Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:11 (3180176): wrapper (7.7.26015): starting
11:38:11 (3180176): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:38:11] Arguments: --nthreads 8
[2026-01-09 11:38:11] Threads: 8
[2026-01-09 11:38:11] Checking for CVMFS
[2026-01-09 11:38:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:38:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:38:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:38:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:38:12] 2.13.3.0 3884235 17188 172012 154950 3 305 39322481 40960000 13992 16776704 0 19193934 99.539 23796869 43951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:38:12] CVMFS is ok
[2026-01-09 11:38:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:38:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:38:12] Further information can be found at the LHC@home message board.
[2026-01-09 11:38:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:38:12] Checking for apptainer binary...
[2026-01-09 11:38:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:38:12] Running /usr/bin/apptainer --version
[2026-01-09 11:38:12] apptainer version 1.4.5-2.el9
[2026-01-09 11:38:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:38:13] c-206-35.aglt2.org
[2026-01-09 11:38:13] apptainer works
[2026-01-09 11:38:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:38:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:38:14] Starting ATLAS job with PandaID=6963169946
[2026-01-09 11:38:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:40:05 (3180176): BOINC client no longer exists - exiting
01:40:05 (3180176): timer handler: client dead, exiting
01:40:13 (475730): wrapper (7.7.26015): starting
01:40:13 (475730): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 01:40:13] Arguments: --nthreads 8
[2026-01-10 01:40:13] Threads: 8
[2026-01-10 01:40:13] This job has been restarted, cleaning up previous attempt
[2026-01-10 01:40:14] Checking for CVMFS
[2026-01-10 01:40:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:40:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:40:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:40:14] 2.13.3.0 3884235 18030 164872 154970 3 136 40646732 40960001 12054 16776704 0 20363701 99.562 23877638 43933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 01:40:14] CVMFS is ok
[2026-01-10 01:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:40:14] Further information can be found at the LHC@home message board.
[2026-01-10 01:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:40:14] Checking for apptainer binary...
[2026-01-10 01:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:40:14] Running /usr/bin/apptainer --version
[2026-01-10 01:40:15] apptainer version 1.4.5-2.el9
[2026-01-10 01:40:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:40:15] c-206-35.aglt2.org
[2026-01-10 01:40:15] apptainer works
[2026-01-10 01:40:15] Set ATHENA_PROC_NUMBER=8
[2026-01-10 01:40:15] Set ATHENA_CORE_NUMBER=8
[2026-01-10 01:40:15] Starting ATLAS job with PandaID=6963169946
[2026-01-10 01:40:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:48:53]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:48:53] 2026-01-10 19:48:05,386 | INFO     | monitor loop #3085: job 0:6963169946 is in state 'finished'
[2026-01-10 14:48:53] 2026-01-10 19:48:05,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:48:53] 2026-01-10 19:48:06,164 | INFO     | time since job start (47259s) is within the limit (349056.0s)
[2026-01-10 14:48:53] 2026-01-10 19:48:06,929 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 14:48:53] 2026-01-10 19:48:06,934 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3241.39434375
[2026-01-10 14:48:53] 2026-01-10 19:48:06,944 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963169946/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:48:53] 2026-01-10 19:48:06,945 | INFO     | extracted standard info from prmon json
[2026-01-10 14:48:53] 2026-01-10 19:48:06,945 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:48:53] 2026-01-10 19:48:06,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:48:53] 2026-01-10 19:48:06,955 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:48:53] 2026-01-10 19:48:06,956 | INFO     | sum of square deviations: 144342383310.8569
