Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:04:50 (255087): wrapper (7.7.26015): starting
14:04:50 (255087): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:04:50] Arguments: --nthreads 8
[2026-01-09 14:04:50] Threads: 8
[2026-01-09 14:04:50] Checking for CVMFS
[2026-01-09 14:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:04:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:04:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:04:51] 2.13.3.0 11460 93807 154900 154953 1 307 16671413 32935936 21385 16776704 0 757432257 99.641 694321422 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:04:51] CVMFS is ok
[2026-01-09 14:04:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:04:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:04:51] Further information can be found at the LHC@home message board.
[2026-01-09 14:04:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:04:51] Checking for apptainer binary...
[2026-01-09 14:04:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:04:51] Running /usr/bin/apptainer --version
[2026-01-09 14:04:51] apptainer version 1.4.5-2.el9
[2026-01-09 14:04:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:04:51] c7-3-34.aglt2.org
[2026-01-09 14:04:51] apptainer works
[2026-01-09 14:04:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:04:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:04:51] Starting ATLAS job with PandaID=6963194220
[2026-01-09 14:04:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:26:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:26:17] 2026-01-10 05:25:37,575 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:26:17] 2026-01-10 05:25:37,578 | INFO     | monitor loop #2533: job 0:6963194220 is in state 'finished'
[2026-01-10 00:26:17] 2026-01-10 05:25:37,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,581 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3112.9633541666662
[2026-01-10 00:26:17] 2026-01-10 05:25:37,594 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963194220/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,594 | INFO     | extracted standard info from prmon json
[2026-01-10 00:26:17] 2026-01-10 05:25:37,595 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:26:17] 2026-01-10 05:25:37,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:26:17] 2026-01-10 05:25:37,602 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:26:17] 2026-01-10 05:25:37,603 | INFO     | sum of square deviations: 70379439854.27689
[2026-01-10 00:26:17] 2026-01-10 05:25:37,610 | INFO     | sum of deviations: 462021656965.38257
[2026-01-10 00:26:17] 2026-01-10 05:25:37,610 | INFO     | mean x: 1768004113.9655738
[2026-01-10 00:26:17] 2026-01-10 05:25:37,610 | INFO     | mean y: 2808457.9229508196
[2026-01-10 00:26:17] 2026-01-10 05:25:37,610 | INFO     | intersect: -11603652064.458544
[2026-01-10 00:26:17] 2026-01-10 05:25:37,610 | INFO     | chi2: 3.687298264227501
[2026-01-10 00:26:17] 2026-01-10 05:25:37,611 | INFO     | sum of square deviations: 68662945450.68508
[2026-01-10 00:26:17] 2026-01-10 05:25:37,618 | INFO     | sum of deviations: 586604588416.4084
[2026-01-10 00:26:17] 2026-01-10 05:25:37,618 | INFO     | mean x: 1768003961.4694214
[2026-01-10 00:26:17] 2026-01-10 05:25:37,618 | INFO     | mean y: 2819502.9950413224
[2026-01-10 00:26:17] 2026-01-10 05:25:37,618 | INFO     | intersect: -15101677243.087992
[2026-01-10 00:26:17] 2026-01-10 05:25:37,619 | INFO     | chi2: 2.1436505674900364
[2026-01-10 00:26:17] 2026-01-10 05:25:37,619 | INFO     | current chi2=2.1436505674900364 (change=41.86392274563834 %)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,619 | INFO     | sum of square deviations: 66974554448.51833
[2026-01-10 00:26:17] 2026-01-10 05:25:37,626 | INFO     | sum of deviations: 587917497239.9601
[2026-01-10 00:26:17] 2026-01-10 05:25:37,626 | INFO     | mean x: 1768003808.9716666
[2026-01-10 00:26:17] 2026-01-10 05:25:37,626 | INFO     | mean y: 2819616.88
[2026-01-10 00:26:17] 2026-01-10 05:25:37,626 | INFO     | intersect: -15517110049.547728
[2026-01-10 00:26:17] 2026-01-10 05:25:37,627 | INFO     | chi2: 2.1179601122570344
[2026-01-10 00:26:17] 2026-01-10 05:25:37,627 | INFO     | current chi2=2.1179601122570344 (change=1.1984441691484478 %)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,627 | INFO     | right removable region: 599
[2026-01-10 00:26:17] 2026-01-10 05:25:37,628 | INFO     | sum of square deviations: 68662772210.68508
[2026-01-10 00:26:17] 2026-01-10 05:25:37,634 | INFO     | sum of deviations: 323779457624.0151
[2026-01-10 00:26:17] 2026-01-10 05:25:37,634 | INFO     | mean x: 1768004266.4694214
[2026-01-10 00:26:17] 2026-01-10 05:25:37,634 | INFO     | mean y: 2820702.2710743803
[2026-01-10 00:26:17] 2026-01-10 05:25:37,634 | INFO     | intersect: -8334207414.186654
[2026-01-10 00:26:17] 2026-01-10 05:25:37,635 | INFO     | chi2: 1.7124142534621565
[2026-01-10 00:26:17] 2026-01-10 05:25:37,635 | INFO     | current chi2=1.7124142534621565 (change=53.55910667506275 %)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,635 | INFO     | sum of square deviations: 66974318317.460014
