Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
08:57:14 (986541): wrapper (7.7.26015): starting
08:57:14 (986541): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 08:57:14] Arguments: --nthreads 4
[2026-01-09 08:57:14] Threads: 4
[2026-01-09 08:57:14] Checking for CVMFS
[2026-01-09 08:57:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:57:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:57:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:57:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:57:14] 2.13.3.0 737630 173 60244 154950 3 253 5201815 6144000 4422 130560 0 592758 99.997 6904 777 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 08:57:14] CVMFS is ok
[2026-01-09 08:57:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:57:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 08:57:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 08:57:14] Further information can be found at the LHC@home message board.
[2026-01-09 08:57:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:57:14] Checking for apptainer binary...
[2026-01-09 08:57:14] apptainer is not installed, using version from CVMFS
[2026-01-09 08:57:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:57:15] desktop-b650ef
[2026-01-09 08:57:15] apptainer works
[2026-01-09 08:57:15] Set ATHENA_PROC_NUMBER=4
[2026-01-09 08:57:15] Set ATHENA_CORE_NUMBER=4
[2026-01-09 08:57:15] Starting ATLAS job with PandaID=6963186586
[2026-01-09 08:57:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:44:49]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:44:49] 2026-01-09 18:44:16,387 | INFO     | log transfer has been attempted: DONE
[2026-01-09 10:44:49] 2026-01-09 18:44:16,387 | INFO     | job 6963186586 has finished - writing final server update
[2026-01-09 10:44:49] 2026-01-09 18:44:16,388 | INFO     | total number of processed events: 400 (read)
[2026-01-09 10:44:49] 2026-01-09 18:44:16,388 | INFO     | executing command: lscpu
[2026-01-09 10:44:49] 2026-01-09 18:44:16,401 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 10:44:49] 2026-01-09 18:44:17,163 | INFO     | monitor loop #481: job 0:6963186586 is in state 'finished'
[2026-01-09 10:44:49] 2026-01-09 18:44:17,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,707 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 10:44:49] 2026-01-09 18:44:17,708 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4644.651531250001
[2026-01-09 10:44:49] 2026-01-09 18:44:17,710 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6963186586/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,710 | INFO     | extracted standard info from prmon json
[2026-01-09 10:44:49] 2026-01-09 18:44:17,710 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:44:49] 2026-01-09 18:44:17,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:44:49] 2026-01-09 18:44:17,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:44:49] 2026-01-09 18:44:17,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:44:49] 2026-01-09 18:44:17,711 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:44:49] 2026-01-09 18:44:17,711 | INFO     | sum of square deviations: 358927660.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of deviations: 2158638658.9999995
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean x: 1767981032.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean y: 2375479.561904762
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | intersect: -10630497462.172134
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | chi2: 1.108842140733864
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of deviations: 2200617669.5000014
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean x: 1767980879.5
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean y: 2375610.65
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | intersect: -12545990097.511848
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | chi2: 1.1103752425811728
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | current chi2=1.1103752425811728 (change=-0.13826150639388254 %)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | right removable region: 99
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of deviations: -5842762878.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean x: 1767981184.5
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean y: 2399431.28
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | intersect: 33319017307.953133
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | chi2: 0.04312645420622998
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | current chi2=0.04312645420622998 (change=96.11067683830201 %)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | sum of deviations: -3798883214.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean x: 1767981337.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | mean y: 2392363.957894737
[2026-01-09 10:44:49] 2026-01-09 18:44:17,712 | INFO     | intersect: 25268160304.168373
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | chi2: 0.03684219875201168
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | current chi2=0.03684219875201168 (change=14.571695192391875 %)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | left removable region: 20
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | sum of square deviations: 152858680.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | sum of deviations: 330467439.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | mean x: 1767981459.0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | mean y: 2376248.658227848
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | intersect: -3819848992.0360756
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | chi2: 0.0024146474280530086
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | current memory leak: 2.16 B/s (using 79 data points, chi2=0.00)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | could have reported an average CPU frequency of 4597 MHz (7 samples)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | ..............................
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . Timing measurements:
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . get job = 0 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . initial setup = 3 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . payload setup = 2 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . stage-in = 0 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . payload execution = 6392 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . stage-out = 0 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | . log creation = 0 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,713 | INFO     | ..............................