[2026-01-10 14:48:53] 2026-01-10 19:48:06,968 | INFO     | sum of deviations: 1019061935265.8463
[2026-01-10 14:48:53] 2026-01-10 19:48:06,968 | INFO     | mean x: 1768050870.1690323
[2026-01-10 14:48:53] 2026-01-10 19:48:06,968 | INFO     | mean y: 2793599.901935484
[2026-01-10 14:48:53] 2026-01-10 19:48:06,968 | INFO     | intersect: -12479703225.182678
[2026-01-10 14:48:53] 2026-01-10 19:48:06,969 | INFO     | chi2: 4.152208647010764
[2026-01-10 14:48:53] 2026-01-10 19:48:06,970 | INFO     | sum of square deviations: 141567225344.6808
[2026-01-10 14:48:53] 2026-01-10 19:48:06,981 | INFO     | sum of deviations: 1188764499764.9282
[2026-01-10 14:48:53] 2026-01-10 19:48:06,981 | INFO     | mean x: 1768050717.683117
[2026-01-10 14:48:53] 2026-01-10 19:48:06,982 | INFO     | mean y: 2802907.479220779
[2026-01-10 14:48:53] 2026-01-10 19:48:06,982 | INFO     | intersect: -14843825059.186407
[2026-01-10 14:48:53] 2026-01-10 19:48:06,982 | INFO     | chi2: 2.3468314768167877
[2026-01-10 14:48:53] 2026-01-10 19:48:06,982 | INFO     | current chi2=2.3468314768167877 (change=43.479924148168564 %)
[2026-01-10 14:48:53] 2026-01-10 19:48:06,983 | INFO     | sum of square deviations: 138827506262.26907
[2026-01-10 14:48:53] 2026-01-10 19:48:06,995 | INFO     | sum of deviations: 1176534413432.8728
[2026-01-10 14:48:53] 2026-01-10 19:48:06,995 | INFO     | mean x: 1768050565.186928
[2026-01-10 14:48:53] 2026-01-10 19:48:06,995 | INFO     | mean y: 2802224.5673202616
[2026-01-10 14:48:53] 2026-01-10 19:48:06,995 | INFO     | intersect: -14981060776.631142
[2026-01-10 14:48:53] 2026-01-10 19:48:06,996 | INFO     | chi2: 2.3343714024057425
[2026-01-10 14:48:53] 2026-01-10 19:48:06,996 | INFO     | current chi2=2.3343714024057425 (change=0.5309317918279299 %)
[2026-01-10 14:48:53] 2026-01-10 19:48:06,996 | INFO     | right removable region: 764
[2026-01-10 14:48:53] 2026-01-10 19:48:06,997 | INFO     | sum of square deviations: 141566246969.04532
[2026-01-10 14:48:53] 2026-01-10 19:48:07,008 | INFO     | sum of deviations: 817003916861.0444
[2026-01-10 14:48:53] 2026-01-10 19:48:07,009 | INFO     | mean x: 1768051022.6818182
[2026-01-10 14:48:53] 2026-01-10 19:48:07,009 | INFO     | mean y: 2804682.6246753247
[2026-01-10 14:48:53] 2026-01-10 19:48:07,009 | INFO     | intersect: -10200931318.493404
[2026-01-10 14:48:53] 2026-01-10 19:48:07,010 | INFO     | chi2: 1.9877496824249241
[2026-01-10 14:48:53] 2026-01-10 19:48:07,010 | INFO     | current chi2=1.9877496824249241 (change=52.127895021462024 %)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,010 | INFO     | sum of square deviations: 138826583441.1765
[2026-01-10 14:48:53] 2026-01-10 19:48:07,022 | INFO     | sum of deviations: 766515181512.1173
[2026-01-10 14:48:53] 2026-01-10 19:48:07,023 | INFO     | mean x: 1768051175.1764705
[2026-01-10 14:48:53] 2026-01-10 19:48:07,023 | INFO     | mean y: 2807492.650980392
[2026-01-10 14:48:53] 2026-01-10 19:48:07,023 | INFO     | intersect: -9759285860.581652
[2026-01-10 14:48:53] 2026-01-10 19:48:07,024 | INFO     | chi2: 1.9299801828967653
[2026-01-10 14:48:53] 2026-01-10 19:48:07,024 | INFO     | current chi2=1.9299801828967653 (change=2.906276380720323 %)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,024 | INFO     | left removable region: 20
[2026-01-10 14:48:53] 2026-01-10 19:48:07,024 | INFO     | sum of square deviations: 127705879133.27768
[2026-01-10 14:48:53] 2026-01-10 19:48:07,035 | INFO     | sum of deviations: 842549871415.1165
[2026-01-10 14:48:53] 2026-01-10 19:48:07,035 | INFO     | mean x: 1768051144.689516
[2026-01-10 14:48:53] 2026-01-10 19:48:07,035 | INFO     | mean y: 2820837.4637096776
[2026-01-10 14:48:53] 2026-01-10 19:48:07,035 | INFO     | intersect: -11662039658.573717
[2026-01-10 14:48:53] 2026-01-10 19:48:07,036 | INFO     | chi2: 0.04330019596985028
[2026-01-10 14:48:53] 2026-01-10 19:48:07,036 | INFO     | current memory leak: 6.60 B/s (using 744 data points, chi2=0.04)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | could have reported an average CPU frequency of 3256 MHz (29 samples)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | ..............................
