Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:16:17 (1156458): wrapper (7.7.26015): starting
11:16:17 (1156458): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 11:16:17] Arguments: --nthreads 9
[2026-01-09 11:16:17] Threads: 9
[2026-01-09 11:16:17] Checking for CVMFS
[2026-01-09 11:16:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:16:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:16:18] 2.13.3.0 7268 23111 214432 154948 0 426 40410287 40960001 22679 16776704 0 55849290 99.658 52915398 39181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:16:18] CVMFS is ok
[2026-01-09 11:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:16:18] Further information can be found at the LHC@home message board.
[2026-01-09 11:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:16:18] Checking for apptainer binary...
[2026-01-09 11:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:16:18] Running /usr/bin/apptainer --version
[2026-01-09 11:16:18] apptainer version 1.4.5-2.el9
[2026-01-09 11:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:16:18] c-212-18.aglt2.org
[2026-01-09 11:16:18] apptainer works
[2026-01-09 11:16:18] Set ATHENA_PROC_NUMBER=9
[2026-01-09 11:16:18] Set ATHENA_CORE_NUMBER=9
[2026-01-09 11:16:18] Starting ATLAS job with PandaID=6963195839
[2026-01-09 11:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:19:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:19:44] 2026-01-10 00:18:53,028 | INFO     | total number of processed events: 450 (read)
[2026-01-09 19:19:44] 2026-01-10 00:18:53,030 | INFO     | executing command: lscpu
[2026-01-09 19:19:44] 2026-01-10 00:18:53,221 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:19:44] 2026-01-10 00:18:53,770 | INFO     | time since job start (28924s) is within the limit (349056.0s)
[2026-01-09 19:19:44] 2026-01-10 00:18:54,458 | INFO     | monitor loop #2013: job 0:6963195839 is in state 'finished'
[2026-01-09 19:19:44] 2026-01-10 00:18:54,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:19:44] 2026-01-10 00:18:55,779 | INFO     | time since job start (28926s) is within the limit (349056.0s)
[2026-01-09 19:19:44] 2026-01-10 00:18:56,963 | INFO     | monitor loop #2014: job 0:6963195839 is in state 'finished'
[2026-01-09 19:19:44] 2026-01-10 00:18:56,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:19:44] 2026-01-10 00:18:57,785 | INFO     | time since job start (28928s) is within the limit (349056.0s)
[2026-01-09 19:19:44] 2026-01-10 00:18:59,468 | INFO     | monitor loop #2015: job 0:6963195839 is in state 'finished'
[2026-01-09 19:19:44] 2026-01-10 00:18:59,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:19:44] 2026-01-10 00:18:59,802 | INFO     | time since job start (28930s) is within the limit (349056.0s)
[2026-01-09 19:19:44] 2026-01-10 00:19:01,559 | INFO     | PID=1169508 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 19:19:44] 2026-01-10 00:19:01,559 | INFO     | .. there are 25 such processes running
[2026-01-09 19:19:44] 2026-01-10 00:19:01,974 | INFO     | monitor loop #2016: job 0:6963195839 is in state 'finished'
[2026-01-09 19:19:44] 2026-01-10 00:19:01,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:19:44] 2026-01-10 00:19:02,562 | INFO     | time since job start (28933s) is within the limit (349056.0s)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,278 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:19:44] 2026-01-10 00:19:03,292 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3411.225260416666
[2026-01-09 19:19:44] 2026-01-10 00:19:03,306 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963195839/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,307 | INFO     | extracted standard info from prmon json
[2026-01-09 19:19:44] 2026-01-10 00:19:03,307 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:19:44] 2026-01-10 00:19:03,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:19:44] 2026-01-10 00:19:03,314 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:19:44] 2026-01-10 00:19:03,315 | INFO     | sum of square deviations: 33023052865.01266
[2026-01-09 19:19:44] 2026-01-10 00:19:03,319 | INFO     | sum of deviations: -265463267680.53174
[2026-01-09 19:19:44] 2026-01-10 00:19:03,319 | INFO     | mean x: 1767989892.607595
[2026-01-09 19:19:44] 2026-01-10 00:19:03,319 | INFO     | mean y: 2779446.981012658
[2026-01-09 19:19:44] 2026-01-10 00:19:03,319 | INFO     | intersect: 14215165444.007294
[2026-01-09 19:19:44] 2026-01-10 00:19:03,320 | INFO     | chi2: 13.170484131446281
[2026-01-09 19:19:44] 2026-01-10 00:19:03,320 | INFO     | sum of square deviations: 31989146322.550034
[2026-01-09 19:19:44] 2026-01-10 00:19:03,325 | INFO     | sum of deviations: -132505993817.85495
[2026-01-09 19:19:44] 2026-01-10 00:19:03,325 | INFO     | mean x: 1767989740.1172707
[2026-01-09 19:19:44] 2026-01-10 00:19:03,325 | INFO     | mean y: 2799023.488272921
[2026-01-09 19:19:44] 2026-01-10 00:19:03,325 | INFO     | intersect: 7326196628.783766
[2026-01-09 19:19:44] 2026-01-10 00:19:03,326 | INFO     | chi2: 10.541009060552655
[2026-01-09 19:19:44] 2026-01-10 00:19:03,326 | INFO     | current chi2=10.541009060552655 (change=19.964908234583458 %)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,326 | INFO     | right removable region: 468