[2026-01-09 10:44:49] 2026-01-09 18:44:17,736 | INFO     | 
[2026-01-09 10:44:49] 2026-01-09 18:44:17,736 | INFO     | job summary report
[2026-01-09 10:44:49] 2026-01-09 18:44:17,736 | INFO     | --------------------------------------------------
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | PanDA job id: 6963186586
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | task id: 47898826
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | errors: (none)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | pilot state: finished 
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | transexitcode: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | exeerrorcode: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | exeerrordiag: 
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | exitcode: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | exitmsg: OK
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | cpuconsumptiontime: 24742 s
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | nevents: 400
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | neventsw: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | pid: 1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | pgrp: 1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | corecount: 4
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | event service: False
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | sizes: {0: 2283977, 2: 2284239, 11: 2284267, 6397: 2311393, 6398: 2311392, 6399: 2320460, 6400: 2320644, 6403: 2320838}
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | --------------------------------------------------
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | 
[2026-01-09 10:44:49] 2026-01-09 18:44:17,737 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-01-09 10:44:49] 2026-01-09 18:44:17,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | job 6963186586 has completed (purged errors)
[2026-01-09 10:44:49] 2026-01-09 18:44:17,746 | INFO     | overall cleanup function is called
[2026-01-09 10:44:49] 2026-01-09 18:44:18,752 | INFO     | --- collectZombieJob: --- 10, [1008307]
[2026-01-09 10:44:49] 2026-01-09 18:44:18,752 | INFO     | zombie collector waiting for pid 1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:18,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:44:49] 2026-01-09 18:44:18,752 | INFO     | collected zombie processes
[2026-01-09 10:44:49] 2026-01-09 18:44:18,752 | INFO     | will attempt to kill all subprocesses of pid=1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:18,817 | INFO     | process IDs to be killed: [1008307] (in reverse order)
[2026-01-09 10:44:49] 2026-01-09 18:44:18,850 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:44:49] 2026-01-09 18:44:18,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:44:49] 2026-01-09 18:44:18,852 | INFO     | did not find any defunct processes belonging to 1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:18,854 | INFO     | did not find any defunct processes belonging to 1008307
[2026-01-09 10:44:49] 2026-01-09 18:44:18,854 | INFO     | ready for new job
[2026-01-09 10:44:49] 2026-01-09 18:44:18,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:44:49] 2026-01-09 18:44:18,855 | INFO     | ***************************************
[2026-01-09 10:44:49] 2026-01-09 18:44:18,855 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:44:49] 2026-01-09 18:44:18,855 | INFO     | ***************************************
[2026-01-09 10:44:49] 2026-01-09 18:44:18,855 | INFO     | 
[2026-01-09 10:44:49] 2026-01-09 18:44:18,856 | INFO     | architecture information:
[2026-01-09 10:44:49] 2026-01-09 18:44:18,856 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:44:49] 2026-01-09 18:44:18,862 | INFO     | cat /etc/os-release:
[2026-01-09 10:44:49] NAME="CentOS Linux"
[2026-01-09 10:44:49] VERSION="7 (Core)"
[2026-01-09 10:44:49] ID="centos"
[2026-01-09 10:44:49] ID_LIKE="rhel fedora"
[2026-01-09 10:44:49] VERSION_ID="7"
[2026-01-09 10:44:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:44:49] ANSI_COLOR="0;31"
[2026-01-09 10:44:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:44:49] HOME_URL="https://www.centos.org/"
[2026-01-09 10:44:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:44:49] 
[2026-01-09 10:44:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:44:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:44:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:44:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:44:49] 
[2026-01-09 10:44:49] 2026-01-09 18:44:18,862 | INFO     | ***************************************
[2026-01-09 10:44:49] 2026-01-09 18:44:19,365 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | INFO     | sufficient remaining disk space (387384868864 B)
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | INFO     | update_server=False
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:44:49] 2026-01-09 18:44:19,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:44:49] 2026-01-09 18:44:19,515 | INFO     | all data control threads have been joined
[2026-01-09 10:44:49] 2026-01-09 18:44:19,561 | INFO     | all payload control threads have been joined
[2026-01-09 10:44:49] 2026-01-09 18:44:19,666 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 10:44:49] 2026-01-09 18:44:19,666 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 10:44:49] 2026-01-09 18:44:19,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:44:49] 2026-01-09 18:44:19,666 | INFO     | will abort loop
[2026-01-09 10:44:49] 2026-01-09 18:44:19,992 | INFO     | all job control threads have been joined