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | sum of deviations: 294419274744.94006
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | mean x: 1768004418.97
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | mean y: 2823352.9966666666
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | intersect: -7769328598.019081
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | chi2: 1.6791112006878333
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | current chi2=1.6791112006878333 (change=1.94480118972329 %)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,642 | INFO     | left removable region: 20
[2026-01-10 00:26:17] 2026-01-10 05:25:37,643 | INFO     | sum of square deviations: 60185031488.48004
[2026-01-10 00:26:17] 2026-01-10 05:25:37,648 | INFO     | sum of deviations: 370462934095.7961
[2026-01-10 00:26:17] 2026-01-10 05:25:37,648 | INFO     | mean x: 1768004388.478411
[2026-01-10 00:26:17] 2026-01-10 05:25:37,649 | INFO     | mean y: 2839407.3436960275
[2026-01-10 00:26:17] 2026-01-10 05:25:37,649 | INFO     | intersect: -10879934549.089722
[2026-01-10 00:26:17] 2026-01-10 05:25:37,649 | INFO     | chi2: 0.06521865666275785
[2026-01-10 00:26:17] 2026-01-10 05:25:37,649 | INFO     | current memory leak: 6.16 B/s (using 579 data points, chi2=0.07)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | could have reported an average CPU frequency of 3145 MHz (24 samples)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | ..............................
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . Timing measurements:
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . get job = 0 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . initial setup = 2 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . payload setup = 9 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . stage-in = 0 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . payload execution = 37192 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . stage-out = 2 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | . log creation = 0 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,650 | INFO     | ..............................
[2026-01-10 00:26:17] 2026-01-10 05:25:37,737 | INFO     | 
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | job summary report
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | --------------------------------------------------
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | PanDA job id: 6963194220
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | task id: 47962010
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | errors: (none)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | pilot state: finished 
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | transexitcode: 0
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | exeerrorcode: 0
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | exeerrordiag: 
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | exitcode: 0
[2026-01-10 00:26:17] 2026-01-10 05:25:37,738 | INFO     | exitmsg: OK
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | cpuconsumptiontime: 103013 s
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | nevents: 450
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | neventsw: 0
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | pid: 267852
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | pgrp: 267852
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | corecount: 8
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | event service: False
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | sizes: {0: 2284620, 6: 2284882, 11: 2284910, 37206: 2327766, 37208: 2336816, 37215: 2337006}
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | --------------------------------------------------
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | 
[2026-01-10 00:26:17] 2026-01-10 05:25:37,739 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 00:26:17] 2026-01-10 05:25:37,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | job 6963194220 has completed (purged errors)
[2026-01-10 00:26:17] 2026-01-10 05:25:37,768 | INFO     | overall cleanup function is called
[2026-01-10 00:26:17] 2026-01-10 05:25:38,785 | INFO     | --- collectZombieJob: --- 10, [267852]
[2026-01-10 00:26:17] 2026-01-10 05:25:38,785 | INFO     | zombie collector waiting for pid 267852
[2026-01-10 00:26:17] 2026-01-10 05:25:38,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:26:17] 2026-01-10 05:25:38,786 | INFO     | collected zombie processes
[2026-01-10 00:26:17] 2026-01-10 05:25:38,786 | INFO     | will attempt to kill all subprocesses of pid=267852
[2026-01-10 00:26:17] 2026-01-10 05:25:39,201 | INFO     | process IDs to be killed: [267852] (in reverse order)
[2026-01-10 00:26:17] 2026-01-10 05:25:39,280 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:26:17] 2026-01-10 05:25:39,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:26:17] 2026-01-10 05:25:39,290 | INFO     | did not find any defunct processes belonging to 267852
