Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
08:10:47 (532608): wrapper (7.7.26015): starting
08:10:47 (532608): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 08:10:48] Arguments: --nthreads 4
[2026-01-09 08:10:48] Threads: 4
[2026-01-09 08:10:48] Checking for CVMFS
[2026-01-09 08:10:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:10:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:10:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:10:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:10:50] 2.12.7.0 5258 636 57192 154948 0 131 5162914 6144000 851 130560 0 1089435 99.997 19184 920 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 08:10:50] CVMFS is ok
[2026-01-09 08:10:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:10:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 08:10:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 08:10:50] Further information can be found at the LHC@home message board.
[2026-01-09 08:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:10:50] Checking for apptainer binary...
[2026-01-09 08:10:50] apptainer is not installed, using version from CVMFS
[2026-01-09 08:10:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:10:50] k8plus
[2026-01-09 08:10:50] apptainer works
[2026-01-09 08:10:50] Set ATHENA_PROC_NUMBER=4
[2026-01-09 08:10:50] Set ATHENA_CORE_NUMBER=4
[2026-01-09 08:10:50] Starting ATLAS job with PandaID=6963195759
[2026-01-09 08:10:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:11:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:11:40] 2026-01-09 21:10:35,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,481 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 13:11:40] 2026-01-09 21:10:36,483 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4030.9981875
[2026-01-09 13:11:40] 2026-01-09 21:10:36,485 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963195759/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,485 | INFO     | extracted standard info from prmon json
[2026-01-09 13:11:40] 2026-01-09 21:10:36,485 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:11:40] 2026-01-09 21:10:36,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:11:40] 2026-01-09 21:10:36,488 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:11:40] 2026-01-09 21:10:36,488 | INFO     | sum of square deviations: 7960484140.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | sum of deviations: 101893526540.99991
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | mean x: 1767984053.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | mean y: 2270805.861016949
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | intersect: -22627776168.6965
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | chi2: 2.960424111389316
[2026-01-09 13:11:40] 2026-01-09 21:10:36,490 | INFO     | sum of square deviations: 7562532492.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,491 | INFO     | sum of deviations: 138355840482.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,491 | INFO     | mean x: 1767983900.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,491 | INFO     | mean y: 2284632.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,492 | INFO     | intersect: -32342819174.431664
[2026-01-09 13:11:40] 2026-01-09 21:10:36,492 | INFO     | chi2: 1.3705848536810117
[2026-01-09 13:11:40] 2026-01-09 21:10:36,492 | INFO     | current chi2=1.3705848536810117 (change=53.70309110751699 %)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,492 | INFO     | sum of square deviations: 7178069470.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,493 | INFO     | sum of deviations: 134159257124.00002
[2026-01-09 13:11:40] 2026-01-09 21:10:36,493 | INFO     | mean x: 1767983748.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,493 | INFO     | mean y: 2282968.0877192984
[2026-01-09 13:11:40] 2026-01-09 21:10:36,493 | INFO     | intersect: -33041613755.16108
[2026-01-09 13:11:40] 2026-01-09 21:10:36,493 | INFO     | chi2: 1.368792191043102
[2026-01-09 13:11:40] 2026-01-09 21:10:36,494 | INFO     | current chi2=1.368792191043102 (change=0.1307954507957004 %)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,494 | INFO     | right removable region: 284
[2026-01-09 13:11:40] 2026-01-09 21:10:36,494 | INFO     | sum of square deviations: 7562532492.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | sum of deviations: 63237694048.999985
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | mean x: 1767984205.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | mean y: 2285499.0896551725
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | intersect: -14781551050.604788
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | chi2: 1.6499296058934707
[2026-01-09 13:11:40] 2026-01-09 21:10:36,495 | INFO     | current chi2=1.6499296058934707 (change=44.26712039177506 %)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,496 | INFO     | sum of square deviations: 7178069470.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | sum of deviations: 55453147573.000015
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | mean x: 1767984358.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | mean y: 2288584.8105263156
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | intersect: -13656021343.87977
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | chi2: 1.6434066175064297
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | current chi2=1.6434066175064297 (change=0.39534949635070554 %)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,497 | INFO     | left removable region: 20
[2026-01-09 13:11:40] 2026-01-09 21:10:36,498 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | sum of deviations: 74670076545.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | mean x: 1767984327.5
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | mean y: 2307400.465909091
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | intersect: -23136503352.483482
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | chi2: 0.025720523149263187
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | current memory leak: 13.09 B/s (using 264 data points, chi2=0.03)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,499 | INFO     | could have reported an average CPU frequency of 3889 MHz (13 samples)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | ..............................