[2026-01-09 19:19:44] 2026-01-10 00:19:03,326 | INFO     | sum of square deviations: 31988854741.31347
[2026-01-09 19:19:44] 2026-01-10 00:19:03,331 | INFO     | sum of deviations: -422657300019.5972
[2026-01-09 19:19:44] 2026-01-10 00:19:03,331 | INFO     | mean x: 1767990045.119403
[2026-01-09 19:19:44] 2026-01-10 00:19:03,331 | INFO     | mean y: 2802602.1535181236
[2026-01-09 19:19:44] 2026-01-10 00:19:03,331 | INFO     | intersect: 23362622920.028717
[2026-01-09 19:19:44] 2026-01-10 00:19:03,332 | INFO     | chi2: 9.930146627259319
[2026-01-09 19:19:44] 2026-01-10 00:19:03,332 | INFO     | current chi2=9.930146627259319 (change=24.603025005361996 %)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,332 | INFO     | left removable region: 10
[2026-01-09 19:19:44] 2026-01-10 00:19:03,332 | INFO     | sum of square deviations: 29790547012.1069
[2026-01-09 19:19:44] 2026-01-10 00:19:03,337 | INFO     | sum of deviations: -301375912686.67255
[2026-01-09 19:19:44] 2026-01-10 00:19:03,337 | INFO     | mean x: 1767990014.6353712
[2026-01-09 19:19:44] 2026-01-10 00:19:03,337 | INFO     | mean y: 2829284.7205240177
[2026-01-09 19:19:44] 2026-01-10 00:19:03,337 | INFO     | intersect: 17888691000.01955
[2026-01-09 19:19:44] 2026-01-10 00:19:03,338 | INFO     | chi2: 6.988005158584919
[2026-01-09 19:19:44] 2026-01-10 00:19:03,338 | INFO     | current memory leak: -10.12 B/s (using 458 data points, chi2=6.99)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | could have reported an average CPU frequency of 3309 MHz (19 samples)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | ..............................
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . Timing measurements:
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . get job = 0 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . initial setup = 2 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . payload setup = 13 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . stage-in = 0 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,339 | INFO     | . payload execution = 28867 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,340 | INFO     | . stage-out = 2 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,340 | INFO     | . log creation = 0 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,340 | INFO     | ..............................
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | 
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | job summary report
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | --------------------------------------------------
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | PanDA job id: 6963195839
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | task id: 47962010
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | errors: (none)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | pilot state: finished 
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | transexitcode: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | exeerrorcode: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | exeerrordiag: 
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | exitcode: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:03,411 | INFO     | exitmsg: OK
[2026-01-09 19:19:44] 2026-01-10 00:19:03,412 | INFO     | cpuconsumptiontime: 104405 s
[2026-01-09 19:19:44] 2026-01-10 00:19:03,412 | INFO     | nevents: 450
[2026-01-09 19:19:44] 2026-01-10 00:19:03,412 | INFO     | neventsw: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:03,412 | INFO     | pid: 1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | pgrp: 1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | corecount: 9
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | event service: False
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | sizes: {0: 2284449, 1: 2284648, 11: 2284648, 13: 2284938, 22: 2284994, 28884: 2323596, 28887: 2332590, 28889: 2332646, 28902: 2332892}
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | --------------------------------------------------
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | 
[2026-01-09 19:19:44] 2026-01-10 00:19:03,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 19:19:44] 2026-01-10 00:19:03,435 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,435 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,435 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,435 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,436 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:19:44] 2026-01-10 00:19:03,437 | INFO     | job 6963195839 has completed (purged errors)
[2026-01-09 19:19:44] 2026-01-10 00:19:03,437 | INFO     | overall cleanup function is called
[2026-01-09 19:19:44] 2026-01-10 00:19:04,494 | INFO     | --- collectZombieJob: --- 10, [1184850]
[2026-01-09 19:19:44] 2026-01-10 00:19:04,494 | INFO     | zombie collector waiting for pid 1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:04,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:19:44] 2026-01-10 00:19:04,494 | INFO     | collected zombie processes