[2026-01-10 00:26:17] 2026-01-10 05:25:39,298 | INFO     | did not find any defunct processes belonging to 267852
[2026-01-10 00:26:17] 2026-01-10 05:25:39,299 | INFO     | ready for new job
[2026-01-10 00:26:17] 2026-01-10 05:25:39,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:26:17] 2026-01-10 05:25:39,301 | INFO     | ***************************************
[2026-01-10 00:26:17] 2026-01-10 05:25:39,301 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:26:17] 2026-01-10 05:25:39,301 | INFO     | ***************************************
[2026-01-10 00:26:17] 2026-01-10 05:25:39,301 | INFO     | 
[2026-01-10 00:26:17] 2026-01-10 05:25:39,304 | INFO     | architecture information:
[2026-01-10 00:26:17] 2026-01-10 05:25:39,305 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:26:17] 2026-01-10 05:25:39,314 | INFO     | cat /etc/os-release:
[2026-01-10 00:26:17] NAME="CentOS Linux"
[2026-01-10 00:26:17] VERSION="7 (Core)"
[2026-01-10 00:26:17] ID="centos"
[2026-01-10 00:26:17] ID_LIKE="rhel fedora"
[2026-01-10 00:26:17] VERSION_ID="7"
[2026-01-10 00:26:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:26:17] ANSI_COLOR="0;31"
[2026-01-10 00:26:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:26:17] HOME_URL="https://www.centos.org/"
[2026-01-10 00:26:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:26:17] 
[2026-01-10 00:26:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:26:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:26:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:26:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:26:17] 
[2026-01-10 00:26:17] 2026-01-10 05:25:39,314 | INFO     | ***************************************
[2026-01-10 00:26:17] 2026-01-10 05:25:39,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 00:26:17] 2026-01-10 05:25:39,829 | INFO     | sufficient remaining disk space (75365351424 B)
[2026-01-10 00:26:17] 2026-01-10 05:25:39,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:26:17] 2026-01-10 05:25:39,829 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:26:17] 2026-01-10 05:25:39,829 | INFO     | update_server=False
[2026-01-10 00:26:17] 2026-01-10 05:25:39,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:26:17] 2026-01-10 05:25:39,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:26:17] 2026-01-10 05:25:39,867 | INFO     | all job control threads have been joined
[2026-01-10 00:26:17] 2026-01-10 05:25:40,081 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 00:26:17] 2026-01-10 05:25:40,081 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 00:26:17] 2026-01-10 05:25:40,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:26:17] 2026-01-10 05:25:40,082 | INFO     | will abort loop
[2026-01-10 00:26:17] 2026-01-10 05:25:40,096 | INFO     | all data control threads have been joined
[2026-01-10 00:26:17] 2026-01-10 05:25:40,657 | INFO     | all payload control threads have been joined
[2026-01-10 00:26:17] 2026-01-10 05:25:40,834 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:40,872 | INFO     | [job] control thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,009 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,061 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,086 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,101 | INFO     | [data] control thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,210 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,401 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,428 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,569 | INFO     | [job] validate thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,657 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,662 | INFO     | [payload] control thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,834 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:41,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:26:17] 2026-01-10 05:25:42,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:26:17] 2026-01-10 05:25:43,726 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:25:45,941 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:26:17] 2026-01-10 05:26:09,918 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:26:17] 2026-01-10 05:26:10,910 | INFO     | PID=258837 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 00:26:17] 2026-01-10 05:26:10,911 | INFO     | .. there are 14 such processes running
[2026-01-10 00:26:17] 2026-01-10 05:26:10,911 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:26:17] 2026-01-10 05:26:10,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:26:17] 2026-01-10 05:26:10,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:26:17] 2026-01-10 05:26:11,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883070510912)>', '<ExcThread(monitor, started 139882403960576)>']
[2026-01-10 00:26:17] 2026-01-10 05:26:11,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:26:17] 2026-01-10 05:26:11,916 | INFO     | [monitor] control thread has ended