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . Timing measurements:
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . get job = 0 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . initial setup = 2 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . payload setup = 7 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . stage-in = 0 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . payload execution = 47224 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . stage-out = 2 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,037 | INFO     | . log creation = 0 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,038 | INFO     | ..............................
[2026-01-10 14:48:53] 2026-01-10 19:48:07,118 | INFO     | 
[2026-01-10 14:48:53] 2026-01-10 19:48:07,119 | INFO     | job summary report
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | --------------------------------------------------
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | PanDA job id: 6963169946
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | task id: 47962010
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | errors: (none)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | pilot state: finished 
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | transexitcode: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | exeerrorcode: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | exeerrordiag: 
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | exitcode: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | exitmsg: OK
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | cpuconsumptiontime: 105201 s
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | nevents: 450
[2026-01-10 14:48:53] 2026-01-10 19:48:07,120 | INFO     | neventsw: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | pid: 506250
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | pgrp: 506250
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | corecount: 8
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | event service: False
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | sizes: {0: 2284620, 6: 2284882, 11: 2284910, 47235: 2332982, 47238: 2342032, 47243: 2342222}
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | --------------------------------------------------
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | 
[2026-01-10 14:48:53] 2026-01-10 19:48:07,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 14:48:53] 2026-01-10 19:48:07,146 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,148 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,148 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:48:53] 2026-01-10 19:48:07,148 | INFO     | job 6963169946 has completed (purged errors)
[2026-01-10 14:48:53] 2026-01-10 19:48:07,148 | INFO     | overall cleanup function is called
[2026-01-10 14:48:53] 2026-01-10 19:48:08,164 | INFO     | --- collectZombieJob: --- 10, [506250]
[2026-01-10 14:48:53] 2026-01-10 19:48:08,164 | INFO     | zombie collector waiting for pid 506250
[2026-01-10 14:48:53] 2026-01-10 19:48:08,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:48:53] 2026-01-10 19:48:08,165 | INFO     | collected zombie processes
[2026-01-10 14:48:53] 2026-01-10 19:48:08,165 | INFO     | will attempt to kill all subprocesses of pid=506250
[2026-01-10 14:48:53] 2026-01-10 19:48:08,427 | INFO     | process IDs to be killed: [506250] (in reverse order)
[2026-01-10 14:48:53] 2026-01-10 19:48:08,526 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:48:53] 2026-01-10 19:48:08,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:48:53] 2026-01-10 19:48:08,538 | INFO     | did not find any defunct processes belonging to 506250
[2026-01-10 14:48:53] 2026-01-10 19:48:08,550 | INFO     | did not find any defunct processes belonging to 506250
[2026-01-10 14:48:53] 2026-01-10 19:48:08,550 | INFO     | ready for new job
[2026-01-10 14:48:53] 2026-01-10 19:48:08,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:48:53] 2026-01-10 19:48:08,554 | INFO     | ***************************************
[2026-01-10 14:48:53] 2026-01-10 19:48:08,554 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:48:53] 2026-01-10 19:48:08,554 | INFO     | ***************************************
[2026-01-10 14:48:53] 2026-01-10 19:48:08,554 | INFO     | 
[2026-01-10 14:48:53] 2026-01-10 19:48:08,558 | INFO     | architecture information:
