Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:02 (5545): wrapper (7.7.26015): starting
11:13:02 (5545): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:13:02] Arguments: --nthreads 8
[2026-01-09 11:13:02] Threads: 8
[2026-01-09 11:13:02] Checking for CVMFS
[2026-01-09 11:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:13:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:13:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:13:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:13:03] 2.11.2.0 28705 181427 139272 154948 2 59 11055480 18432001 1833 130560 0 122117829 99.980 7088005 33940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:13:03] CVMFS is ok
[2026-01-09 11:13:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:13:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:13:03] Further information can be found at the LHC@home message board.
[2026-01-09 11:13:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:13:03] Checking for apptainer binary...
[2026-01-09 11:13:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:13:03] Running /usr/bin/apptainer --version
[2026-01-09 11:13:03] apptainer version 1.3.2-1.el7
[2026-01-09 11:13:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:13:04] c-206-27.aglt2.org
[2026-01-09 11:13:04] apptainer works
[2026-01-09 11:13:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:13:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:13:04] Starting ATLAS job with PandaID=6963169969
[2026-01-09 11:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:52:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:52:23] 2026-01-10 02:51:34,791 | INFO     | sufficient remaining disk space (27699183616 B)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,794 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,799 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:52:23] 2026-01-10 02:51:34,800 | INFO     | sum of square deviations: 76798991986.06998
[2026-01-09 21:52:23] 2026-01-10 02:51:34,807 | INFO     | sum of deviations: 589640751818.1029
[2026-01-09 21:52:23] 2026-01-10 02:51:34,807 | INFO     | mean x: 1767994344.3089173
[2026-01-09 21:52:23] 2026-01-10 02:51:34,808 | INFO     | mean y: 2756094.2675159234
[2026-01-09 21:52:23] 2026-01-10 02:51:34,808 | INFO     | intersect: -13571400120.92802
[2026-01-09 21:52:23] 2026-01-10 02:51:34,808 | INFO     | chi2: 4.9979194187893405
[2026-01-09 21:52:23] 2026-01-10 02:51:34,809 | INFO     | sum of square deviations: 74979336057.77197
[2026-01-09 21:52:23] 2026-01-10 02:51:34,816 | INFO     | sum of deviations: 754438076744.1562
[2026-01-09 21:52:23] 2026-01-10 02:51:34,816 | INFO     | mean x: 1767994191.8154094
[2026-01-09 21:52:23] 2026-01-10 02:51:34,817 | INFO     | mean y: 2769884.879614767
[2026-01-09 21:52:23] 2026-01-10 02:51:34,817 | INFO     | intersect: -17786693291.218983
[2026-01-09 21:52:23] 2026-01-10 02:51:34,818 | INFO     | chi2: 2.5659676974918106
[2026-01-09 21:52:23] 2026-01-10 02:51:34,818 | INFO     | current chi2=2.5659676974918106 (change=48.65928234366428 %)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,818 | INFO     | sum of square deviations: 73188657416.92061
[2026-01-09 21:52:23] 2026-01-10 02:51:34,825 | INFO     | sum of deviations: 801526194524.6799
[2026-01-09 21:52:23] 2026-01-10 02:51:34,826 | INFO     | mean x: 1767994039.3220065
[2026-01-09 21:52:23] 2026-01-10 02:51:34,826 | INFO     | mean y: 2773887.0970873786
[2026-01-09 21:52:23] 2026-01-10 02:51:34,826 | INFO     | intersect: -19359427638.30574
[2026-01-09 21:52:23] 2026-01-10 02:51:34,827 | INFO     | chi2: 2.271906258833712
[2026-01-09 21:52:23] 2026-01-10 02:51:34,827 | INFO     | current chi2=2.271906258833712 (change=11.46006003682505 %)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,827 | INFO     | right removable region: 617
[2026-01-09 21:52:23] 2026-01-10 02:51:34,828 | INFO     | sum of square deviations: 74979026177.77205
[2026-01-09 21:52:23] 2026-01-10 02:51:34,835 | INFO     | sum of deviations: 431089900255.6177
[2026-01-09 21:52:23] 2026-01-10 02:51:34,835 | INFO     | mean x: 1767994496.8154094
[2026-01-09 21:52:23] 2026-01-10 02:51:34,835 | INFO     | mean y: 2769353.8314606743
[2026-01-09 21:52:23] 2026-01-10 02:51:34,835 | INFO     | intersect: -10162267592.335009
[2026-01-09 21:52:23] 2026-01-10 02:51:34,836 | INFO     | chi2: 2.9199244179854253
[2026-01-09 21:52:23] 2026-01-10 02:51:34,836 | INFO     | current chi2=2.9199244179854253 (change=41.5772009647021 %)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,837 | INFO     | sum of square deviations: 73188151667.83768
[2026-01-09 21:52:23] 2026-01-10 02:51:34,845 | INFO     | sum of deviations: 387980832397.17224
[2026-01-09 21:52:23] 2026-01-10 02:51:34,845 | INFO     | mean x: 1767994649.317152
[2026-01-09 21:52:23] 2026-01-10 02:51:34,845 | INFO     | mean y: 2773023.9838187704
[2026-01-09 21:52:23] 2026-01-10 02:51:34,846 | INFO     | intersect: -9369618819.288446
[2026-01-09 21:52:23] 2026-01-10 02:51:34,847 | INFO     | chi2: 2.8441600780454426
[2026-01-09 21:52:23] 2026-01-10 02:51:34,847 | INFO     | current chi2=2.8441600780454426 (change=2.594736338834951 %)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,847 | INFO     | left removable region: 20
