apptainer binary...
[2026-01-09 11:28:45] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 11:28:45] apptainer is not installed, using version from CVMFS
[2026-01-09 11:28:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:28:46] farmville.blisteringsheep.pec
[2026-01-09 11:28:46] apptainer works
[2026-01-09 11:28:46] Set ATHENA_PROC_NUMBER=12
[2026-01-09 11:28:46] Set ATHENA_CORE_NUMBER=12
[2026-01-09 11:28:46] Starting ATLAS job with PandaID=6963169964
[2026-01-09 11:28:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:58:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:58:25] 2026-01-09 18:58:09,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,611 | INFO     | time since job start (8950s) is within the limit (349056.0s)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,657 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:58:25] 2026-01-09 18:58:09,660 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2624.9812083333336
[2026-01-09 13:58:25] 2026-01-09 18:58:09,664 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6963169964/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,665 | INFO     | extracted standard info from prmon json
[2026-01-09 13:58:25] 2026-01-09 18:58:09,665 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:58:25] 2026-01-09 18:58:09,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:58:25] 2026-01-09 18:58:09,666 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | sum of square deviations: 984942975.3197275
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | sum of deviations: 84008852396.37405
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | mean x: 1767980615.0680273
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | mean y: 3307644.462585034
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | intersect: -150793262565.7942
[2026-01-09 13:58:25] 2026-01-09 18:58:09,667 | INFO     | chi2: 6.175222519066381
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | sum of square deviations: 887818622.7957741
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | sum of deviations: 122914203740.04227
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | mean x: 1767980462.5704226
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | mean y: 3368077.295774648
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | intersect: -244764994744.919
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | chi2: 4.162334117880753
[2026-01-09 13:58:25] 2026-01-09 18:58:09,668 | INFO     | current chi2=4.162334117880753 (change=32.59620839525557 %)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | sum of square deviations: 797299045.2700719
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | sum of deviations: 117824500297.78104
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | mean x: 1767980310.0729928
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | mean y: 3359393.02189781
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | intersect: -261267988925.35507
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | chi2: 4.141276378926565
[2026-01-09 13:58:25] 2026-01-09 18:58:09,669 | INFO     | current chi2=4.141276378926565 (change=0.505911787901088 %)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | right removable region: 136
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | sum of square deviations: 887812522.7957741
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | sum of deviations: 22090475509.774643
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | mean x: 1767980767.5704226
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | mean y: 3404645.4225352113
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | intersect: -43987342100.04891
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | chi2: 2.5302420070855427
[2026-01-09 13:58:25] 2026-01-09 18:58:09,670 | INFO     | current chi2=2.5302420070855427 (change=59.02589745918848 %)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | sum of square deviations: 797286845.2700719
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | sum of deviations: 3617207576.4379635
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | mean x: 1767980920.0729928
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | mean y: 3435449.9562043794
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | intersect: -8017710285.766433
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | chi2: 2.160500544532246
[2026-01-09 13:58:25] 2026-01-09 18:58:09,671 | INFO     | current chi2=2.160500544532246 (change=14.612889261892514 %)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | left removable region: 20
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | sum of square deviations: 483968092.13793045
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | sum of deviations: 28259045723.965515
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | mean x: 1767980889.586207
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | mean y: 3525572.603448276
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | intersect: -103229422238.4991
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | chi2: 0.003780035151623203
[2026-01-09 13:58:25] 2026-01-09 18:58:09,672 | INFO     | current memory leak: 58.39 B/s (using 116 data points, chi2=0.00)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | could have reported an average CPU frequency of 2821 MHz (8 samples)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | ..............................
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . Timing measurements:
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . get job = 0 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . initial setup = 2 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . payload setup = 6 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . stage-in = 0 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . payload execution = 8917 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . stage-out = 0 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | . log creation = 0 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,673 | INFO     | ..............................