[2026-01-10 14:48:53] 2026-01-10 19:48:08,559 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:48:53] 2026-01-10 19:48:08,577 | INFO     | cat /etc/os-release:
[2026-01-10 14:48:53] NAME="CentOS Linux"
[2026-01-10 14:48:53] VERSION="7 (Core)"
[2026-01-10 14:48:53] ID="centos"
[2026-01-10 14:48:53] ID_LIKE="rhel fedora"
[2026-01-10 14:48:53] VERSION_ID="7"
[2026-01-10 14:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:48:53] ANSI_COLOR="0;31"
[2026-01-10 14:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:48:53] HOME_URL="https://www.centos.org/"
[2026-01-10 14:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:48:53] 
[2026-01-10 14:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:48:53] 
[2026-01-10 14:48:53] 2026-01-10 19:48:08,577 | INFO     | ***************************************
[2026-01-10 14:48:53] 2026-01-10 19:48:09,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | INFO     | sufficient remaining disk space (85909831680 B)
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | INFO     | update_server=False
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:48:53] 2026-01-10 19:48:09,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:48:53] 2026-01-10 19:48:09,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:48:53] 2026-01-10 19:48:09,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:48:53] 2026-01-10 19:48:09,099 | INFO     | aborting loop
[2026-01-10 14:48:53] 2026-01-10 19:48:09,633 | INFO     | all payload control threads have been joined
[2026-01-10 14:48:53] 2026-01-10 19:48:09,911 | INFO     | all data control threads have been joined
[2026-01-10 14:48:53] 2026-01-10 19:48:10,103 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,105 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,107 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:48:53] 2026-01-10 19:48:10,272 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,421 | INFO     | all job control threads have been joined
[2026-01-10 14:48:53] 2026-01-10 19:48:10,506 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,516 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,639 | INFO     | [payload] control thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,704 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,911 | INFO     | [job] validate thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:10,914 | INFO     | [data] control thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:11,181 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:11,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:11,427 | INFO     | [job] control thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:12,267 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:13,109 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:19,690 | INFO     | job.realtimelogging is not enabled
[2026-01-10 14:48:53] 2026-01-10 19:48:20,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:48:53] 2026-01-10 19:48:39,556 | INFO     | PID=487236 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 14:48:53] 2026-01-10 19:48:39,556 | INFO     | .. there are 9 such processes running
[2026-01-10 14:48:53] 2026-01-10 19:48:39,556 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:48:53] 2026-01-10 19:48:39,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:48:53] 2026-01-10 19:48:39,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:48:53] 2026-01-10 19:48:47,859 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:48:53] 2026-01-10 19:48:48,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651939579712)>', '<ExcThread(monitor, started 139651574646528)>']
[2026-01-10 14:48:53] 2026-01-10 19:48:48,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:48:53] 2026-01-10 19:48:48,594 | INFO     | [monitor] control thread has ended
[2026-01-10 14:48:53] 2026-01-10 19:48:53,122 | INFO     | all workflow threads have been joined
[2026-01-10 14:48:53] 2026-01-10 19:48:53,122 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:48:53] 2026-01-10 19:48:53,123 | INFO     | traces error code: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:53,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:48:53] 2026-01-10 19:48:53,246 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:48:53] 2026-01-10 19:48:53,249 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:48:53] 2026-01-10 19:48:53,251 [wrapper] pilotpid: 487236
[2026-01-10 14:48:53] 2026-01-10 19:48:53,256 [wrapper] Pilot exit status: 0