[2026-01-09 10:44:49] 2026-01-09 18:44:20,378 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,379 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,520 | INFO     | [data] control thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,566 | INFO     | [payload] control thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,671 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,997 | INFO     | [job] control thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:20,999 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,072 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,289 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,379 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:44:49] 2026-01-09 18:44:21,554 | INFO     | [job] validate thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,681 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,749 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:21,799 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:25,494 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:44:49] 2026-01-09 18:44:32,058 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:44:49] 2026-01-09 18:44:33,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138206823511872)>', '<ExcThread(monitor, started 138206494295808)>']
[2026-01-09 10:44:49] 2026-01-09 18:44:38,131 | INFO     | all workflow threads have been joined
[2026-01-09 10:44:49] 2026-01-09 18:44:38,131 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:44:49] 2026-01-09 18:44:38,131 | INFO     | traces error code: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:38,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | INFO     | PID=990387 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | INFO     | .. there are 8 such processes running
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:44:49] 2026-01-09 18:44:49,313 | INFO     | [monitor] control thread has ended
[2026-01-09 10:44:49] 2026-01-09 18:44:49,359 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:44:49] 2026-01-09 18:44:49,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:44:49] 2026-01-09 18:44:49,361 [wrapper] pilotpid: 990387
[2026-01-09 10:44:49] 2026-01-09 18:44:49,362 [wrapper] Pilot exit status: 0
[2026-01-09 10:44:49] 2026-01-09 18:44:49,366 [wrapper] pandaids: 6963186586
[2026-01-09 10:44:49] 2026-01-09 18:44:49,387 [wrapper] cleanup supervisor_pilot 1140451 990388
[2026-01-09 10:44:49] 2026-01-09 18:44:49,388 [wrapper] Test setup, not cleaning
[2026-01-09 10:44:49] 2026-01-09 18:44:49,389 [wrapper] apfmon messages muted
[2026-01-09 10:44:49] 2026-01-09 18:44:49,390 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:44:49] 2026-01-09 18:44:49,391 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:44:49]  *** Error codes and diagnostics ***
[2026-01-09 10:44:49]     "exeErrorCode": 0,
[2026-01-09 10:44:49]     "exeErrorDiag": "",
[2026-01-09 10:44:49]     "pilotErrorCode": 0,
[2026-01-09 10:44:49]     "pilotErrorDiag": "",
[2026-01-09 10:44:49]  *** Listing of results directory ***
[2026-01-09 10:44:49] total 430304
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:57 pilot3.tar.gz
[2026-01-09 10:44:49] -rwx------ 1 boinc boinc     36322 Jan  8 16:58 runpilot2-wrapper.sh
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:01 queuedata.json
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:44:49] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:57 run_atlas
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:57 job.xml
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc 222913346 Jan  9 08:57 EVNT.47898824._001401.pool.root.1
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc    592401 Jan  9 08:57 input.tar.gz
[2026-01-09 10:44:49] drwxrwx--x 2 boinc boinc      4096 Jan  9 08:57 shared
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:57 boinc_setup_complete
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:57 start_atlas.sh
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc     10174 Jan  9 08:57 init_data.xml
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:57 boinc_lockfile
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc      2519 Jan  9 08:57 pandaJob.out
[2026-01-09 10:44:49] -rw------- 1 boinc boinc    989356 Jan  9 08:57 agis_schedconf.cvmfs.json
[2026-01-09 10:44:49] -rw------- 1 boinc boinc   1516240 Jan  9 08:57 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:44:49] drwx------ 5 boinc boinc      4096 Jan  9 08:57 pilot3
[2026-01-09 10:44:49] -rw------- 1 boinc boinc 211322620 Jan  9 10:43 HITS.47898826._036562.pool.root.1
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc       529 Jan  9 10:43 boinc_task_state.xml
[2026-01-09 10:44:49] -rw------- 1 boinc boinc      1017 Jan  9 10:44 memory_monitor_summary.json
[2026-01-09 10:44:49] -rw------- 1 boinc boinc    291513 Jan  9 10:44 log.47898826._036562.job.log.tgz.1
[2026-01-09 10:44:49] -rw------- 1 boinc boinc      7739 Jan  9 10:44 heartbeat.json
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:44 boinc_mmap_file
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc        27 Jan  9 10:44 wrapper_checkpoint.txt
[2026-01-09 10:44:49] -rw------- 1 boinc boinc        95 Jan  9 10:44 pilot_heartbeat.json
[2026-01-09 10:44:49] -rw------- 1 boinc boinc       821 Jan  9 10:44 pilotlog.txt
[2026-01-09 10:44:49] -rw------- 1 boinc boinc    945500 Jan  9 10:44 log.47898826._036562.job.log.1
[2026-01-09 10:44:49] -rw------- 1 boinc boinc       357 Jan  9 10:44 output.list
[2026-01-09 10:44:49] -rw------- 1 boinc boinc   1259520 Jan  9 10:44 result.tar.gz
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:44 runtime_log
[2026-01-09 10:44:49] -rw------- 1 boinc boinc       657 Jan  9 10:44 82YKDmO0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkulKDmvcFtTn.diag
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc      8948 Jan  9 10:44 runtime_log.err
[2026-01-09 10:44:49] -rw-r--r-- 1 boinc boinc     21399 Jan  9 10:44 stderr.txt
[2026-01-09 10:44:49] HITS file was successfully produced:
[2026-01-09 10:44:49] -rw------- 1 boinc boinc 211322620 Jan  9 10:43 shared/HITS.pool.root.1
[2026-01-09 10:44:49]  *** Contents of shared directory: ***
[2026-01-09 10:44:49] total 425900
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc 222913346 Jan  9 08:57 ATLAS.root_0
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc    592401 Jan  9 08:57 input.tar.gz
[2026-01-09 10:44:49] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:57 start_atlas.sh
[2026-01-09 10:44:49] -rw------- 1 boinc boinc 211322620 Jan  9 10:43 HITS.pool.root.1
[2026-01-09 10:44:49] -rw------- 1 boinc boinc   1259520 Jan  9 10:44 result.tar.gz
10:44:50 (986541): run_atlas exited; CPU time 24814.362539
10:44:50 (986541): called boinc_finish(0)

</stderr_txt>
]]>

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