[2026-01-10 00:26:17] 2026-01-10 05:26:16,915 | INFO     | all workflow threads have been joined
[2026-01-10 00:26:17] 2026-01-10 05:26:16,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:26:17] 2026-01-10 05:26:16,915 | INFO     | traces error code: 0
[2026-01-10 00:26:17] 2026-01-10 05:26:16,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:26:17] 2026-01-10 05:26:17,045 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:26:17] 2026-01-10 05:26:17,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:26:17] 2026-01-10 05:26:17,051 [wrapper] pilotpid: 258837
[2026-01-10 00:26:17] 2026-01-10 05:26:17,054 [wrapper] Pilot exit status: 0
[2026-01-10 00:26:17] 2026-01-10 05:26:17,068 [wrapper] pandaids: 6963194220
[2026-01-10 00:26:17] 2026-01-10 05:26:17,161 [wrapper] cleanup supervisor_pilot 1714646 258838
[2026-01-10 00:26:17] 2026-01-10 05:26:17,166 [wrapper] Test setup, not cleaning
[2026-01-10 00:26:17] 2026-01-10 05:26:17,170 [wrapper] apfmon messages muted
[2026-01-10 00:26:17] 2026-01-10 05:26:17,173 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:26:17] 2026-01-10 05:26:17,176 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:26:17]  *** Error codes and diagnostics ***
[2026-01-10 00:26:17]     "exeErrorCode": 0,
[2026-01-10 00:26:17]     "exeErrorDiag": "",
[2026-01-10 00:26:17]     "pilotErrorCode": 0,
[2026-01-10 00:26:17]     "pilotErrorDiag": "",
[2026-01-10 00:26:17]  *** Listing of results directory ***
[2026-01-10 00:26:17] total 785216
[2026-01-10 00:26:17] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:26:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:04 run_atlas
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:04 job.xml
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 14:04 EVNT.47962006._000055.pool.root.1
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:04 start_atlas.sh
[2026-01-10 00:26:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:04 shared
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 14:04 input.tar.gz
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:04 boinc_lockfile
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 14:04 pandaJob.out
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas        57 Jan  9 14:04 setup.sh.local
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas    989372 Jan  9 14:05 agis_schedconf.cvmfs.json
[2026-01-10 00:26:17] drwx------. 5 boincer umatlas      4096 Jan  9 14:05 pilot3
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas       533 Jan 10 00:18 boinc_task_state.xml
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas      6947 Jan 10 00:20 init_data.xml
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas 397103140 Jan 10 00:25 HITS.47962010._000559.pool.root.1
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas      1051 Jan 10 00:25 memory_monitor_summary.json
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas   1721344 Jan 10 00:25 log.47962010._000559.job.log.tgz.1
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas        95 Jan 10 00:25 pilot_heartbeat.json
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas      8575 Jan 10 00:25 heartbeat.json
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:26 boinc_mmap_file
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas        29 Jan 10 00:26 wrapper_checkpoint.txt
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas      5009 Jan 10 00:26 pilotlog.txt
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas   5064182 Jan 10 00:26 log.47962010._000559.job.log.1
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas       353 Jan 10 00:26 output.list
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:26 runtime_log
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas   6809600 Jan 10 00:26 result.tar.gz
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas       663 Jan 10 00:26 U9aLDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMNhKDm54kRSo.diag
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:26 runtime_log.err
[2026-01-10 00:26:17] -rw-r--r--. 1 boincer umatlas     21180 Jan 10 00:26 stderr.txt
[2026-01-10 00:26:17] HITS file was successfully produced:
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas 397103140 Jan 10 00:25 shared/HITS.pool.root.1
[2026-01-10 00:26:17]  *** Contents of shared directory: ***
[2026-01-10 00:26:17] total 775384
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 14:04 ATLAS.root_0
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:04 start_atlas.sh
[2026-01-10 00:26:17] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 14:04 input.tar.gz
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas 397103140 Jan 10 00:25 HITS.pool.root.1
[2026-01-10 00:26:17] -rw-------. 1 boincer umatlas   6809600 Jan 10 00:26 result.tar.gz
00:26:18 (255087): run_atlas exited; CPU time 103110.988326
00:26:18 (255087): called boinc_finish(0)

</stderr_txt>
]]>

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