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . Timing measurements:
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . get job = 0 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . initial setup = 3 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . payload setup = 4 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . stage-in = 0 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . payload execution = 17944 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . stage-out = 3 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | . log creation = 0 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,500 | INFO     | ..............................
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | 
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | job summary report
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | --------------------------------------------------
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | PanDA job id: 6963195759
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | task id: 47962010
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | errors: (none)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | pilot state: finished 
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | transexitcode: 0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | exeerrorcode: 0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | exeerrordiag: 
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | exitcode: 0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | exitmsg: OK
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | cpuconsumptiontime: 70926 s
[2026-01-09 13:11:40] 2026-01-09 21:10:36,551 | INFO     | nevents: 450
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | neventsw: 0
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | pid: 543388
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | pgrp: 543388
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | corecount: 4
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | event service: False
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | sizes: {0: 2284627, 3: 2284889, 11: 2284917, 17952: 2318325, 17953: 2318324, 17956: 2327572, 17959: 2327762}
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | --------------------------------------------------
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | 
[2026-01-09 13:11:40] 2026-01-09 21:10:36,552 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | job 6963195759 has completed (purged errors)
[2026-01-09 13:11:40] 2026-01-09 21:10:36,565 | INFO     | overall cleanup function is called
[2026-01-09 13:11:40] 2026-01-09 21:10:37,575 | INFO     | --- collectZombieJob: --- 10, [543388]
[2026-01-09 13:11:40] 2026-01-09 21:10:37,575 | INFO     | zombie collector waiting for pid 543388
[2026-01-09 13:11:40] 2026-01-09 21:10:37,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:11:40] 2026-01-09 21:10:37,575 | INFO     | collected zombie processes
[2026-01-09 13:11:40] 2026-01-09 21:10:37,575 | INFO     | will attempt to kill all subprocesses of pid=543388
[2026-01-09 13:11:40] 2026-01-09 21:10:37,657 | INFO     | process IDs to be killed: [543388] (in reverse order)
[2026-01-09 13:11:40] 2026-01-09 21:10:37,695 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:11:40] 2026-01-09 21:10:37,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:11:40] 2026-01-09 21:10:37,698 | INFO     | did not find any defunct processes belonging to 543388
[2026-01-09 13:11:40] 2026-01-09 21:10:37,701 | INFO     | did not find any defunct processes belonging to 543388
[2026-01-09 13:11:40] 2026-01-09 21:10:37,701 | INFO     | ready for new job
[2026-01-09 13:11:40] 2026-01-09 21:10:37,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:11:40] 2026-01-09 21:10:37,703 | INFO     | ***************************************
[2026-01-09 13:11:40] 2026-01-09 21:10:37,703 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:11:40] 2026-01-09 21:10:37,703 | INFO     | ***************************************
[2026-01-09 13:11:40] 2026-01-09 21:10:37,703 | INFO     | 
[2026-01-09 13:11:40] 2026-01-09 21:10:37,703 | INFO     | architecture information:
[2026-01-09 13:11:40] 2026-01-09 21:10:37,704 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:11:40] 2026-01-09 21:10:37,712 | INFO     | cat /etc/os-release:
[2026-01-09 13:11:40] NAME="CentOS Linux"
[2026-01-09 13:11:40] VERSION="7 (Core)"
[2026-01-09 13:11:40] ID="centos"
[2026-01-09 13:11:40] ID_LIKE="rhel fedora"
[2026-01-09 13:11:40] VERSION_ID="7"