[2026-01-09 19:19:44] 2026-01-10 00:19:04,494 | INFO     | will attempt to kill all subprocesses of pid=1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:04,952 | INFO     | process IDs to be killed: [1184850] (in reverse order)
[2026-01-09 19:19:44] 2026-01-10 00:19:05,176 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:19:44] 2026-01-10 00:19:05,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:19:44] 2026-01-10 00:19:05,195 | INFO     | did not find any defunct processes belonging to 1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:05,212 | INFO     | did not find any defunct processes belonging to 1184850
[2026-01-09 19:19:44] 2026-01-10 00:19:05,212 | INFO     | ready for new job
[2026-01-09 19:19:44] 2026-01-10 00:19:05,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:19:44] 2026-01-10 00:19:05,215 | INFO     | ***************************************
[2026-01-09 19:19:44] 2026-01-10 00:19:05,215 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:19:44] 2026-01-10 00:19:05,215 | INFO     | ***************************************
[2026-01-09 19:19:44] 2026-01-10 00:19:05,215 | INFO     | 
[2026-01-09 19:19:44] 2026-01-10 00:19:05,219 | INFO     | architecture information:
[2026-01-09 19:19:44] 2026-01-10 00:19:05,219 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:19:44] 2026-01-10 00:19:05,244 | INFO     | cat /etc/os-release:
[2026-01-09 19:19:44] NAME="CentOS Linux"
[2026-01-09 19:19:44] VERSION="7 (Core)"
[2026-01-09 19:19:44] ID="centos"
[2026-01-09 19:19:44] ID_LIKE="rhel fedora"
[2026-01-09 19:19:44] VERSION_ID="7"
[2026-01-09 19:19:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:19:44] ANSI_COLOR="0;31"
[2026-01-09 19:19:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:19:44] HOME_URL="https://www.centos.org/"
[2026-01-09 19:19:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:19:44] 
[2026-01-09 19:19:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:19:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:19:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:19:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:19:44] 
[2026-01-09 19:19:44] 2026-01-10 00:19:05,245 | INFO     | ***************************************
[2026-01-09 19:19:44] 2026-01-10 00:19:05,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 19:19:44] 2026-01-10 00:19:05,764 | INFO     | sufficient remaining disk space (125293297664 B)
[2026-01-09 19:19:44] 2026-01-10 00:19:05,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:19:44] 2026-01-10 00:19:05,765 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:19:44] 2026-01-10 00:19:05,765 | INFO     | update_server=False
[2026-01-09 19:19:44] 2026-01-10 00:19:05,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:19:44] 2026-01-10 00:19:05,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:19:44] 2026-01-10 00:19:05,766 | INFO     | aborting loop
[2026-01-09 19:19:44] 2026-01-10 00:19:05,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:19:44] 2026-01-10 00:19:06,222 | INFO     | all job control threads have been joined
[2026-01-09 19:19:44] 2026-01-10 00:19:06,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:19:44] 2026-01-10 00:19:06,524 | INFO     | all data control threads have been joined
[2026-01-09 19:19:44] 2026-01-10 00:19:06,770 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:06,771 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:06,839 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:06,930 | INFO     | [job] validate thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:06,965 | INFO     | all payload control threads have been joined
[2026-01-09 19:19:44] 2026-01-10 00:19:07,228 | INFO     | [job] control thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:07,251 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:07,529 | INFO     | [data] control thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:07,585 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:07,714 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:07,971 | INFO     | [payload] control thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:08,058 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:08,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:08,243 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:08,383 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:08,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:19:44] 2026-01-10 00:19:09,432 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:09,871 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:19:44] 2026-01-10 00:19:36,330 | INFO     | PID=1169508 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:19:44] 2026-01-10 00:19:36,330 | INFO     | .. there are 25 such processes running
[2026-01-09 19:19:44] 2026-01-10 00:19:36,330 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:19:44] 2026-01-10 00:19:36,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:19:44] 2026-01-10 00:19:36,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:19:44] 2026-01-10 00:19:38,699 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:19:44] 2026-01-10 00:19:38,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876374275904)>', '<ExcThread(monitor, started 139876003473152)>']