[2026-01-09 13:58:25] 2026-01-09 18:58:09,721 | INFO     | 
[2026-01-09 13:58:25] 2026-01-09 18:58:09,721 | INFO     | job summary report
[2026-01-09 13:58:25] 2026-01-09 18:58:09,721 | INFO     | --------------------------------------------------
[2026-01-09 13:58:25] 2026-01-09 18:58:09,721 | INFO     | PanDA job id: 6963169964
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | task id: 47962010
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | errors: (none)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | pilot state: finished 
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | transexitcode: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | exeerrorcode: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | exeerrordiag: 
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | exitcode: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | exitmsg: OK
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | cpuconsumptiontime: 100473 s
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | nevents: 450
[2026-01-09 13:58:25] 2026-01-09 18:58:09,722 | INFO     | neventsw: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | pid: 166205
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | pgrp: 166205
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | corecount: 12
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | event service: False
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | sizes: {0: 2284450, 1: 2284649, 3: 2284911, 11: 2284939, 8927: 2313970, 8929: 2322966, 8931: 2323150, 8937: 2323396}
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | --------------------------------------------------
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | 
[2026-01-09 13:58:25] 2026-01-09 18:58:09,723 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-01-09 13:58:25] 2026-01-09 18:58:09,736 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,736 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | job 6963169964 has completed (purged errors)
[2026-01-09 13:58:25] 2026-01-09 18:58:09,738 | INFO     | overall cleanup function is called
[2026-01-09 13:58:25] 2026-01-09 18:58:10,753 | INFO     | --- collectZombieJob: --- 10, [166205]
[2026-01-09 13:58:25] 2026-01-09 18:58:10,753 | INFO     | zombie collector waiting for pid 166205
[2026-01-09 13:58:25] 2026-01-09 18:58:10,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:58:25] 2026-01-09 18:58:10,753 | INFO     | collected zombie processes
[2026-01-09 13:58:25] 2026-01-09 18:58:10,753 | INFO     | will attempt to kill all subprocesses of pid=166205
[2026-01-09 13:58:25] 2026-01-09 18:58:10,897 | INFO     | PID=158963 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 13:58:25] 2026-01-09 18:58:11,003 | INFO     | process IDs to be killed: [166205] (in reverse order)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,045 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:58:25] 2026-01-09 18:58:11,051 | INFO     | did not find any defunct processes belonging to 166205
[2026-01-09 13:58:25] 2026-01-09 18:58:11,056 | INFO     | did not find any defunct processes belonging to 166205
[2026-01-09 13:58:25] 2026-01-09 18:58:11,056 | INFO     | ready for new job
[2026-01-09 13:58:25] 2026-01-09 18:58:11,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:58:25] 2026-01-09 18:58:11,059 | INFO     | ***************************************
[2026-01-09 13:58:25] 2026-01-09 18:58:11,059 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:58:25] 2026-01-09 18:58:11,059 | INFO     | ***************************************
[2026-01-09 13:58:25] 2026-01-09 18:58:11,059 | INFO     | 
[2026-01-09 13:58:25] 2026-01-09 18:58:11,061 | INFO     | architecture information:
[2026-01-09 13:58:25] 2026-01-09 18:58:11,062 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:58:25] 2026-01-09 18:58:11,071 | INFO     | cat /etc/os-release:
[2026-01-09 13:58:25] NAME="CentOS Linux"
[2026-01-09 13:58:25] VERSION="7 (Core)"
[2026-01-09 13:58:25] ID="centos"
[2026-01-09 13:58:25] ID_LIKE="rhel fedora"
[2026-01-09 13:58:25] VERSION_ID="7"
[2026-01-09 13:58:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:58:25] ANSI_COLOR="0;31"
[2026-01-09 13:58:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:58:25] HOME_URL="https://www.centos.org/"
[2026-01-09 13:58:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:58:25] 
[2026-01-09 13:58:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:58:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:58:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:58:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:58:25] 
[2026-01-09 13:58:25] 2026-01-09 18:58:11,071 | INFO     | ***************************************
[2026-01-09 13:58:25] 2026-01-09 18:58:11,574 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-01-09 13:58:25] 2026-01-09 18:58:11,584 | INFO     | sufficient remaining disk space (384727777280 B)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:58:25] 2026-01-09 18:58:11,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:58:25] 2026-01-09 18:58:11,584 | INFO     | update_server=False
[2026-01-09 13:58:25] 2026-01-09 18:58:11,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:58:25] 2026-01-09 18:58:11,585 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,586 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:58:25] 2026-01-09 18:58:11,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:58:25] 2026-01-09 18:58:11,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:58:25] 2026-01-09 18:58:11,628 | INFO     | all job control threads have been joined
[2026-01-09 13:58:25] 2026-01-09 18:58:11,813 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 13:58:25] 2026-01-09 18:58:11,814 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 13:58:25] 2026-01-09 18:58:11,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:58:25] 2026-01-09 18:58:11,814 | INFO     | will abort loop
[2026-01-09 13:58:25] 2026-01-09 18:58:11,930 | INFO     | all payload control threads have been joined
[2026-01-09 13:58:25] 2026-01-09 18:58:12,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:58:25] 2026-01-09 18:58:12,532 | INFO     | all data control threads have been joined