[2026-01-09 13:11:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:11:40] ANSI_COLOR="0;31"
[2026-01-09 13:11:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:11:40] HOME_URL="https://www.centos.org/"
[2026-01-09 13:11:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:11:40] 
[2026-01-09 13:11:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:11:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:11:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:11:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:11:40] 
[2026-01-09 13:11:40] 2026-01-09 21:10:37,712 | INFO     | ***************************************
[2026-01-09 13:11:40] 2026-01-09 21:10:38,214 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | INFO     | sufficient remaining disk space (113758961664 B)
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | INFO     | update_server=False
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:11:40] 2026-01-09 21:10:38,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:11:40] 2026-01-09 21:10:38,287 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 13:11:40] 2026-01-09 21:10:38,287 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 13:11:40] 2026-01-09 21:10:38,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:11:40] 2026-01-09 21:10:38,287 | INFO     | will abort loop
[2026-01-09 13:11:40] 2026-01-09 21:10:38,845 | INFO     | all job control threads have been joined
[2026-01-09 13:11:40] 2026-01-09 21:10:38,866 | INFO     | all payload control threads have been joined
[2026-01-09 13:11:40] 2026-01-09 21:10:39,183 | INFO     | all data control threads have been joined
[2026-01-09 13:11:40] 2026-01-09 21:10:39,230 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,231 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,292 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,299 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:11:40] 2026-01-09 21:10:39,595 | INFO     | [job] validate thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,781 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,840 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,850 | INFO     | [job] control thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,855 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,871 | INFO     | [payload] control thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:39,902 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:40,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:11:40] 2026-01-09 21:10:40,188 | INFO     | [data] control thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:40,243 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:40,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:41,589 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:10:44,136 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:11:40] 2026-01-09 21:11:00,288 [wrapper] supervise_pilot (15 min periods counter: 21)
[2026-01-09 13:11:40] 2026-01-09 21:11:07,997 | INFO     | PID=536783 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 13:11:40] 2026-01-09 21:11:07,997 | INFO     | .. there are 4 such processes running
[2026-01-09 13:11:40] 2026-01-09 21:11:07,997 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:11:40] 2026-01-09 21:11:07,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:11:40] 2026-01-09 21:11:07,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:11:40] 2026-01-09 21:11:33,853 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:11:40] 2026-01-09 21:11:35,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133344140621632)>', '<ExcThread(monitor, started 133343601473280)>']
[2026-01-09 13:11:40] 2026-01-09 21:11:36,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:11:40] 2026-01-09 21:11:36,130 | INFO     | [monitor] control thread has ended
[2026-01-09 13:11:40] 2026-01-09 21:11:40,251 | INFO     | all workflow threads have been joined
[2026-01-09 13:11:40] 2026-01-09 21:11:40,251 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:11:40] 2026-01-09 21:11:40,251 | INFO     | traces error code: 0
[2026-01-09 13:11:40] 2026-01-09 21:11:40,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:11:40] 2026-01-09 21:11:40,325 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:11:40] 2026-01-09 21:11:40,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:11:40] 2026-01-09 21:11:40,329 [wrapper] pilotpid: 536783
[2026-01-09 13:11:40] 2026-01-09 21:11:40,330 [wrapper] Pilot exit status: 0
[2026-01-09 13:11:40] 2026-01-09 21:11:40,336 [wrapper] pandaids: 6963195759