[2026-01-09 21:52:23] 2026-01-10 02:51:34,848 | INFO     | sum of square deviations: 65978161285.24968
[2026-01-09 21:52:23] 2026-01-10 02:51:34,860 | INFO     | sum of deviations: 537081416744.63135
[2026-01-09 21:52:23] 2026-01-10 02:51:34,861 | INFO     | mean x: 1767994618.832496
[2026-01-09 21:52:23] 2026-01-10 02:51:34,861 | INFO     | mean y: 2797196.596314908
[2026-01-09 21:52:23] 2026-01-10 02:51:34,861 | INFO     | intersect: -14389193064.758965
[2026-01-09 21:52:23] 2026-01-10 02:51:34,862 | INFO     | chi2: 0.044132492763706996
[2026-01-09 21:52:23] 2026-01-10 02:51:34,863 | INFO     | current memory leak: 8.14 B/s (using 597 data points, chi2=0.04)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,864 | INFO     | could have reported an average CPU frequency of 2602 MHz (24 samples)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,864 | INFO     | ..............................
[2026-01-09 21:52:23] 2026-01-10 02:51:34,864 | INFO     | . Timing measurements:
[2026-01-09 21:52:23] 2026-01-10 02:51:34,864 | INFO     | . get job = 0 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,865 | INFO     | . initial setup = 2 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,865 | INFO     | . payload setup = 5 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,865 | INFO     | . stage-in = 0 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,865 | INFO     | . payload execution = 38268 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,866 | INFO     | . stage-out = 3 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,866 | INFO     | . log creation = 0 s
[2026-01-09 21:52:23] 2026-01-10 02:51:34,866 | INFO     | ..............................
[2026-01-09 21:52:23] 2026-01-10 02:51:34,913 | INFO     | time since job start (38299s) is within the limit (349056.0s)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,958 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6963169969: 7733129 B (within 4404019200 B limit)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,959 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6963169969/HITS.47962010._000469.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,959 | INFO     | total size of present files: 0 B (workdir size: 7733129 B)
[2026-01-09 21:52:23] 2026-01-10 02:51:34,959 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6963169969/HITS.47962010._000469.pool.root.1 since it does not exist
[2026-01-09 21:52:23] 2026-01-10 02:51:35,090 | INFO     | number of running child processes to parent process 15737: 1
[2026-01-09 21:52:23] 2026-01-10 02:51:35,090 | INFO     | maximum number of monitored processes: 16
[2026-01-09 21:52:23] 2026-01-10 02:51:35,090 | INFO     | aborting job monitoring since job object (job id=6963169969) has expired
[2026-01-09 21:52:23] 2026-01-10 02:51:35,151 | INFO     | 
[2026-01-09 21:52:23] 2026-01-10 02:51:35,151 | INFO     | job summary report
[2026-01-09 21:52:23] 2026-01-10 02:51:35,151 | INFO     | --------------------------------------------------
[2026-01-09 21:52:23] 2026-01-10 02:51:35,151 | INFO     | PanDA job id: 6963169969
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | task id: 47962010
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | errors: (none)
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | pilot state: finished 
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | transexitcode: 0
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | exeerrorcode: 0
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | exeerrordiag: 
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | exitcode: 0
[2026-01-09 21:52:23] 2026-01-10 02:51:35,152 | INFO     | exitmsg: OK
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | cpuconsumptiontime: 297803 s
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | nevents: 450
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | neventsw: 0
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | pid: 15737
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | pgrp: 15737
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | corecount: 8
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | event service: False
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | sizes: {0: 2284620, 1: 2284620, 4: 2284910, 11: 2284938, 38278: 2327450, 38281: 2336628, 38285: 2336846}
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | --------------------------------------------------
[2026-01-09 21:52:23] 2026-01-10 02:51:35,153 | INFO     | 
[2026-01-09 21:52:23] 2026-01-10 02:51:35,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:52:23] 2026-01-10 02:51:35,171 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | job 6963169969 has completed (purged errors)
[2026-01-09 21:52:23] 2026-01-10 02:51:35,174 | INFO     | overall cleanup function is called
[2026-01-09 21:52:23] 2026-01-10 02:51:36,186 | INFO     | --- collectZombieJob: --- 10, [15737]
[2026-01-09 21:52:23] 2026-01-10 02:51:36,186 | INFO     | zombie collector waiting for pid 15737
[2026-01-09 21:52:23] 2026-01-10 02:51:36,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:52:23] 2026-01-10 02:51:36,187 | INFO     | collected zombie processes
[2026-01-09 21:52:23] 2026-01-10 02:51:36,187 | INFO     | will attempt to kill all subprocesses of pid=15737