[2026-01-09 13:58:25] 2026-01-09 18:58:12,586 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,590 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,628 | INFO     | [job] control thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,675 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,802 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,819 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:12,935 | INFO     | [payload] control thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,157 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:58:25] 2026-01-09 18:58:13,212 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,537 | INFO     | [data] control thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,621 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,647 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,692 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:13,869 | INFO     | [job] validate thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:14,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:14,310 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:14,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:58:25] 2026-01-09 18:58:18,397 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:58:25] 2026-01-09 18:58:20,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558227720000)>', '<ExcThread(monitor, started 140557686920960)>']
[2026-01-09 13:58:25] 2026-01-09 18:58:20,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:58:25] 2026-01-09 18:58:20,629 | INFO     | [monitor] control thread has ended
[2026-01-09 13:58:25] 2026-01-09 18:58:25,386 | INFO     | all workflow threads have been joined
[2026-01-09 13:58:25] 2026-01-09 18:58:25,386 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:58:25] 2026-01-09 18:58:25,386 | INFO     | traces error code: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:25,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:58:25] 2026-01-09 18:58:25,448 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:58:25] 2026-01-09 18:58:25,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:58:25] 2026-01-09 18:58:25,451 [wrapper] pilotpid: 158963
[2026-01-09 13:58:25] 2026-01-09 18:58:25,452 [wrapper] Pilot exit status: 0
[2026-01-09 13:58:25] 2026-01-09 18:58:25,457 [wrapper] pandaids: 6963169964
[2026-01-09 13:58:25] 2026-01-09 18:58:25,493 [wrapper] cleanup supervisor_pilot  346363 158964
[2026-01-09 13:58:25] 2026-01-09 18:58:25,495 [wrapper] Test setup, not cleaning
[2026-01-09 13:58:25] 2026-01-09 18:58:25,496 [wrapper] apfmon messages muted
[2026-01-09 13:58:25] 2026-01-09 18:58:25,498 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:58:25] 2026-01-09 18:58:25,499 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:58:25]  *** Error codes and diagnostics ***
[2026-01-09 13:58:25]     "exeErrorCode": 0,
[2026-01-09 13:58:25]     "exeErrorDiag": "",
[2026-01-09 13:58:25]     "pilotErrorCode": 0,
[2026-01-09 13:58:25]     "pilotErrorDiag": "",
[2026-01-09 13:58:25]  *** Listing of results directory ***
[2026-01-09 13:58:25] total 766192
[2026-01-09 13:58:25] -rwx------ 1 boinc boinc     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:20 queuedata.json
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc       100 Jan  9 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:58:25] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 11:28 run_atlas
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc       105 Jan  9 11:28 job.xml
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc 389443902 Jan  9 11:28 EVNT.47962006._000051.pool.root.1
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc    592611 Jan  9 11:28 input.tar.gz
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:28 start_atlas.sh
[2026-01-09 13:58:25] drwxrwx--x 1 boinc boinc        76 Jan  9 11:28 shared
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:28 boinc_setup_complete
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc      9259 Jan  9 11:28 init_data.xml
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:28 boinc_lockfile
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc      2891 Jan  9 11:28 pandaJob.out
[2026-01-09 13:58:25] -rw------- 1 boinc boinc    989356 Jan  9 11:28 agis_schedconf.cvmfs.json
[2026-01-09 13:58:25] -rw------- 1 boinc boinc   1516240 Jan  9 11:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:58:25] drwx------ 1 boinc boinc       414 Jan  9 11:28 pilot3
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc       530 Jan  9 13:51 boinc_task_state.xml
[2026-01-09 13:58:25] -rw------- 1 boinc boinc 385047540 Jan  9 13:57 HITS.47962010._000464.pool.root.1
[2026-01-09 13:58:25] -rw------- 1 boinc boinc      1043 Jan  9 13:57 memory_monitor_summary.json
[2026-01-09 13:58:25] -rw------- 1 boinc boinc   1819111 Jan  9 13:58 log.47962010._000464.job.log.tgz.1
[2026-01-09 13:58:25] -rw------- 1 boinc boinc        95 Jan  9 13:58 pilot_heartbeat.json
[2026-01-09 13:58:25] -rw------- 1 boinc boinc      8613 Jan  9 13:58 heartbeat.json
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc      8192 Jan  9 13:58 boinc_mmap_file
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc        27 Jan  9 13:58 wrapper_checkpoint.txt
[2026-01-09 13:58:25] -rw------- 1 boinc boinc      4740 Jan  9 13:58 pilotlog.txt
[2026-01-09 13:58:25] -rw------- 1 boinc boinc   1269917 Jan  9 13:58 log.47962010._000464.job.log.1
[2026-01-09 13:58:25] -rw------- 1 boinc boinc       353 Jan  9 13:58 output.list
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc       620 Jan  9 13:58 runtime_log
[2026-01-09 13:58:25] -rw------- 1 boinc boinc   3112960 Jan  9 13:58 result.tar.gz
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc      8920 Jan  9 13:58 runtime_log.err
[2026-01-09 13:58:25] -rw------- 1 boinc boinc       677 Jan  9 13:58 GCDMDm3uLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIZmKDmxytmUm.diag
[2026-01-09 13:58:25] -rw-r--r-- 1 boinc boinc     21558 Jan  9 13:58 stderr.txt
[2026-01-09 13:58:25] HITS file was successfully produced:
[2026-01-09 13:58:25] -rw------- 1 boinc boinc 385047540 Jan  9 13:57 shared/HITS.pool.root.1
[2026-01-09 13:58:25]  *** Contents of shared directory: ***
[2026-01-09 13:58:25] total 759980
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc 389443902 Jan  9 11:28 ATLAS.root_0
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc    592611 Jan  9 11:28 input.tar.gz
[2026-01-09 13:58:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:28 start_atlas.sh
[2026-01-09 13:58:25] -rw------- 1 boinc boinc 385047540 Jan  9 13:57 HITS.pool.root.1
[2026-01-09 13:58:25] -rw------- 1 boinc boinc   3112960 Jan  9 13:58 result.tar.gz
13:58:27 (154329): run_atlas exited; CPU time 100527.452469
13:58:27 (154329): called boinc_finish(0)

</stderr_txt>
]]>

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