[2026-01-10 14:48:53] 2026-01-10 19:48:53,267 [wrapper] pandaids: 6963169946 6963169946
[2026-01-10 14:48:53] 2026-01-10 19:48:53,340 [wrapper] cleanup supervisor_pilot 1778869 487237
[2026-01-10 14:48:53] 2026-01-10 19:48:53,343 [wrapper] Test setup, not cleaning
[2026-01-10 14:48:53] 2026-01-10 19:48:53,346 [wrapper] apfmon messages muted
[2026-01-10 14:48:53] 2026-01-10 19:48:53,350 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:48:53] 2026-01-10 19:48:53,353 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:48:53]  *** Error codes and diagnostics ***
[2026-01-10 14:48:53]     "exeErrorCode": 0,
[2026-01-10 14:48:53]     "exeErrorDiag": "",
[2026-01-10 14:48:53]     "pilotErrorCode": 0,
[2026-01-10 14:48:53]     "pilotErrorDiag": "",
[2026-01-10 14:48:53]  *** Listing of results directory ***
[2026-01-10 14:48:53] total 1176192
[2026-01-10 14:48:53] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 14:48:53] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:48:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:38 run_atlas
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:38 job.xml
[2026-01-10 14:48:53] -rw-r--r--. 3 boincer umatlas 393433002 Jan  9 11:38 EVNT.47962006._000050.pool.root.1
[2026-01-10 14:48:53] -rw-r--r--. 3 boincer umatlas 393433002 Jan  9 11:38 ATLAS.root_0
[2026-01-10 14:48:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:38 start_atlas.sh
[2026-01-10 14:48:53] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:38 shared
[2026-01-10 14:48:53] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 11:38 input.tar.gz
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:38 boinc_lockfile
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 01:40 pandaJob.out
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas        57 Jan 10 01:40 setup.sh.local
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas    989374 Jan 10 01:40 agis_schedconf.cvmfs.json
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas      6909 Jan 10 14:37 init_data.xml
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas       533 Jan 10 14:42 boinc_task_state.xml
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas 397261769 Jan 10 14:47 HITS.47962010._000446.pool.root.1
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas      1041 Jan 10 14:47 memory_monitor_summary.json
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas        95 Jan 10 14:48 pilot_heartbeat.json
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas   1856820 Jan 10 14:48 log.47962010._000446.job.log.tgz.1
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas      8561 Jan 10 14:48 heartbeat.json
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:48 boinc_mmap_file
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas        29 Jan 10 14:48 wrapper_checkpoint.txt
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas      4894 Jan 10 14:48 pilotlog.txt
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas   6324676 Jan 10 14:48 log.47962010._000446.job.log.1
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas       353 Jan 10 14:48 output.list
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:48 runtime_log
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas   8202240 Jan 10 14:48 result.tar.gz
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas      9428 Jan 10 14:48 runtime_log.err
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas       785 Jan 10 14:48 fDlLDm3uLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1YmKDm7EVIfn.diag
[2026-01-10 14:48:53] -rw-r--r--. 1 boincer umatlas     23458 Jan 10 14:48 stderr.txt
[2026-01-10 14:48:53] HITS file was successfully produced:
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas 397261769 Jan 10 14:47 shared/HITS.pool.root.1
[2026-01-10 14:48:53]  *** Contents of shared directory: ***
[2026-01-10 14:48:53] total 780780
[2026-01-10 14:48:53] -rw-r--r--. 3 boincer umatlas 393433002 Jan  9 11:38 ATLAS.root_0
[2026-01-10 14:48:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:38 start_atlas.sh
[2026-01-10 14:48:53] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 11:38 input.tar.gz
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas 397261769 Jan 10 14:47 HITS.pool.root.1
[2026-01-10 14:48:53] -rw-------. 1 boincer umatlas   8202240 Jan 10 14:48 result.tar.gz
14:48:54 (475730): run_atlas exited; CPU time 104976.850638
14:48:54 (475730): called boinc_finish(0)

</stderr_txt>
]]>

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