[2026-01-09 21:52:23] 2026-01-10 02:51:36,352 | INFO     | process IDs to be killed: [15737] (in reverse order)
[2026-01-09 21:52:23] 2026-01-10 02:51:36,409 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:52:23] 2026-01-10 02:51:36,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:52:23] 2026-01-10 02:51:36,415 | INFO     | did not find any defunct processes belonging to 15737
[2026-01-09 21:52:23] 2026-01-10 02:51:36,419 | INFO     | did not find any defunct processes belonging to 15737
[2026-01-09 21:52:23] 2026-01-10 02:51:36,419 | INFO     | ready for new job
[2026-01-09 21:52:23] 2026-01-10 02:51:36,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:52:23] 2026-01-10 02:51:36,422 | INFO     | ***************************************
[2026-01-09 21:52:23] 2026-01-10 02:51:36,422 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:52:23] 2026-01-10 02:51:36,422 | INFO     | ***************************************
[2026-01-09 21:52:23] 2026-01-10 02:51:36,422 | INFO     | 
[2026-01-09 21:52:23] 2026-01-10 02:51:36,423 | INFO     | architecture information:
[2026-01-09 21:52:23] 2026-01-10 02:51:36,424 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:52:23] 2026-01-10 02:51:36,433 | INFO     | cat /etc/os-release:
[2026-01-09 21:52:23] NAME="CentOS Linux"
[2026-01-09 21:52:23] VERSION="7 (Core)"
[2026-01-09 21:52:23] ID="centos"
[2026-01-09 21:52:23] ID_LIKE="rhel fedora"
[2026-01-09 21:52:23] VERSION_ID="7"
[2026-01-09 21:52:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:52:23] ANSI_COLOR="0;31"
[2026-01-09 21:52:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:52:23] HOME_URL="https://www.centos.org/"
[2026-01-09 21:52:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:52:23] 
[2026-01-09 21:52:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:52:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:52:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:52:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:52:23] 
[2026-01-09 21:52:23] 2026-01-10 02:51:36,434 | INFO     | ***************************************
[2026-01-09 21:52:23] 2026-01-10 02:51:36,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:52:23] 2026-01-10 02:51:36,959 | INFO     | sufficient remaining disk space (27712815104 B)
[2026-01-09 21:52:23] 2026-01-10 02:51:36,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:52:23] 2026-01-10 02:51:36,960 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:52:23] 2026-01-10 02:51:36,960 | INFO     | update_server=False
[2026-01-09 21:52:23] 2026-01-10 02:51:36,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:52:23] 2026-01-10 02:51:36,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:52:23] 2026-01-10 02:51:36,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:52:23] 2026-01-10 02:51:36,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:52:23] 2026-01-10 02:51:36,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:52:23] 2026-01-10 02:51:36,962 | INFO     | aborting loop
[2026-01-09 21:52:23] 2026-01-10 02:51:37,530 | INFO     | all payload control threads have been joined
[2026-01-09 21:52:23] 2026-01-10 02:51:37,705 | INFO     | all data control threads have been joined
[2026-01-09 21:52:23] 2026-01-10 02:51:37,967 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:37,968 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:37,969 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,266 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,489 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,535 | INFO     | [payload] control thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,636 | INFO     | all job control threads have been joined
[2026-01-09 21:52:23] 2026-01-10 02:51:38,657 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,658 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,711 | INFO     | [data] control thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,729 | INFO     | [job] validate thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:38,967 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:39,086 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:39,147 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:39,291 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:39,641 | INFO     | [job] control thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:51:40,968 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:52:23] 2026-01-10 02:52:08,194 | INFO     | PID=9229 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 21:52:23] 2026-01-10 02:52:08,194 | INFO     | .. there are 3 such processes running
[2026-01-09 21:52:23] 2026-01-10 02:52:08,195 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:52:23] 2026-01-10 02:52:08,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:52:23] 2026-01-10 02:52:08,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:52:23] 2026-01-10 02:52:18,409 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:52:23] 2026-01-10 02:52:18,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458647713600)>', '<ExcThread(monitor, started 140458340624128)>']
[2026-01-09 21:52:23] 2026-01-10 02:52:19,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:52:23] 2026-01-10 02:52:19,250 | INFO     | [monitor] control thread has ended