[2026-01-09 13:11:40] 2026-01-09 21:11:40,360 [wrapper] cleanup supervisor_pilot  737964 536784
[2026-01-09 13:11:40] 2026-01-09 21:11:40,362 [wrapper] Test setup, not cleaning
[2026-01-09 13:11:40] 2026-01-09 21:11:40,364 [wrapper] apfmon messages muted
[2026-01-09 13:11:40] 2026-01-09 21:11:40,365 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:11:40] 2026-01-09 21:11:40,367 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:11:40]  *** Error codes and diagnostics ***
[2026-01-09 13:11:40]     "exeErrorCode": 0,
[2026-01-09 13:11:40]     "exeErrorDiag": "",
[2026-01-09 13:11:40]     "pilotErrorCode": 0,
[2026-01-09 13:11:40]     "pilotErrorDiag": "",
[2026-01-09 13:11:40]  *** Listing of results directory ***
[2026-01-09 13:11:40] total 776420
[2026-01-09 13:11:40] -rwx------ 1 boinc boinc     36322 Jan  8 23:16 runpilot2-wrapper.sh
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc      5112 Jan  8 23:20 queuedata.json
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc    579449 Jan  8 23:20 pilot3.tar.gz
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:11:40] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:10 run_atlas
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:10 job.xml
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc 392494414 Jan  9 08:10 EVNT.47962006._000057.pool.root.1
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc    592612 Jan  9 08:10 input.tar.gz
[2026-01-09 13:11:40] drwxrwx--x 2 boinc boinc      4096 Jan  9 08:10 shared
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:10 boinc_setup_complete
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:10 start_atlas.sh
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:10 boinc_lockfile
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc      2891 Jan  9 08:10 pandaJob.out
[2026-01-09 13:11:40] -rw------- 1 boinc boinc    989377 Jan  9 08:11 agis_schedconf.cvmfs.json
[2026-01-09 13:11:40] drwx------ 5 boinc boinc      4096 Jan  9 08:11 pilot3
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc      7251 Jan  9 08:30 init_data.xml
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc       531 Jan  9 13:07 boinc_task_state.xml
[2026-01-09 13:11:40] -rw------- 1 boinc boinc 391345455 Jan  9 13:10 HITS.47962010._000590.pool.root.1
[2026-01-09 13:11:40] -rw------- 1 boinc boinc      1026 Jan  9 13:10 memory_monitor_summary.json
[2026-01-09 13:11:40] -rw------- 1 boinc boinc        95 Jan  9 13:10 pilot_heartbeat.json
[2026-01-09 13:11:40] -rw------- 1 boinc boinc   1516240 Jan  9 13:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:11:40] -rw------- 1 boinc boinc   1039339 Jan  9 13:10 log.47962010._000590.job.log.tgz.1
[2026-01-09 13:11:40] -rw------- 1 boinc boinc      8553 Jan  9 13:10 heartbeat.json
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc      8192 Jan  9 13:11 boinc_mmap_file
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc        28 Jan  9 13:11 wrapper_checkpoint.txt
[2026-01-09 13:11:40] -rw------- 1 boinc boinc      5016 Jan  9 13:11 pilotlog.txt
[2026-01-09 13:11:40] -rw------- 1 boinc boinc   2610579 Jan  9 13:11 log.47962010._000590.job.log.1
[2026-01-09 13:11:40] -rw------- 1 boinc boinc       353 Jan  9 13:11 output.list
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc       620 Jan  9 13:11 runtime_log
[2026-01-09 13:11:40] -rw------- 1 boinc boinc   3665920 Jan  9 13:11 result.tar.gz
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc      8909 Jan  9 13:11 runtime_log.err
[2026-01-09 13:11:40] -rw------- 1 boinc boinc       656 Jan  9 13:11 kqRMDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdNhKDmtufpNo.diag
[2026-01-09 13:11:40] -rw-r--r-- 1 boinc boinc     21191 Jan  9 13:11 stderr.txt
[2026-01-09 13:11:40] HITS file was successfully produced:
[2026-01-09 13:11:40] -rw------- 1 boinc boinc 391345455 Jan  9 13:10 shared/HITS.pool.root.1
[2026-01-09 13:11:40]  *** Contents of shared directory: ***
[2026-01-09 13:11:40] total 769656
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc 392494414 Jan  9 08:10 ATLAS.root_0
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc    592612 Jan  9 08:10 input.tar.gz
[2026-01-09 13:11:40] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:10 start_atlas.sh
[2026-01-09 13:11:40] -rw------- 1 boinc boinc 391345455 Jan  9 13:10 HITS.pool.root.1
[2026-01-09 13:11:40] -rw------- 1 boinc boinc   3665920 Jan  9 13:11 result.tar.gz
13:11:41 (532608): run_atlas exited; CPU time 70964.864385
13:11:41 (532608): called boinc_finish(0)

</stderr_txt>
]]>

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