[2026-01-09 19:19:44] 2026-01-10 00:19:39,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:19:44] 2026-01-10 00:19:39,348 | INFO     | [monitor] control thread has ended
[2026-01-09 19:19:44] 2026-01-10 00:19:43,989 | INFO     | all workflow threads have been joined
[2026-01-09 19:19:44] 2026-01-10 00:19:43,989 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:19:44] 2026-01-10 00:19:43,990 | INFO     | traces error code: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:43,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:19:44] 2026-01-10 00:19:44,132 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:19:44] 2026-01-10 00:19:44,135 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:19:44] 2026-01-10 00:19:44,139 [wrapper] pilotpid: 1169508
[2026-01-09 19:19:44] 2026-01-10 00:19:44,141 [wrapper] Pilot exit status: 0
[2026-01-09 19:19:44] 2026-01-10 00:19:44,195 [wrapper] pandaids: 6963195839
[2026-01-09 19:19:44] 2026-01-10 00:19:44,314 [wrapper] cleanup supervisor_pilot 3197808 1169509
[2026-01-09 19:19:44] 2026-01-10 00:19:44,325 [wrapper] Test setup, not cleaning
[2026-01-09 19:19:44] 2026-01-10 00:19:44,346 [wrapper] apfmon messages muted
[2026-01-09 19:19:44] 2026-01-10 00:19:44,355 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:19:44] 2026-01-10 00:19:44,357 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:19:44]  *** Error codes and diagnostics ***
[2026-01-09 19:19:44]     "exeErrorCode": 0,
[2026-01-09 19:19:44]     "exeErrorDiag": "",
[2026-01-09 19:19:44]     "pilotErrorCode": 0,
[2026-01-09 19:19:44]     "pilotErrorDiag": "",
[2026-01-09 19:19:44]  *** Listing of results directory ***
[2026-01-09 19:19:44] total 793832
[2026-01-09 19:19:44] -rwx------. 1 boincer umatlas     36322 Jan  9 02:17 runpilot2-wrapper.sh
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:19:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:16 run_atlas
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:16 job.xml
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas 393484406 Jan  9 11:16 EVNT.47962006._000060.pool.root.1
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:16 start_atlas.sh
[2026-01-09 19:19:44] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:16 shared
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas    592616 Jan  9 11:16 input.tar.gz
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:16 boinc_lockfile
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 11:16 pandaJob.out
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas        57 Jan  9 11:16 setup.sh.local
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas    989356 Jan  9 11:16 agis_schedconf.cvmfs.json
[2026-01-09 19:19:44] drwx------. 5 boincer umatlas      4096 Jan  9 11:16 pilot3
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas       533 Jan  9 18:30 boinc_task_state.xml
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas      6959 Jan  9 19:09 init_data.xml
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas 404001284 Jan  9 19:18 HITS.47962010._000670.pool.root.1
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas      1052 Jan  9 19:18 memory_monitor_summary.json
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas   1737389 Jan  9 19:18 log.47962010._000670.job.log.tgz.1
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas        95 Jan  9 19:19 pilot_heartbeat.json
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas      8585 Jan  9 19:19 heartbeat.json
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:19 boinc_mmap_file
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas        29 Jan  9 19:19 wrapper_checkpoint.txt
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas      4825 Jan  9 19:19 pilotlog.txt
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas   4001725 Jan  9 19:19 log.47962010._000670.job.log.1
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas       353 Jan  9 19:19 output.list
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:19 runtime_log
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas   5754880 Jan  9 19:19 result.tar.gz
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas       662 Jan  9 19:19 S5uNDmEvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNOhKDmjbKVEm.diag
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 19:19 runtime_log.err
[2026-01-09 19:19:44] -rw-r--r--. 1 boincer umatlas     21795 Jan  9 19:19 stderr.txt
[2026-01-09 19:19:44] HITS file was successfully produced:
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas 404001284 Jan  9 19:18 shared/HITS.pool.root.1
[2026-01-09 19:19:44]  *** Contents of shared directory: ***
[2026-01-09 19:19:44] total 785024
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas 393484406 Jan  9 11:16 ATLAS.root_0
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:16 start_atlas.sh
[2026-01-09 19:19:44] -rw-r--r--. 2 boincer umatlas    592616 Jan  9 11:16 input.tar.gz
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas 404001284 Jan  9 19:18 HITS.pool.root.1
[2026-01-09 19:19:44] -rw-------. 1 boincer umatlas   5754880 Jan  9 19:19 result.tar.gz
19:19:46 (1156458): run_atlas exited; CPU time 104590.775598
19:19:46 (1156458): called boinc_finish(0)

</stderr_txt>
]]>

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