[2026-01-09 21:52:23] 2026-01-10 02:52:23,449 | INFO     | all workflow threads have been joined
[2026-01-09 21:52:23] 2026-01-10 02:52:23,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:52:23] 2026-01-10 02:52:23,450 | INFO     | traces error code: 0
[2026-01-09 21:52:23] 2026-01-10 02:52:23,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:52:23] 2026-01-10 02:52:23,567 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:52:23] 2026-01-10 02:52:23,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:52:23] 2026-01-10 02:52:23,572 [wrapper] pilotpid: 9229
[2026-01-09 21:52:23] 2026-01-10 02:52:23,574 [wrapper] Pilot exit status: 0
[2026-01-09 21:52:23] 2026-01-10 02:52:23,589 [wrapper] pandaids: 6963169969
[2026-01-09 21:52:23] 2026-01-10 02:52:23,630 [wrapper] cleanup supervisor_pilot  5892 9230
[2026-01-09 21:52:23] 2026-01-10 02:52:23,633 [wrapper] Test setup, not cleaning
[2026-01-09 21:52:23] 2026-01-10 02:52:23,636 [wrapper] apfmon messages muted
[2026-01-09 21:52:23] 2026-01-10 02:52:23,638 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:52:23] 2026-01-10 02:52:23,640 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:52:23]  *** Error codes and diagnostics ***
[2026-01-09 21:52:23]     "exeErrorCode": 0,
[2026-01-09 21:52:23]     "exeErrorDiag": "",
[2026-01-09 21:52:23]     "pilotErrorCode": 0,
[2026-01-09 21:52:23]     "pilotErrorDiag": "",
[2026-01-09 21:52:23]  *** Listing of results directory ***
[2026-01-09 21:52:23] total 783080
[2026-01-09 21:52:23] -rwx------ 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas       100 Jan  9 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:52:23] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 11:13 run_atlas
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas       105 Jan  9 11:13 job.xml
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas 389443902 Jan  9 11:13 EVNT.47962006._000051.pool.root.1
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 11:13 start_atlas.sh
[2026-01-09 21:52:23] drwxrwx--x 2 boincer umatlas      4096 Jan  9 11:13 shared
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas    592612 Jan  9 11:13 input.tar.gz
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas         0 Jan  9 11:13 boinc_lockfile
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas      2891 Jan  9 11:13 pandaJob.out
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas        57 Jan  9 11:13 setup.sh.local
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas    989377 Jan  9 11:13 agis_schedconf.cvmfs.json
[2026-01-09 21:52:23] drwx------ 5 boincer umatlas      4096 Jan  9 11:13 pilot3
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas       533 Jan  9 21:40 boinc_task_state.xml
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 21:49 init_data.xml
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas 394285942 Jan  9 21:51 HITS.47962010._000469.pool.root.1
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas      1063 Jan  9 21:51 memory_monitor_summary.json
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas   1516240 Jan  9 21:51 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas   1772223 Jan  9 21:51 log.47962010._000469.job.log.tgz.1
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas      8655 Jan  9 21:51 heartbeat.json
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 21:52 boinc_mmap_file
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas        29 Jan  9 21:52 wrapper_checkpoint.txt
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas        95 Jan  9 21:52 pilot_heartbeat.json
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas      4820 Jan  9 21:52 pilotlog.txt
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas   5340024 Jan  9 21:52 log.47962010._000469.job.log.1
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas       353 Jan  9 21:52 output.list
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas       620 Jan  9 21:52 runtime_log
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas   7127040 Jan  9 21:52 result.tar.gz
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 21:52 runtime_log.err
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas       667 Jan  9 21:52 gjMMDm3uLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNZmKDm85qBhn.diag
[2026-01-09 21:52:23] -rw-r--r-- 1 boincer umatlas     21417 Jan  9 21:52 stderr.txt
[2026-01-09 21:52:23] HITS file was successfully produced:
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas 394285942 Jan  9 21:51 shared/HITS.pool.root.1
[2026-01-09 21:52:23]  *** Contents of shared directory: ***
[2026-01-09 21:52:23] total 772932
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas 389443902 Jan  9 11:13 ATLAS.root_0
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 11:13 start_atlas.sh
[2026-01-09 21:52:23] -rw-r--r-- 2 boincer umatlas    592612 Jan  9 11:13 input.tar.gz
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas 394285942 Jan  9 21:51 HITS.pool.root.1
[2026-01-09 21:52:23] -rw------- 1 boincer umatlas   7127040 Jan  9 21:52 result.tar.gz
21:52:25 (5545): run_atlas exited; CPU time 297362.177762
21:52:25 (5545): called boinc_finish(0)

</stderr_txt>
]]>

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